EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPKIG00000012857 (Gene tree)
Gene ID
111833071
Gene Symbol
srsf1b
Alias
-
Full Name
serine/arginine-rich splicing factor 1B
Gene Type
protein_coding
Species
Paramormyrops_kingsleyae
Status
putative
Strand
Plus strand
Length
3973 bases
Position
chrPGUA01000432.1:203261-207233
Accession
111833071
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPKIP00000033077RRM_1PF00076.225e-3312
ENSPKIP00000033077RRM_1PF00076.225e-3322
ENSPKIP00000032975RRM_1PF00076.225.6e-3312
ENSPKIP00000032975RRM_1PF00076.225.6e-3322
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPKIT00000013858-768-ENSPKIP00000032975255 (aa)--
ENSPKIT00000013960-810-ENSPKIP00000033077245 (aa)XP_023646760UPI000CD5F122
Gene Model
Click here to download ENSPKIG00000012857's gene model file
Pathways
Pathway IDPathway NameSource
pki03040SpliceosomeKEGG
pki05168Herpes simplex virus 1 infectionKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000012857's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPKIG00000012857srsf1b9996.311ENSPKIG00000007204srsf1a9996.311
ENSPKIG00000012857srsf1b7270.621ENSPKIG00000024851SRSF96968.362
ENSPKIG00000012857srsf1b6645.763ENSPKIG00000015703-9642.069
ENSPKIG00000012857srsf1b7268.927ENSPKIG00000023787srsf97267.797
ENSPKIG00000012857srsf1b6745.251ENSPKIG00000002054srsf5a6342.458
ENSPKIG00000012857srsf1b9341.935ENSPKIG00000018463-6546.479
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPKIG00000012857srsf1b10095.968ENSG00000136450SRSF110098.462Homo_sapiens
ENSPKIG00000012857srsf1b7891.667ENSAPOG00000002748-7889.062Acanthochromis_polyacanthus
ENSPKIG00000012857srsf1b8089.796ENSAPOG00000008542-8188.177Acanthochromis_polyacanthus
ENSPKIG00000012857srsf1b8092.347ENSAMEG00000002635SRSF17993.367Ailuropoda_melanoleuca
ENSPKIG00000012857srsf1b7891.667ENSACIG00000008091srsf1a8389.583Amphilophus_citrinellus
ENSPKIG00000012857srsf1b8089.163ENSAOCG00000000337-8288.177Amphiprion_ocellaris
ENSPKIG00000012857srsf1b7892.188ENSAOCG00000010671-8389.062Amphiprion_ocellaris
ENSPKIG00000012857srsf1b8089.163ENSAPEG00000023352-8188.177Amphiprion_percula
ENSPKIG00000012857srsf1b7892.188ENSAPEG00000009915-8389.062Amphiprion_percula
ENSPKIG00000012857srsf1b7892.188ENSATEG00000022403-7789.062Anabas_testudineus
ENSPKIG00000012857srsf1b8288.119ENSATEG00000021567-8188.776Anabas_testudineus
ENSPKIG00000012857srsf1b10096.774ENSACAG00000005542-10096.774Anolis_carolinensis
ENSPKIG00000012857srsf1b9995.935ENSANAG00000020583-9997.222Aotus_nancymaae
ENSPKIG00000012857srsf1b8169.849ENSANAG00000025417-7569.388Aotus_nancymaae
ENSPKIG00000012857srsf1b7488.725ENSAMXG00000024373-9488.725Astyanax_mexicanus
ENSPKIG00000012857srsf1b9488.703ENSAMXG00000035996srsf1a7993.467Astyanax_mexicanus
ENSPKIG00000012857srsf1b10095.968ENSBTAG00000014766SRSF110095.968Bos_taurus
ENSPKIG00000012857srsf1b8085.714ENSCJAG00000008111-8886.802Callithrix_jacchus
