EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000012859 (Gene tree)
Gene ID: 111845559
Gene Symbol: tnrc6a
Alias: -
Full Name: trinucleotide repeat containing 6A
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Plus strand
Length: 33602 bases
Position: chrPGUA01000146.1:681041-714642
Accession: 111845559
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000032994	Ago_hook	PF10427.9	2.6e-11	1	1
ENSPKIP00000033043	Ago_hook	PF10427.9	3e-11	1	1
ENSPKIP00000032969	Ago_hook	PF10427.9	3.4e-11	1	1
ENSPKIP00000033088	Ago_hook	PF10427.9	6e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000013971	-	5729	-	ENSPKIP00000033088	1751 (aa)	-	-
ENSPKIT00000013852	-	5865	-	ENSPKIP00000032969	1835 (aa)	XP_023670830	UPI000CD5E1DE
ENSPKIT00000013926	-	5652	-	ENSPKIP00000033043	1764 (aa)	-	-
ENSPKIT00000013876	-	5727	-	ENSPKIP00000032994	1789 (aa)	-	-

Gene Model

Click here to download ENSPKIG00000012859's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000012859's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000012859	tnrc6a	57	49.460	ENSPKIG00000005428	tnrc6c1	83	50.787

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000012859	tnrc6a	96	79.459	ENSG00000090905	TNRC6A	100	80.625	Homo_sapiens
ENSPKIG00000012859	tnrc6a	99	76.757	ENSAMEG00000009333	TNRC6A	89	75.369	Ailuropoda_melanoleuca
ENSPKIG00000012859	tnrc6a	96	79.891	ENSAPLG00000009978	TNRC6A	91	78.325	Anas_platyrhynchos
ENSPKIG00000012859	tnrc6a	99	44.163	ENSACAG00000011857	TNRC6A	86	60.096	Anolis_carolinensis
ENSPKIG00000012859	tnrc6a	96	79.459	ENSANAG00000025252	TNRC6A	88	75.862	Aotus_nancymaae
ENSPKIG00000012859	tnrc6a	98	78.261	ENSAMXG00000019919	tnrc6a	97	73.394	Astyanax_mexicanus
ENSPKIG00000012859	tnrc6a	96	78.919	ENSBTAG00000017999	TNRC6A	89	75.862	Bos_taurus
ENSPKIG00000012859	tnrc6a	96	79.459	ENSCJAG00000020677	TNRC6A	87	75.862	Callithrix_jacchus
ENSPKIG00000012859	tnrc6a	99	75.862	ENSCAFG00000017531	TNRC6A	88	75.862	Canis_familiaris
ENSPKIG00000012859	tnrc6a	99	58.994	ENSCAFG00020021160	TNRC6A	89	60.883	Canis_lupus_dingo
ENSPKIG00000012859	tnrc6a	99	75.862	ENSCHIG00000019448	TNRC6A	93	75.862	Capra_hircus
ENSPKIG00000012859	tnrc6a	96	78.146	ENSTSYG00000012711	TNRC6A	89	75.862	Carlito_syrichta
ENSPKIG00000012859	tnrc6a	96	79.459	ENSCCAG00000033664	TNRC6A	88	75.862	Cebus_capucinus
ENSPKIG00000012859	tnrc6a	96	79.459	ENSCATG00000019284	TNRC6A	91	78.054	Cercocebus_atys
ENSPKIG00000012859	tnrc6a	95	78.919	ENSCLAG00000010217	TNRC6A	87	73.762	Chinchilla_lanigera
ENSPKIG00000012859	tnrc6a	88	87.952	ENSCHOG00000009374	TNRC6A	79	87.952	Choloepus_hoffmanni
ENSPKIG00000012859	tnrc6a	96	79.459	ENSCANG00000041549	TNRC6A	87	75.862	Colobus_angolensis_palliatus
ENSPKIG00000012859	tnrc6a	99	75.369	ENSCGRG00001015021	Tnrc6a	90	75.369	Cricetulus_griseus_chok1gshd
ENSPKIG00000012859	tnrc6a	99	75.369	ENSCGRG00000013351	Tnrc6a	87	75.369	Cricetulus_griseus_crigri
ENSPKIG00000012859	tnrc6a	99	80.328	ENSDARG00000079688	tnrc6a	97	74.654	Danio_rerio
