EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000013147 (Gene tree)
Gene ID: 111849503
Gene Symbol: srprb
Alias: -
Full Name: SRP receptor subunit beta
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Minus strand
Length: 2460 bases
Position: chrPGUA01000102.1:360156-362615
Accession: 111849503
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000033448	MMR_HSR1	PF01926.23	1.1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000014337	-	1593	-	ENSPKIP00000033448	264 (aa)	XP_023678183	UPI000CD5F52D

Gene Model

Click here to download ENSPKIG00000013147's gene model file

Pathways

Pathway ID	Pathway Name	Source
pki03060	Protein export	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000013147's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000013147	srprb	53	31.429	ENSPKIG00000007118	arl1	72	31.429
ENSPKIG00000013147	srprb	58	30.065	ENSPKIG00000005488	ARF1	87	30.065
ENSPKIG00000013147	srprb	53	30.935	ENSPKIG00000007437	-	72	30.935
ENSPKIG00000013147	srprb	53	31.655	ENSPKIG00000025204	-	72	31.655
ENSPKIG00000013147	srprb	58	30.065	ENSPKIG00000018781	-	78	30.065

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000013147	srprb	95	70.916	ENSAPOG00000021219	srprb	90	70.916	Acanthochromis_polyacanthus
ENSPKIG00000013147	srprb	99	68.914	ENSACIG00000014621	srprb	100	68.914	Amphilophus_citrinellus
ENSPKIG00000013147	srprb	95	71.315	ENSAOCG00000017265	srprb	90	71.315	Amphiprion_ocellaris
ENSPKIG00000013147	srprb	95	71.315	ENSAPEG00000024541	srprb	80	71.315	Amphiprion_percula
ENSPKIG00000013147	srprb	95	72.112	ENSATEG00000014016	srprb	91	72.112	Anabas_testudineus
ENSPKIG00000013147	srprb	95	72.222	ENSACLG00000016748	srprb	91	72.222	Astatotilapia_calliptera
ENSPKIG00000013147	srprb	99	67.416	ENSAMXG00000044118	srprb	100	67.416	Astyanax_mexicanus
ENSPKIG00000013147	srprb	99	68.165	ENSCSEG00000017194	srprb	97	68.165	Cynoglossus_semilaevis
ENSPKIG00000013147	srprb	99	68.539	ENSCVAG00000004221	srprb	100	68.539	Cyprinodon_variegatus
ENSPKIG00000013147	srprb	99	66.292	ENSDARG00000030949	srprb	100	66.292	Danio_rerio
ENSPKIG00000013147	srprb	95	69.323	ENSELUG00000009740	srprb	92	69.323	Esox_lucius
ENSPKIG00000013147	srprb	95	72.112	ENSFHEG00000006004	srprb	94	72.112	Fundulus_heteroclitus
ENSPKIG00000013147	srprb	95	71.713	ENSGMOG00000002081	srprb	93	71.713	Gadus_morhua
ENSPKIG00000013147	srprb	95	70.120	ENSGAFG00000012593	srprb	94	70.120	Gambusia_affinis
ENSPKIG00000013147	srprb	99	70.037	ENSGACG00000009891	srprb	98	70.037	Gasterosteus_aculeatus
ENSPKIG00000013147	srprb	95	72.222	ENSHBUG00000002145	srprb	91	72.222	Haplochromis_burtoni
ENSPKIG00000013147	srprb	95	72.112	ENSHCOG00000007732	srprb	94	72.908	Hippocampus_comes
ENSPKIG00000013147	srprb	95	66.932	ENSIPUG00000004177	srprb	94	66.932	Ictalurus_punctatus
ENSPKIG00000013147	srprb	95	69.721	ENSKMAG00000020736	srprb	94	69.721	Kryptolebias_marmoratus
ENSPKIG00000013147	srprb	99	70.037	ENSLBEG00000021483	srprb	97	70.037	Labrus_bergylta
ENSPKIG00000013147	srprb	95	75.794	ENSLOCG00000009740	srprb	84	76.190	Lepisosteus_oculatus
ENSPKIG00000013147	srprb	95	71.315	ENSMAMG00000011876	srprb	91	71.315	Mastacembelus_armatus
ENSPKIG00000013147	srprb	95	71.825	ENSMZEG00005016621	srprb	97	71.825	Maylandia_zebra
ENSPKIG00000013147	srprb	99	69.549	ENSMMOG00000012550	srprb	98	69.549	Mola_mola
ENSPKIG00000013147	srprb	95	72.400	ENSMALG00000012595	srprb	92	72.400	Monopterus_albus
ENSPKIG00000013147	srprb	69	71.823	ENSNBRG00000004699	srprb	89	64.151	Neolamprologus_brichardi
ENSPKIG00000013147	srprb	95	71.713	ENSONIG00000003788	srprb	74	71.713	Oreochromis_niloticus
ENSPKIG00000013147	srprb	95	70.120	ENSORLG00000006430	srprb	91	70.120	Oryzias_latipes
ENSPKIG00000013147	srprb	95	70.518	ENSORLG00020003413	srprb	91	70.518	Oryzias_latipes_hni
ENSPKIG00000013147	srprb	95	70.518	ENSORLG00015000166	srprb	91	70.518	Oryzias_latipes_hsok
ENSPKIG00000013147	srprb	95	71.713	ENSOMEG00000012735	srprb	91	71.713	Oryzias_melastigma
ENSPKIG00000013147	srprb	99	67.681	ENSPMGG00000014061	srprb	96	67.681	Periophthalmus_magnuspinnatus
ENSPKIG00000013147	srprb	95	70.916	ENSPFOG00000011347	srprb	91	70.916	Poecilia_formosa
ENSPKIG00000013147	srprb	95	71.315	ENSPLAG00000001156	srprb	97	71.315	Poecilia_latipinna
ENSPKIG00000013147	srprb	95	70.518	ENSPMEG00000012169	srprb	97	70.518	Poecilia_mexicana
ENSPKIG00000013147	srprb	95	69.841	ENSPREG00000001449	srprb	97	69.841	Poecilia_reticulata
ENSPKIG00000013147	srprb	95	72.222	ENSPNYG00000005911	srprb	91	72.222	Pundamilia_nyererei
ENSPKIG00000013147	srprb	99	69.288	ENSPNAG00000009983	srprb	100	69.288	Pygocentrus_nattereri
ENSPKIG00000013147	srprb	95	76.587	ENSSFOG00015019355	srprb	94	76.587	Scleropages_formosus
ENSPKIG00000013147	srprb	95	70.916	ENSSMAG00000013202	srprb	91	70.916	Scophthalmus_maximus
ENSPKIG00000013147	srprb	95	71.713	ENSSDUG00000018746	srprb	85	71.713	Seriola_dumerili
ENSPKIG00000013147	srprb	95	71.315	ENSSLDG00000020560	srprb	91	71.315	Seriola_lalandi_dorsalis
ENSPKIG00000013147	srprb	95	70.916	ENSSPAG00000008898	srprb	90	70.916	Stegastes_partitus
ENSPKIG00000013147	srprb	99	67.416	ENSTRUG00000022463	srprb	97	67.416	Takifugu_rubripes
ENSPKIG00000013147	srprb	98	65.399	ENSTNIG00000007725	srprb	100	65.399	Tetraodon_nigroviridis
ENSPKIG00000013147	srprb	95	70.916	ENSXCOG00000012585	srprb	97	70.916	Xiphophorus_couchianus
ENSPKIG00000013147	srprb	95	70.518	ENSXMAG00000028725	srprb	97	70.518	Xiphophorus_maculatus