ENSPKIG00000012857srsf1b9995.935ENSCJAG00000041713-9997.222Callithrix_jacchus
ENSPKIG00000012857srsf1b9995.935ENSCAFG00000017430SRSF19795.935Canis_familiaris
ENSPKIG00000012857srsf1b9995.935ENSCAFG00020025632-9795.935Canis_lupus_dingo
ENSPKIG00000012857srsf1b10095.968ENSCHIG00000010787SRSF110095.968Capra_hircus
ENSPKIG00000012857srsf1b9995.935ENSTSYG00000013899-9997.222Carlito_syrichta
ENSPKIG00000012857srsf1b10095.968ENSCPOG00000032681-10095.968Cavia_porcellus
ENSPKIG00000012857srsf1b10095.968ENSCCAG00000029484-9997.222Cebus_capucinus
ENSPKIG00000012857srsf1b9995.935ENSCATG00000042294-9997.222Cercocebus_atys
ENSPKIG00000012857srsf1b10095.968ENSCLAG00000014707-10095.968Chinchilla_lanigera
ENSPKIG00000012857srsf1b9995.122ENSCSAG00000005642-9795.122Chlorocebus_sabaeus
ENSPKIG00000012857srsf1b10095.968ENSCHOG00000001899SRSF110095.968Choloepus_hoffmanni
ENSPKIG00000012857srsf1b10097.177ENSCPBG00000009851-10097.177Chrysemys_picta_bellii
ENSPKIG00000012857srsf1b9995.935ENSCANG00000029726-9997.222Colobus_angolensis_palliatus
ENSPKIG00000012857srsf1b9995.935ENSCGRG00001000670Srsf19795.935Cricetulus_griseus_chok1gshd
ENSPKIG00000012857srsf1b10095.968ENSCGRG00000005590Srsf110095.968Cricetulus_griseus_crigri
ENSPKIG00000012857srsf1b7892.347ENSCSEG00000014272-7892.347Cynoglossus_semilaevis
ENSPKIG00000012857srsf1b8082.547ENSCSEG00000009973-8181.604Cynoglossus_semilaevis
ENSPKIG00000012857srsf1b7892.188ENSCVAG00000018617-7889.062Cyprinodon_variegatus
ENSPKIG00000012857srsf1b7888.718ENSCVAG00000005458-9188.525Cyprinodon_variegatus
ENSPKIG00000012857srsf1b9999.177ENSDARG00000017843srsf1b9999.177Danio_rerio
ENSPKIG00000012857srsf1b9991.765ENSDARG00000057691srsf1a9991.765Danio_rerio
ENSPKIG00000012857srsf1b9995.935ENSDNOG00000011737-9795.935Dasypus_novemcinctus
ENSPKIG00000012857srsf1b10095.968ENSDORG00000015082Srsf110095.968Dipodomys_ordii
ENSPKIG00000012857srsf1b7591.304ENSETEG00000005349-6390.761Echinops_telfairi
ENSPKIG00000012857srsf1b9995.935ENSEASG00005002922-9795.935Equus_asinus_asinus
ENSPKIG00000012857srsf1b10095.968ENSECAG00000016654SRSF110095.968Equus_caballus
ENSPKIG00000012857srsf1b7595.652ENSEEUG00000009255-6395.652Erinaceus_europaeus
ENSPKIG00000012857srsf1b7996.373ENSELUG00000021646srsf1a7796.373Esox_lucius
ENSPKIG00000012857srsf1b9995.935ENSFCAG00000002250-9795.935Felis_catus
ENSPKIG00000012857srsf1b9981.301ENSFALG00000005062-9781.301Ficedula_albicollis
ENSPKIG00000012857srsf1b10095.968ENSFDAG00000010646-10095.968Fukomys_damarensis
ENSPKIG00000012857srsf1b7892.188ENSFHEG00000003174srsf1a8389.062Fundulus_heteroclitus
ENSPKIG00000012857srsf1b9288.444ENSGMOG00000014787-8089.583Gadus_morhua
ENSPKIG00000012857srsf1b10097.177ENSGALG00000005525SRSF110097.177Gallus_gallus
ENSPKIG00000012857srsf1b8087.245ENSGACG00000020621srsf1b8086.224Gasterosteus_aculeatus
ENSPKIG00000012857srsf1b9997.154ENSGAGG00000022965-9797.154Gopherus_agassizii
ENSPKIG00000012857srsf1b9995.935ENSGGOG00000004386SRSF19997.222Gorilla_gorilla