ENSPKIG00000012859	tnrc6a	99	75.369	ENSDNOG00000013989	TNRC6A	89	75.369	Dasypus_novemcinctus
ENSPKIG00000012859	tnrc6a	93	83.212	ENSETEG00000014658	TNRC6A	86	83.212	Echinops_telfairi
ENSPKIG00000012859	tnrc6a	96	77.925	ENSEASG00005017693	TNRC6A	93	75.369	Equus_asinus_asinus
ENSPKIG00000012859	tnrc6a	95	78.919	ENSECAG00000025056	TNRC6A	93	74.877	Equus_caballus
ENSPKIG00000012859	tnrc6a	99	53.364	ENSEEUG00000004530	TNRC6A	92	50.807	Erinaceus_europaeus
ENSPKIG00000012859	tnrc6a	96	79.459	ENSFCAG00000025236	TNRC6A	90	78.054	Felis_catus
ENSPKIG00000012859	tnrc6a	96	80.978	ENSFALG00000003757	TNRC6A	88	77.833	Ficedula_albicollis
ENSPKIG00000012859	tnrc6a	100	78.325	ENSGAGG00000023209	TNRC6A	96	78.325	Gopherus_agassizii
ENSPKIG00000012859	tnrc6a	96	79.459	ENSGGOG00000005137	TNRC6A	89	75.862	Gorilla_gorilla
ENSPKIG00000012859	tnrc6a	96	66.055	ENSHGLG00000007368	-	89	64.009	Heterocephalus_glaber_female
ENSPKIG00000012859	tnrc6a	98	75.581	ENSHGLG00000012474	-	87	75.581	Heterocephalus_glaber_female
ENSPKIG00000012859	tnrc6a	98	76.786	ENSHGLG00100012496	-	87	76.786	Heterocephalus_glaber_male
ENSPKIG00000012859	tnrc6a	99	66.514	ENSSTOG00000023394	TNRC6A	77	75.862	Ictidomys_tridecemlineatus
ENSPKIG00000012859	tnrc6a	96	79.891	ENSLACG00000006277	TNRC6A	92	75.455	Latimeria_chalumnae
ENSPKIG00000012859	tnrc6a	100	85.644	ENSLOCG00000005517	tnrc6a	86	85.644	Lepisosteus_oculatus
ENSPKIG00000012859	tnrc6a	99	75.862	ENSLAFG00000004209	TNRC6A	89	79.310	Loxodonta_africana
ENSPKIG00000012859	tnrc6a	96	78.146	ENSMFAG00000003824	TNRC6A	88	75.862	Macaca_fascicularis
ENSPKIG00000012859	tnrc6a	96	79.459	ENSMMUG00000020428	TNRC6A	87	75.862	Macaca_mulatta
ENSPKIG00000012859	tnrc6a	99	75.862	ENSMNEG00000034854	TNRC6A	89	78.054	Macaca_nemestrina
ENSPKIG00000012859	tnrc6a	68	48.440	ENSMLEG00000042737	TNRC6A	86	75.862	Mandrillus_leucophaeus
ENSPKIG00000012859	tnrc6a	96	78.509	ENSMGAG00000006455	TNRC6A	87	77.833	Meleagris_gallopavo
ENSPKIG00000012859	tnrc6a	99	75.369	ENSMAUG00000012750	Tnrc6a	87	75.369	Mesocricetus_auratus
ENSPKIG00000012859	tnrc6a	99	75.862	ENSMICG00000030685	TNRC6A	88	75.862	Microcebus_murinus
ENSPKIG00000012859	tnrc6a	99	75.369	ENSMOCG00000000152	Tnrc6a	88	75.369	Microtus_ochrogaster
ENSPKIG00000012859	tnrc6a	99	80.000	ENSMODG00000016348	TNRC6A	85	80.000	Monodelphis_domestica
ENSPKIG00000012859	tnrc6a	99	76.355	MGP_CAROLIEiJ_G0030425	Tnrc6a	99	77.828	Mus_caroli
ENSPKIG00000012859	tnrc6a	99	76.355	ENSMUSG00000052707	Tnrc6a	99	77.828	Mus_musculus
ENSPKIG00000012859	tnrc6a	99	76.355	MGP_PahariEiJ_G0013635	Tnrc6a	95	78.161	Mus_pahari
ENSPKIG00000012859	tnrc6a	99	75.862	MGP_SPRETEiJ_G0031539	Tnrc6a	99	77.376	Mus_spretus
ENSPKIG00000012859	tnrc6a	93	75.638	ENSMPUG00000012324	TNRC6A	91	75.638	Mustela_putorius_furo
ENSPKIG00000012859	tnrc6a	99	75.862	ENSMLUG00000002701	TNRC6A	90	75.862	Myotis_lucifugus
ENSPKIG00000012859	tnrc6a	99	75.862	ENSNGAG00000020702	Tnrc6a	87	75.862	Nannospalax_galili
ENSPKIG00000012859	tnrc6a	96	79.459	ENSNLEG00000011851	TNRC6A	88	79.310	Nomascus_leucogenys
