EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPKIG00000013098 (Gene tree)
Gene ID: 111834419
Gene Symbol: exosc10
Alias: -
Full Name: spermidine synthase
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Plus strand
Length: 26058 bases
Position: chrPGUA01000049.1:1479358-1505415
Accession: 111834419
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000033348	HRDC	PF00570.23	3.6e-09	1	1
ENSPKIP00000033348	PMC2NT	PF08066.12	9.8e-22	1	1
ENSPKIP00000033348	DNA_pol_A_exo1	PF01612.20	1.8e-45	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000014317	-	2385	-	ENSPKIP00000033427	290 (aa)	XP_023649460	UPI000CD63C7D
ENSPKIT00000014309	-	921	-	ENSPKIP00000033419	306 (aa)	-	-
ENSPKIT00000014238	-	3624	-	ENSPKIP00000033348	908 (aa)	-	-

Gene Model

Click here to download ENSPKIG00000013098's gene model file

Pathways

Pathway ID	Pathway Name	Source
pki00270	Cysteine and methionine metabolism	KEGG
pki00330	Arginine and proline metabolism	KEGG
pki00410	beta-Alanine metabolism	KEGG
pki00480	Glutathione metabolism	KEGG
pki01100	Metabolic pathways	KEGG
pki03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000013098's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000013098	exosc10	97	60.135	ENSG00000171824	EXOSC10	99	59.347	Homo_sapiens
ENSPKIG00000013098	exosc10	96	69.829	ENSAPOG00000013304	exosc10	98	69.714	Acanthochromis_polyacanthus
ENSPKIG00000013098	exosc10	98	59.247	ENSAMEG00000009546	EXOSC10	100	59.025	Ailuropoda_melanoleuca
ENSPKIG00000013098	exosc10	93	63.423	ENSACIG00000020455	exosc10	97	63.306	Amphilophus_citrinellus
ENSPKIG00000013098	exosc10	96	64.490	ENSAOCG00000018823	exosc10	97	63.959	Amphiprion_ocellaris
ENSPKIG00000013098	exosc10	96	69.521	ENSAPEG00000017786	exosc10	97	69.521	Amphiprion_percula
ENSPKIG00000013098	exosc10	98	68.116	ENSATEG00000017271	exosc10	100	67.559	Anabas_testudineus
ENSPKIG00000013098	exosc10	94	58.545	ENSAPLG00000006652	EXOSC10	98	58.410	Anas_platyrhynchos
ENSPKIG00000013098	exosc10	97	56.187	ENSANAG00000031112	EXOSC10	99	55.393	Aotus_nancymaae
ENSPKIG00000013098	exosc10	96	69.989	ENSACLG00000025226	exosc10	100	68.708	Astatotilapia_calliptera
ENSPKIG00000013098	exosc10	95	66.478	ENSAMXG00000014510	exosc10	97	66.176	Astyanax_mexicanus
ENSPKIG00000013098	exosc10	76	63.376	ENSBTAG00000002590	EXOSC10	99	63.376	Bos_taurus
ENSPKIG00000013098	exosc10	62	36.760	WBGene00000796	crn-3	63	36.411	Caenorhabditis_elegans
ENSPKIG00000013098	exosc10	97	58.797	ENSCJAG00000002327	EXOSC10	99	58.586	Callithrix_jacchus
ENSPKIG00000013098	exosc10	96	60.547	ENSCAFG00000016721	EXOSC10	95	60.205	Canis_familiaris
ENSPKIG00000013098	exosc10	96	60.547	ENSCAFG00020002481	EXOSC10	95	60.205	Canis_lupus_dingo
ENSPKIG00000013098	exosc10	97	57.046	ENSCHIG00000020022	EXOSC10	99	57.046	Capra_hircus
ENSPKIG00000013098	exosc10	96	56.527	ENSTSYG00000006937	EXOSC10	98	55.973	Carlito_syrichta
ENSPKIG00000013098	exosc10	94	59.838	ENSCAPG00000006494	EXOSC10	99	59.144	Cavia_aperea