ENSPKIG00000012857srsf1b7891.667ENSHBUG00000016788srsf1a8188.832Haplochromis_burtoni
ENSPKIG00000012857srsf1b8795.814ENSHGLG00000000600-10095.814Heterocephalus_glaber_female
ENSPKIG00000012857srsf1b8795.814ENSHGLG00000000669-10095.814Heterocephalus_glaber_female
ENSPKIG00000012857srsf1b10095.968ENSHGLG00100016906-10095.968Heterocephalus_glaber_male
ENSPKIG00000012857srsf1b7884.772ENSHCOG00000018918srsf1a7787.817Hippocampus_comes
ENSPKIG00000012857srsf1b10098.776ENSIPUG00000008750srsf1b10098.776Ictalurus_punctatus
ENSPKIG00000012857srsf1b7891.457ENSIPUG00000017039srsf1a7993.970Ictalurus_punctatus
ENSPKIG00000012857srsf1b10095.968ENSSTOG00000000243-10095.968Ictidomys_tridecemlineatus
ENSPKIG00000012857srsf1b10095.968ENSJJAG00000000102-10095.968Jaculus_jaculus
ENSPKIG00000012857srsf1b5191.270ENSJJAG00000014464-9591.270Jaculus_jaculus
ENSPKIG00000012857srsf1b7892.708ENSKMAG00000019232srsf1a7892.708Kryptolebias_marmoratus
ENSPKIG00000012857srsf1b8085.500ENSLBEG00000015294-8086.000Labrus_bergylta
ENSPKIG00000012857srsf1b7893.229ENSLBEG00000020864-8390.104Labrus_bergylta
ENSPKIG00000012857srsf1b7994.819ENSLACG00000014160srsf1a7394.819Latimeria_chalumnae
ENSPKIG00000012857srsf1b10097.571ENSLOCG00000005994srsf1a10097.571Lepisosteus_oculatus
ENSPKIG00000012857srsf1b10095.968ENSLAFG00000025743SRSF110095.968Loxodonta_africana
ENSPKIG00000012857srsf1b10095.968ENSMFAG00000040003-9997.222Macaca_fascicularis
ENSPKIG00000012857srsf1b9995.935ENSMMUG00000004725SRSF19997.222Macaca_mulatta
ENSPKIG00000012857srsf1b10087.903ENSMMUG00000003260-9590.306Macaca_mulatta
ENSPKIG00000012857srsf1b10087.500ENSMNEG00000015983-7891.878Macaca_nemestrina
ENSPKIG00000012857srsf1b9995.935ENSMNEG00000027680-9997.222Macaca_nemestrina
ENSPKIG00000012857srsf1b10095.968ENSMLEG00000040509SRSF110095.968Mandrillus_leucophaeus
ENSPKIG00000012857srsf1b10088.259ENSMLEG00000015243-7790.816Mandrillus_leucophaeus
ENSPKIG00000012857srsf1b7892.188ENSMAMG00000018454-7889.062Mastacembelus_armatus
ENSPKIG00000012857srsf1b8089.796ENSMAMG00000019687-8087.755Mastacembelus_armatus
ENSPKIG00000012857srsf1b8095.408ENSMAMG00000019691-8195.408Mastacembelus_armatus
ENSPKIG00000012857srsf1b10095.968ENSMAUG00000021845Srsf110095.968Mesocricetus_auratus
ENSPKIG00000012857srsf1b9995.935ENSMICG00000013639-9997.222Microcebus_murinus
ENSPKIG00000012857srsf1b10095.968ENSMOCG00000001996Srsf110095.968Microtus_ochrogaster
ENSPKIG00000012857srsf1b7893.229ENSMMOG00000014354srsf1a8390.104Mola_mola
ENSPKIG00000012857srsf1b7595.676ENSMODG00000014781-6395.676Monodelphis_domestica
ENSPKIG00000012857srsf1b7891.667ENSMALG00000017129-7588.542Monopterus_albus
ENSPKIG00000012857srsf1b8378.325ENSMALG00000007763-7979.592Monopterus_albus
ENSPKIG00000012857srsf1b10095.968MGP_CAROLIEiJ_G0016943Srsf110095.968Mus_caroli
ENSPKIG00000012857srsf1b10095.968ENSMUSG00000018379Srsf110095.968Mus_musculus
