EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000013014 (Gene tree)
Gene ID: 111847866
Gene Symbol: -
Alias: -
Full Name: RNA polymerase II subunit J
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Plus strand
Length: 1802 bases
Position: chrPGUA01000173.1:227723-229524
Accession: 111847866
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000033233	RNA_pol_L_2	PF13656.6	4e-29	1	1
ENSPKIP00000033221	RNA_pol_L_2	PF13656.6	9.7e-18	1	1
ENSPKIP00000033233	RNA_pol_L	PF01193.24	1.4e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000014119	-	867	-	ENSPKIP00000033233	117 (aa)	XP_023675220	UPI0007ACFFEF
ENSPKIT00000014107	-	1242	-	ENSPKIP00000033221	145 (aa)	-	-

Gene Model

Click here to download ENSPKIG00000013014's gene model file

Pathways

Pathway ID	Pathway Name	Source
pki03020	RNA polymerase	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000013014's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000013014	-	92	34.259	ENSPKIG00000021891	polr1d	66	34.259

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000013014	-	100	88.976	ENSANAG00000020385	-	100	88.976	Aotus_nancymaae
ENSPKIG00000013014	-	100	96.581	ENSBTAG00000005446	POLR2J	100	96.581	Bos_taurus
ENSPKIG00000013014	-	100	96.581	ENSCAFG00020013154	-	100	96.581	Canis_lupus_dingo
ENSPKIG00000013014	-	100	96.581	ENSCHIG00000009008	-	100	96.581	Capra_hircus
ENSPKIG00000013014	-	96	88.393	ENSCAPG00000013625	-	96	88.393	Cavia_aperea
ENSPKIG00000013014	-	100	96.581	ENSCCAG00000029378	-	100	96.581	Cebus_capucinus
ENSPKIG00000013014	-	50	98.305	ENSCHOG00000008325	-	54	98.305	Choloepus_hoffmanni
ENSPKIG00000013014	-	85	95.000	ENSCPBG00000027774	-	84	95.000	Chrysemys_picta_bellii
ENSPKIG00000013014	-	100	96.581	ENSECAG00000022750	-	100	96.581	Equus_caballus
ENSPKIG00000013014	-	77	93.333	ENSGGOG00000038950	-	52	93.333	Gorilla_gorilla
ENSPKIG00000013014	-	61	81.690	ENSGGOG00000003934	-	85	81.944	Gorilla_gorilla
ENSPKIG00000013014	-	96	54.464	ENSGGOG00000043186	-	80	79.221	Gorilla_gorilla
ENSPKIG00000013014	-	54	90.476	ENSLACG00000022567	-	60	90.476	Latimeria_chalumnae
ENSPKIG00000013014	-	98	89.565	ENSMFAG00000039168	-	92	96.117	Macaca_fascicularis
ENSPKIG00000013014	-	100	96.581	ENSMLEG00000033262	-	100	96.581	Mandrillus_leucophaeus
ENSPKIG00000013014	-	100	96.581	ENSMICG00000010323	-	100	96.581	Microcebus_murinus
ENSPKIG00000013014	-	100	96.581	ENSPTRG00000019132	-	100	96.581	Pan_troglodytes
ENSPKIG00000013014	-	91	73.832	ENSPTRG00000050290	-	87	85.714	Pan_troglodytes
ENSPKIG00000013014	-	77	71.111	ENSPTRG00000052689	-	56	71.111	Pan_troglodytes
ENSPKIG00000013014	-	59	84.058	ENSPTRG00000028611	-	71	75.294	Pan_troglodytes
ENSPKIG00000013014	-	100	79.487	ENSPANG00000015179	-	91	96.203	Papio_anubis
ENSPKIG00000013014	-	92	95.370	ENSPCAG00000003269	-	62	95.370	Procavia_capensis
ENSPKIG00000013014	-	100	96.581	ENSRBIG00000042413	-	100	96.581	Rhinopithecus_bieti
ENSPKIG00000013014	-	100	87.597	ENSRROG00000035578	-	96	95.327	Rhinopithecus_roxellana
ENSPKIG00000013014	-	76	95.506	ENSTTRG00000014846	-	63	95.506	Tursiops_truncatus
ENSPKIG00000013014	-	91	71.963	ENSVPAG00000007077	-	69	64.228	Vicugna_pacos
ENSPKIG00000013014	-	100	96.581	ENSVVUG00000023727	-	100	96.581	Vulpes_vulpes