ENSPKIG00000013098	exosc10	98	59.468	ENSCPOG00000011628	EXOSC10	100	57.270	Cavia_porcellus
ENSPKIG00000013098	exosc10	97	55.222	ENSCCAG00000023223	EXOSC10	100	58.578	Cebus_capucinus
ENSPKIG00000013098	exosc10	96	60.637	ENSCATG00000039000	EXOSC10	90	68.114	Cercocebus_atys
ENSPKIG00000013098	exosc10	97	59.484	ENSCLAG00000005283	EXOSC10	99	59.035	Chinchilla_lanigera
ENSPKIG00000013098	exosc10	96	60.319	ENSCSAG00000000788	EXOSC10	98	59.407	Chlorocebus_sabaeus
ENSPKIG00000013098	exosc10	83	62.024	ENSCHOG00000012713	EXOSC10	86	62.024	Choloepus_hoffmanni
ENSPKIG00000013098	exosc10	98	59.081	ENSCPBG00000022004	EXOSC10	100	58.972	Chrysemys_picta_bellii
ENSPKIG00000013098	exosc10	60	46.964	ENSCSAVG00000009049	-	94	46.964	Ciona_savignyi
ENSPKIG00000013098	exosc10	97	59.529	ENSCANG00000042813	EXOSC10	99	58.632	Colobus_angolensis_palliatus
ENSPKIG00000013098	exosc10	97	59.843	ENSCGRG00001018469	Exosc10	99	59.551	Cricetulus_griseus_chok1gshd
ENSPKIG00000013098	exosc10	97	59.618	ENSCGRG00000002278	Exosc10	99	59.326	Cricetulus_griseus_crigri
ENSPKIG00000013098	exosc10	98	67.226	ENSCSEG00000005346	exosc10	98	66.890	Cynoglossus_semilaevis
ENSPKIG00000013098	exosc10	95	69.045	ENSCVAG00000016429	exosc10	100	67.039	Cyprinodon_variegatus
ENSPKIG00000013098	exosc10	95	66.591	ENSDARG00000037708	exosc10	98	66.036	Danio_rerio
ENSPKIG00000013098	exosc10	96	59.326	ENSDNOG00000011301	EXOSC10	99	58.824	Dasypus_novemcinctus
ENSPKIG00000013098	exosc10	96	57.662	ENSDORG00000003769	Exosc10	98	57.775	Dipodomys_ordii
ENSPKIG00000013098	exosc10	64	40.165	FBgn0038269	Rrp6	64	40.165	Drosophila_melanogaster
ENSPKIG00000013098	exosc10	91	58.662	ENSETEG00000000830	EXOSC10	97	58.254	Echinops_telfairi
ENSPKIG00000013098	exosc10	70	35.606	ENSEBUG00000004395	exosc10	99	35.294	Eptatretus_burgeri
ENSPKIG00000013098	exosc10	95	60.481	ENSEASG00005018716	EXOSC10	94	69.504	Equus_asinus_asinus
ENSPKIG00000013098	exosc10	96	60.499	ENSECAG00000011639	EXOSC10	98	60.296	Equus_caballus
ENSPKIG00000013098	exosc10	68	62.279	ENSEEUG00000001166	EXOSC10	72	62.279	Erinaceus_europaeus
ENSPKIG00000013098	exosc10	95	68.822	ENSELUG00000012870	exosc10	95	68.512	Esox_lucius
ENSPKIG00000013098	exosc10	98	58.954	ENSFCAG00000000052	EXOSC10	100	58.287	Felis_catus
ENSPKIG00000013098	exosc10	98	57.582	ENSFALG00000010287	EXOSC10	100	57.143	Ficedula_albicollis
ENSPKIG00000013098	exosc10	98	59.556	ENSFDAG00000002942	EXOSC10	100	59.000	Fukomys_damarensis
ENSPKIG00000013098	exosc10	97	67.756	ENSFHEG00000010678	exosc10	99	67.381	Fundulus_heteroclitus
ENSPKIG00000013098	exosc10	81	71.698	ENSGMOG00000006131	exosc10	88	71.698	Gadus_morhua
ENSPKIG00000013098	exosc10	95	58.476	ENSGALG00000003086	EXOSC10	99	56.955	Gallus_gallus
ENSPKIG00000013098	exosc10	97	66.554	ENSGAFG00000019222	exosc10	100	66.629	Gambusia_affinis
ENSPKIG00000013098	exosc10	95	67.048	ENSGACG00000007037	exosc10	97	66.590	Gasterosteus_aculeatus