ENSPKIG00000012857srsf1b10095.968MGP_PahariEiJ_G0018074Srsf110095.968Mus_pahari
ENSPKIG00000012857srsf1b10095.968MGP_SPRETEiJ_G0017790Srsf110095.968Mus_spretus
ENSPKIG00000012857srsf1b10095.968ENSMPUG00000015369SRSF110095.968Mustela_putorius_furo
ENSPKIG00000012857srsf1b8286.139ENSMLUG00000023995-7986.735Myotis_lucifugus
ENSPKIG00000012857srsf1b10095.968ENSMLUG00000011040SRSF110095.968Myotis_lucifugus
ENSPKIG00000012857srsf1b10095.968ENSNGAG00000011395Srsf110095.968Nannospalax_galili
ENSPKIG00000012857srsf1b10083.673ENSNBRG00000008041srsf1b8081.122Neolamprologus_brichardi
ENSPKIG00000012857srsf1b9995.935ENSNLEG00000008088-9997.222Nomascus_leucogenys
ENSPKIG00000012857srsf1b5191.339ENSMEUG00000002783-10090.551Notamacropus_eugenii
ENSPKIG00000012857srsf1b7395.082ENSOPRG00000001234-10095.082Ochotona_princeps
ENSPKIG00000012857srsf1b10095.565ENSODEG00000011481-10095.565Octodon_degus
ENSPKIG00000012857srsf1b7891.667ENSONIG00000013160-7888.832Oreochromis_niloticus
ENSPKIG00000012857srsf1b9692.735ENSONIG00000004860-8195.408Oreochromis_niloticus
ENSPKIG00000012857srsf1b10070.120ENSOCUG00000010894-7772.680Oryctolagus_cuniculus
ENSPKIG00000012857srsf1b7892.188ENSORLG00000004580srsf1a7889.062Oryzias_latipes
ENSPKIG00000012857srsf1b7892.188ENSORLG00020009456srsf1a8389.062Oryzias_latipes_hni
ENSPKIG00000012857srsf1b7892.188ENSORLG00015014384srsf1a8389.062Oryzias_latipes_hsok
ENSPKIG00000012857srsf1b7190.286ENSOMEG00000004106srsf1a7186.857Oryzias_melastigma
ENSPKIG00000012857srsf1b10095.968ENSOGAG00000025950-10095.968Otolemur_garnettii
ENSPKIG00000012857srsf1b10092.713ENSOARG00000008323SRSF110092.713Ovis_aries
ENSPKIG00000012857srsf1b10095.968ENSPPAG00000043403-9997.222Pan_paniscus
ENSPKIG00000012857srsf1b10095.968ENSPPRG00000004238-10095.968Panthera_pardus
ENSPKIG00000012857srsf1b9995.935ENSPTRG00000049077SRSF19997.222Pan_troglodytes
ENSPKIG00000012857srsf1b9995.935ENSPANG00000022305-9997.222Papio_anubis
ENSPKIG00000012857srsf1b9973.251ENSPANG00000030275-7569.231Papio_anubis
ENSPKIG00000012857srsf1b8086.432ENSPSIG00000009000-7897.222Pelodiscus_sinensis
ENSPKIG00000012857srsf1b8087.179ENSPMGG00000005467-7984.264Periophthalmus_magnuspinnatus
ENSPKIG00000012857srsf1b7889.583ENSPMGG00000013112-8288.021Periophthalmus_magnuspinnatus
ENSPKIG00000012857srsf1b10095.968ENSPEMG00000021416Srsf110095.968Peromyscus_maniculatus_bairdii
ENSPKIG00000012857srsf1b10095.984ENSPCIG00000006076-10095.984Phascolarctos_cinereus
ENSPKIG00000012857srsf1b8088.889ENSPFOG00000018325-7089.175Poecilia_formosa
ENSPKIG00000012857srsf1b8088.889ENSPLAG00000008416srsf1b7989.175Poecilia_latipinna
ENSPKIG00000012857srsf1b5090.164ENSPMEG00000020607-9887.705Poecilia_mexicana
ENSPKIG00000012857srsf1b5090.164ENSPMEG00000014312-9887.705Poecilia_mexicana
ENSPKIG00000012857srsf1b8088.889ENSPMEG00000002388-7989.175Poecilia_mexicana
ENSPKIG00000012857srsf1b7892.188ENSPREG00000009667srsf1a7889.062Poecilia_reticulata
ENSPKIG00000012857srsf1b10095.968ENSPPYG00000008240SRSF110095.968Pongo_abelii