ENSPKIG00000012859	tnrc6a	71	78.818	ENSMEUG00000015959	-	64	78.818	Notamacropus_eugenii
ENSPKIG00000012859	tnrc6a	92	76.493	ENSOPRG00000005819	TNRC6A	86	76.493	Ochotona_princeps
ENSPKIG00000012859	tnrc6a	99	75.369	ENSODEG00000012802	TNRC6A	91	77.602	Octodon_degus
ENSPKIG00000012859	tnrc6a	99	61.339	ENSOCUG00000004325	TNRC6A	92	71.946	Oryctolagus_cuniculus
ENSPKIG00000012859	tnrc6a	96	77.925	ENSOGAG00000006666	TNRC6A	88	75.862	Otolemur_garnettii
ENSPKIG00000012859	tnrc6a	99	75.862	ENSOARG00000017950	TNRC6A	95	75.862	Ovis_aries
ENSPKIG00000012859	tnrc6a	96	79.459	ENSPPAG00000028379	TNRC6A	88	75.862	Pan_paniscus
ENSPKIG00000012859	tnrc6a	96	79.459	ENSPPRG00000005861	TNRC6A	90	78.054	Panthera_pardus
ENSPKIG00000012859	tnrc6a	96	79.459	ENSPTIG00000006346	TNRC6A	90	78.054	Panthera_tigris_altaica
ENSPKIG00000012859	tnrc6a	68	48.440	ENSPTRG00000007898	TNRC6A	88	75.862	Pan_troglodytes
ENSPKIG00000012859	tnrc6a	96	68.212	ENSPANG00000018523	TNRC6A	80	75.862	Papio_anubis
ENSPKIG00000012859	tnrc6a	89	54.517	ENSPSIG00000003965	TNRC6A	100	54.648	Pelodiscus_sinensis
ENSPKIG00000012859	tnrc6a	99	75.862	ENSPEMG00000016318	Tnrc6a	87	75.862	Peromyscus_maniculatus_bairdii
ENSPKIG00000012859	tnrc6a	99	80.000	ENSPCIG00000012106	TNRC6A	90	78.713	Phascolarctos_cinereus
ENSPKIG00000012859	tnrc6a	68	48.165	ENSPPYG00000007202	TNRC6A	87	75.862	Pongo_abelii
ENSPKIG00000012859	tnrc6a	85	87.952	ENSPCAG00000008260	TNRC6A	76	87.952	Procavia_capensis
ENSPKIG00000012859	tnrc6a	94	79.866	ENSPCOG00000010134	TNRC6A	90	78.177	Propithecus_coquereli
ENSPKIG00000012859	tnrc6a	99	76.531	ENSRNOG00000024737	Tnrc6a	87	76.531	Rattus_norvegicus
ENSPKIG00000012859	tnrc6a	96	78.919	ENSRBIG00000014222	TNRC6A	89	75.862	Rhinopithecus_bieti
ENSPKIG00000012859	tnrc6a	89	84.146	ENSRROG00000032360	TNRC6A	81	84.146	Rhinopithecus_roxellana
ENSPKIG00000012859	tnrc6a	96	79.459	ENSSBOG00000036197	TNRC6A	96	75.862	Saimiri_boliviensis_boliviensis
ENSPKIG00000012859	tnrc6a	99	80.000	ENSSHAG00000008811	TNRC6A	94	80.000	Sarcophilus_harrisii
ENSPKIG00000012859	tnrc6a	100	86.634	ENSSFOG00015008920	tnrc6a	97	86.634	Scleropages_formosus
ENSPKIG00000012859	tnrc6a	66	71.698	ENSSARG00000002479	TNRC6A	75	71.698	Sorex_araneus
ENSPKIG00000012859	tnrc6a	99	79.570	ENSSPUG00000010525	TNRC6A	96	76.847	Sphenodon_punctatus
ENSPKIG00000012859	tnrc6a	99	75.862	ENSSSCG00000038870	TNRC6A	96	75.862	Sus_scrofa
ENSPKIG00000012859	tnrc6a	96	78.982	ENSTGUG00000006142	TNRC6A	88	76.847	Taeniopygia_guttata
ENSPKIG00000012859	tnrc6a	93	83.212	ENSTBEG00000014965	TNRC6A	87	83.212	Tupaia_belangeri
ENSPKIG00000012859	tnrc6a	90	76.355	ENSTTRG00000002008	TNRC6A	80	62.691	Tursiops_truncatus
ENSPKIG00000012859	tnrc6a	84	49.671	ENSUAMG00000006656	-	85	50.953	Ursus_americanus
ENSPKIG00000012859	tnrc6a	99	75.862	ENSUMAG00000008274	TNRC6A	96	75.862	Ursus_maritimus
ENSPKIG00000012859	tnrc6a	99	75.862	ENSVVUG00000005380	TNRC6A	93	75.862	Vulpes_vulpes
ENSPKIG00000012859	tnrc6a	99	60.985	ENSXETG00000030437	TNRC6A	96	60.985	Xenopus_tropicalis