ENSPKIG00000013098	exosc10	98	59.006	ENSGAGG00000000251	EXOSC10	100	59.191	Gopherus_agassizii
ENSPKIG00000013098	exosc10	97	60.473	ENSGGOG00000010572	EXOSC10	99	59.572	Gorilla_gorilla
ENSPKIG00000013098	exosc10	96	63.708	ENSHBUG00000020328	exosc10	97	63.708	Haplochromis_burtoni
ENSPKIG00000013098	exosc10	98	59.378	ENSHGLG00000011944	EXOSC10	100	58.889	Heterocephalus_glaber_female
ENSPKIG00000013098	exosc10	98	59.378	ENSHGLG00100014444	EXOSC10	100	58.889	Heterocephalus_glaber_male
ENSPKIG00000013098	exosc10	95	66.782	ENSHCOG00000016164	exosc10	97	66.551	Hippocampus_comes
ENSPKIG00000013098	exosc10	97	65.376	ENSIPUG00000021971	exosc10	100	64.815	Ictalurus_punctatus
ENSPKIG00000013098	exosc10	96	60.204	ENSSTOG00000005459	EXOSC10	99	59.239	Ictidomys_tridecemlineatus
ENSPKIG00000013098	exosc10	95	59.864	ENSJJAG00000013716	Exosc10	100	58.361	Jaculus_jaculus
ENSPKIG00000013098	exosc10	96	68.879	ENSKMAG00000015540	exosc10	98	68.535	Kryptolebias_marmoratus
ENSPKIG00000013098	exosc10	96	68.343	ENSLBEG00000022229	exosc10	97	68.343	Labrus_bergylta
ENSPKIG00000013098	exosc10	98	62.000	ENSLACG00000016691	EXOSC10	100	61.487	Latimeria_chalumnae
ENSPKIG00000013098	exosc10	98	68.479	ENSLOCG00000006443	exosc10	99	68.222	Lepisosteus_oculatus
ENSPKIG00000013098	exosc10	97	59.529	ENSLAFG00000016894	EXOSC10	99	59.326	Loxodonta_africana
ENSPKIG00000013098	exosc10	99	59.235	ENSMFAG00000038874	EXOSC10	99	58.470	Macaca_fascicularis
ENSPKIG00000013098	exosc10	96	60.523	ENSMMUG00000019322	EXOSC10	98	59.727	Macaca_mulatta
ENSPKIG00000013098	exosc10	96	60.523	ENSMNEG00000035812	EXOSC10	98	59.727	Macaca_nemestrina
ENSPKIG00000013098	exosc10	96	60.637	ENSMLEG00000025160	EXOSC10	98	59.727	Mandrillus_leucophaeus
ENSPKIG00000013098	exosc10	95	67.898	ENSMAMG00000019375	exosc10	97	67.667	Mastacembelus_armatus
ENSPKIG00000013098	exosc10	96	69.989	ENSMZEG00005013730	exosc10	100	68.708	Maylandia_zebra
ENSPKIG00000013098	exosc10	94	58.391	ENSMGAG00000004665	EXOSC10	99	58.391	Meleagris_gallopavo
ENSPKIG00000013098	exosc10	64	67.406	ENSMAUG00000019261	Exosc10	95	67.406	Mesocricetus_auratus
ENSPKIG00000013098	exosc10	96	60.865	ENSMICG00000003858	EXOSC10	98	60.182	Microcebus_murinus
ENSPKIG00000013098	exosc10	65	67.568	ENSMOCG00000016509	Exosc10	95	67.568	Microtus_ochrogaster
ENSPKIG00000013098	exosc10	98	64.358	ENSMMOG00000009265	exosc10	99	64.022	Mola_mola
ENSPKIG00000013098	exosc10	95	60.069	ENSMODG00000011194	EXOSC10	99	59.393	Monodelphis_domestica
ENSPKIG00000013098	exosc10	96	67.543	ENSMALG00000021322	exosc10	98	67.200	Monopterus_albus
ENSPKIG00000013098	exosc10	96	59.453	MGP_CAROLIEiJ_G0026802	Exosc10	95	67.065	Mus_caroli
ENSPKIG00000013098	exosc10	96	59.112	ENSMUSG00000017264	Exosc10	95	66.894	Mus_musculus
ENSPKIG00000013098	exosc10	96	59.909	MGP_PahariEiJ_G0029150	Exosc10	94	67.698	Mus_pahari
ENSPKIG00000013098	exosc10	96	59.226	MGP_SPRETEiJ_G0027795	Exosc10	95	66.894	Mus_spretus