ENSPKIG00000012857srsf1b10095.968ENSPCAG00000005199SRSF110095.968Procavia_capensis
ENSPKIG00000012857srsf1b8176.238ENSPCOG00000025736-9575.897Propithecus_coquereli
ENSPKIG00000012857srsf1b10095.968ENSPCOG00000023654-9997.222Propithecus_coquereli
ENSPKIG00000012857srsf1b7598.462ENSPVAG00000000519-7598.462Pteropus_vampyrus
ENSPKIG00000012857srsf1b10097.959ENSPNAG00000014601srsf1b10097.959Pygocentrus_nattereri
ENSPKIG00000012857srsf1b9492.275ENSPNAG00000022241srsf1a7893.782Pygocentrus_nattereri
ENSPKIG00000012857srsf1b10095.968ENSRNOG00000050323Srsf110095.968Rattus_norvegicus
ENSPKIG00000012857srsf1b9995.935ENSRBIG00000034445-9997.222Rhinopithecus_bieti
ENSPKIG00000012857srsf1b10095.968ENSRROG00000041506-9997.222Rhinopithecus_roxellana
ENSPKIG00000012857srsf1b10095.968ENSSBOG00000025377-9997.222Saimiri_boliviensis_boliviensis
ENSPKIG00000012857srsf1b10095.984ENSSHAG00000002552-10095.984Sarcophilus_harrisii
ENSPKIG00000012857srsf1b9997.561ENSSFOG00015004800srsf1a9997.561Scleropages_formosus
ENSPKIG00000012857srsf1b8087.745ENSSMAG00000009719-8087.745Scophthalmus_maximus
ENSPKIG00000012857srsf1b7892.708ENSSMAG00000007018-7889.583Scophthalmus_maximus
ENSPKIG00000012857srsf1b7893.229ENSSDUG00000011303-8390.104Seriola_dumerili
ENSPKIG00000012857srsf1b10077.510ENSSDUG00000003929-8484.500Seriola_dumerili
ENSPKIG00000012857srsf1b8079.695ENSSLDG00000016868-7882.741Seriola_lalandi_dorsalis
ENSPKIG00000012857srsf1b7893.229ENSSLDG00000010543-7890.104Seriola_lalandi_dorsalis
ENSPKIG00000012857srsf1b9578.112ENSSLDG00000016895-7887.097Seriola_lalandi_dorsalis
ENSPKIG00000012857srsf1b7595.652ENSSARG00000010949-6395.652Sorex_araneus
ENSPKIG00000012857srsf1b9997.154ENSSPUG00000000804-9797.154Sphenodon_punctatus
ENSPKIG00000012857srsf1b8086.603ENSSPAG00000014152-8186.603Stegastes_partitus
ENSPKIG00000012857srsf1b7892.188ENSSPAG00000022562-7892.188Stegastes_partitus
ENSPKIG00000012857srsf1b10095.968ENSSSCG00000017626-10095.968Sus_scrofa
ENSPKIG00000012857srsf1b7496.739ENSTGUG00000008416-10096.739Taeniopygia_guttata
ENSPKIG00000012857srsf1b7891.667ENSTRUG00000003691srsf1a7888.542Takifugu_rubripes
ENSPKIG00000012857srsf1b7891.667ENSTNIG00000016223srsf1a7987.817Tetraodon_nigroviridis
ENSPKIG00000012857srsf1b7590.217ENSTBEG00000015378-6392.935Tupaia_belangeri
ENSPKIG00000012857srsf1b7395.082ENSTTRG00000007310SRSF110095.082Tursiops_truncatus
ENSPKIG00000012857srsf1b10095.968ENSUAMG00000009858SRSF110095.968Ursus_americanus
ENSPKIG00000012857srsf1b9995.935ENSUMAG00000000455-9795.935Ursus_maritimus
ENSPKIG00000012857srsf1b10095.565ENSVPAG00000010094SRSF110095.565Vicugna_pacos
ENSPKIG00000012857srsf1b9995.935ENSVVUG00000011882-9795.935Vulpes_vulpes
ENSPKIG00000012857srsf1b10095.565ENSXETG00000008954srsf110089.888Xenopus_tropicalis
ENSPKIG00000012857srsf1b7892.188ENSXMAG00000011766srsf1a7889.062Xiphophorus_maculatus

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