ENSPKIG00000013098	exosc10	98	59.247	ENSMPUG00000016434	EXOSC10	97	58.416	Mustela_putorius_furo
ENSPKIG00000013098	exosc10	95	60.364	ENSMLUG00000004276	EXOSC10	98	59.529	Myotis_lucifugus
ENSPKIG00000013098	exosc10	96	60.023	ENSNGAG00000023829	Exosc10	98	59.478	Nannospalax_galili
ENSPKIG00000013098	exosc10	96	65.636	ENSNBRG00000006256	exosc10	97	65.178	Neolamprologus_brichardi
ENSPKIG00000013098	exosc10	96	59.339	ENSNLEG00000009539	EXOSC10	98	59.112	Nomascus_leucogenys
ENSPKIG00000013098	exosc10	70	83.333	ENSMEUG00000007020	-	71	83.333	Notamacropus_eugenii
ENSPKIG00000013098	exosc10	95	60.251	ENSOPRG00000012091	EXOSC10	98	59.567	Ochotona_princeps
ENSPKIG00000013098	exosc10	95	59.748	ENSODEG00000013285	EXOSC10	97	59.748	Octodon_degus
ENSPKIG00000013098	exosc10	83	72.523	ENSONIG00000002322	exosc10	99	71.026	Oreochromis_niloticus
ENSPKIG00000013098	exosc10	95	57.399	ENSOANG00000013322	EXOSC10	97	57.955	Ornithorhynchus_anatinus
ENSPKIG00000013098	exosc10	95	60.091	ENSOCUG00000013039	EXOSC10	98	60.229	Oryctolagus_cuniculus
ENSPKIG00000013098	exosc10	96	68.421	ENSORLG00000005117	exosc10	100	68.603	Oryzias_latipes
ENSPKIG00000013098	exosc10	96	68.535	ENSORLG00020013529	exosc10	98	68.421	Oryzias_latipes_hni
ENSPKIG00000013098	exosc10	96	69.108	ENSORLG00015005525	exosc10	98	68.764	Oryzias_latipes_hsok
ENSPKIG00000013098	exosc10	98	66.741	ENSOMEG00000003337	exosc10	100	66.406	Oryzias_melastigma
ENSPKIG00000013098	exosc10	96	55.518	ENSOGAG00000013662	EXOSC10	99	54.730	Otolemur_garnettii
ENSPKIG00000013098	exosc10	97	59.239	ENSOARG00000003668	EXOSC10	99	59.015	Ovis_aries
ENSPKIG00000013098	exosc10	97	59.797	ENSPPAG00000038356	EXOSC10	99	59.572	Pan_paniscus
ENSPKIG00000013098	exosc10	98	58.843	ENSPPRG00000022976	EXOSC10	100	58.176	Panthera_pardus
ENSPKIG00000013098	exosc10	94	58.178	ENSPTIG00000012735	EXOSC10	98	57.593	Panthera_tigris_altaica
ENSPKIG00000013098	exosc10	97	57.095	ENSPTRG00000000140	EXOSC10	99	56.194	Pan_troglodytes
ENSPKIG00000013098	exosc10	96	59.954	ENSPANG00000026088	EXOSC10	98	59.044	Papio_anubis
ENSPKIG00000013098	exosc10	95	60.046	ENSPSIG00000005078	EXOSC10	96	59.932	Pelodiscus_sinensis
ENSPKIG00000013098	exosc10	63	73.905	ENSPMGG00000022241	exosc10	99	72.619	Periophthalmus_magnuspinnatus
ENSPKIG00000013098	exosc10	76	64.092	ENSPEMG00000007753	Exosc10	97	64.092	Peromyscus_maniculatus_bairdii
ENSPKIG00000013098	exosc10	54	50.101	ENSPMAG00000006909	exosc10	100	50.101	Petromyzon_marinus
ENSPKIG00000013098	exosc10	93	56.095	ENSPCIG00000004840	EXOSC10	92	68.586	Phascolarctos_cinereus
ENSPKIG00000013098	exosc10	95	68.894	ENSPFOG00000004744	exosc10	97	68.664	Poecilia_formosa
ENSPKIG00000013098	exosc10	95	68.779	ENSPLAG00000010253	exosc10	97	68.548	Poecilia_latipinna
ENSPKIG00000013098	exosc10	95	68.779	ENSPMEG00000005740	exosc10	97	68.548	Poecilia_mexicana
ENSPKIG00000013098	exosc10	95	68.433	ENSPREG00000016285	exosc10	97	68.433	Poecilia_reticulata
ENSPKIG00000013098	exosc10	99	58.817	ENSPPYG00000001891	EXOSC10	99	57.941	Pongo_abelii
ENSPKIG00000013098	exosc10	87	52.691	ENSPCAG00000001583	EXOSC10	99	52.381	Procavia_capensis
ENSPKIG00000013098	exosc10	96	60.889	ENSPCOG00000013742	EXOSC10	98	59.977	Propithecus_coquereli
ENSPKIG00000013098	exosc10	98	59.444	ENSPVAG00000014780	EXOSC10	100	58.889	Pteropus_vampyrus
ENSPKIG00000013098	exosc10	96	70.103	ENSPNYG00000007387	exosc10	100	68.820	Pundamilia_nyererei
ENSPKIG00000013098	exosc10	96	64.934	ENSPNAG00000028864	exosc10	100	64.000	Pygocentrus_nattereri
ENSPKIG00000013098	exosc10	96	59.681	ENSRNOG00000010719	Exosc10	98	59.226	Rattus_norvegicus
ENSPKIG00000013098	exosc10	97	53.906	ENSRBIG00000039772	EXOSC10	99	53.013	Rhinopithecus_bieti
ENSPKIG00000013098	exosc10	97	59.843	ENSRROG00000036700	EXOSC10	99	58.949	Rhinopithecus_roxellana
ENSPKIG00000013098	exosc10	59	34.239	YOR001W	-	68	33.515	Saccharomyces_cerevisiae
ENSPKIG00000013098	exosc10	95	55.441	ENSSBOG00000020768	EXOSC10	99	55.212	Saimiri_boliviensis_boliviensis
ENSPKIG00000013098	exosc10	94	58.605	ENSSHAG00000013572	EXOSC10	99	58.974	Sarcophilus_harrisii
ENSPKIG00000013098	exosc10	94	73.543	ENSSFOG00015004512	exosc10	98	73.684	Scleropages_formosus
ENSPKIG00000013098	exosc10	98	67.634	ENSSMAG00000017318	exosc10	97	68.571	Scophthalmus_maximus
ENSPKIG00000013098	exosc10	98	67.893	ENSSDUG00000006646	exosc10	100	67.559	Seriola_dumerili
ENSPKIG00000013098	exosc10	98	67.336	ENSSLDG00000025554	exosc10	100	67.113	Seriola_lalandi_dorsalis
ENSPKIG00000013098	exosc10	76	50.642	ENSSARG00000013171	EXOSC10	95	50.642	Sorex_araneus
ENSPKIG00000013098	exosc10	94	60.116	ENSSPUG00000006844	EXOSC10	95	69.231	Sphenodon_punctatus
ENSPKIG00000013098	exosc10	98	68.116	ENSSPAG00000007053	exosc10	100	68.004	Stegastes_partitus
ENSPKIG00000013098	exosc10	89	59.191	ENSSSCG00000003412	EXOSC10	100	58.946	Sus_scrofa
ENSPKIG00000013098	exosc10	94	58.256	ENSTGUG00000002231	EXOSC10	100	58.304	Taeniopygia_guttata
ENSPKIG00000013098	exosc10	96	65.295	ENSTRUG00000012484	exosc10	97	65.295	Takifugu_rubripes
ENSPKIG00000013098	exosc10	96	67.202	ENSTNIG00000015181	exosc10	100	67.202	Tetraodon_nigroviridis
ENSPKIG00000013098	exosc10	69	70.000	ENSTBEG00000017471	-	70	70.000	Tupaia_belangeri
ENSPKIG00000013098	exosc10	98	59.378	ENSTTRG00000001320	EXOSC10	100	58.824	Tursiops_truncatus
ENSPKIG00000013098	exosc10	91	60.285	ENSUAMG00000014404	EXOSC10	96	60.048	Ursus_americanus
ENSPKIG00000013098	exosc10	96	58.723	ENSUMAG00000023413	EXOSC10	99	63.090	Ursus_maritimus
ENSPKIG00000013098	exosc10	60	70.092	ENSVPAG00000004629	EXOSC10	62	70.092	Vicugna_pacos
ENSPKIG00000013098	exosc10	89	59.828	ENSVVUG00000027116	EXOSC10	100	59.459	Vulpes_vulpes
ENSPKIG00000013098	exosc10	95	52.948	ENSXETG00000006318	exosc10	100	52.208	Xenopus_tropicalis
ENSPKIG00000013098	exosc10	98	66.480	ENSXCOG00000004665	exosc10	100	66.257	Xiphophorus_couchianus
ENSPKIG00000013098	exosc10	98	66.741	ENSXMAG00000011246	exosc10	100	66.741	Xiphophorus_maculatus