EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000013397 (Gene tree)
Gene ID: 111852775
Gene Symbol: zgc:101559
Alias: -
Full Name: ras-related protein Rab-33B-like
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Minus strand
Length: 2808 bases
Position: chrPGUA01000246.1:332813-335620
Accession: 111852775
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000033830	MMR_HSR1	PF01926.23	6.1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000014725	-	2099	XM_023829019	ENSPKIP00000033830	237 (aa)	XP_023684787	UPI000CD64D5E

Gene Model

Click here to download ENSPKIG00000013397's gene model file

Pathways

Pathway ID	Pathway Name	Source
pki04140	Autophagy - animal	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000013397's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000013397	zgc:101559	84	39.303	ENSPKIG00000014528	-	96	39.303
ENSPKIG00000013397	zgc:101559	69	40.237	ENSPKIG00000025312	-	73	40.237
ENSPKIG00000013397	zgc:101559	73	39.306	ENSPKIG00000020893	rab11al	79	39.306
ENSPKIG00000013397	zgc:101559	71	34.320	ENSPKIG00000019227	-	68	34.320
ENSPKIG00000013397	zgc:101559	71	47.619	ENSPKIG00000015202	rab30	80	47.619
ENSPKIG00000013397	zgc:101559	73	39.884	ENSPKIG00000008579	rab12	70	39.884
ENSPKIG00000013397	zgc:101559	73	41.040	ENSPKIG00000011703	-	78	41.040
ENSPKIG00000013397	zgc:101559	63	41.611	ENSPKIG00000009021	rab3db	67	41.611
ENSPKIG00000013397	zgc:101559	86	38.537	ENSPKIG00000001237	-	92	38.537
ENSPKIG00000013397	zgc:101559	69	30.994	ENSPKIG00000003511	rasl11b	68	30.994
ENSPKIG00000013397	zgc:101559	73	41.040	ENSPKIG00000001389	-	55	41.040
ENSPKIG00000013397	zgc:101559	87	35.407	ENSPKIG00000024232	-	98	35.407
ENSPKIG00000013397	zgc:101559	71	46.429	ENSPKIG00000016450	rab1ba	81	46.429
ENSPKIG00000013397	zgc:101559	62	39.456	ENSPKIG00000001593	rab15	68	39.456
ENSPKIG00000013397	zgc:101559	80	38.660	ENSPKIG00000007864	-	88	38.660
ENSPKIG00000013397	zgc:101559	72	42.105	ENSPKIG00000009578	rab5ab	77	42.105
ENSPKIG00000013397	zgc:101559	84	35.500	ENSPKIG00000018584	rab41	92	35.500
ENSPKIG00000013397	zgc:101559	69	42.012	ENSPKIG00000021143	-	80	42.012
ENSPKIG00000013397	zgc:101559	72	36.842	ENSPKIG00000004103	rab22a	83	39.869
ENSPKIG00000013397	zgc:101559	70	32.335	ENSPKIG00000024310	rab23	89	32.086
ENSPKIG00000013397	zgc:101559	76	34.637	ENSPKIG00000019449	KRAS	92	34.637
ENSPKIG00000013397	zgc:101559	84	40.476	ENSPKIG00000020795	rab39bb	96	40.476
ENSPKIG00000013397	zgc:101559	87	61.429	ENSPKIG00000001765	rab33a	89	61.429
ENSPKIG00000013397	zgc:101559	73	41.040	ENSPKIG00000011640	rab11bb	78	41.040
ENSPKIG00000013397	zgc:101559	63	39.474	ENSPKIG00000021975	rab36	60	39.474
ENSPKIG00000013397	zgc:101559	84	36.000	ENSPKIG00000014618	-	93	36.000
ENSPKIG00000013397	zgc:101559	71	46.429	ENSPKIG00000004714	rab1ab	83	46.386
ENSPKIG00000013397	zgc:101559	72	40.588	ENSPKIG00000004170	-	77	40.588
ENSPKIG00000013397	zgc:101559	78	32.086	ENSPKIG00000015234	-	89	32.086
ENSPKIG00000013397	zgc:101559	66	35.669	ENSPKIG00000025491	-	87	36.471
ENSPKIG00000013397	zgc:101559	71	46.429	ENSPKIG00000003902	RAB1B	77	46.429
ENSPKIG00000013397	zgc:101559	68	33.333	ENSPKIG00000009416	nras	89	33.908
ENSPKIG00000013397	zgc:101559	78	57.609	ENSPKIG00000013084	rab33ba	81	57.609
ENSPKIG00000013397	zgc:101559	84	59.204	ENSPKIG00000025682	RAB33B	93	59.204
ENSPKIG00000013397	zgc:101559	69	42.073	ENSPKIG00000005764	RAB2A	83	42.138
ENSPKIG00000013397	zgc:101559	64	35.714	ENSPKIG00000020212	rab9a	76	35.714
ENSPKIG00000013397	zgc:101559	76	43.646	ENSPKIG00000018888	si:dkey-16l2.16	85	43.646
ENSPKIG00000013397	zgc:101559	62	32.667	ENSPKIG00000005039	dnajc27	81	32.667
ENSPKIG00000013397	zgc:101559	84	33.500	ENSPKIG00000003261	-	94	33.500
ENSPKIG00000013397	zgc:101559	83	39.394	ENSPKIG00000010291	RAB5A	89	39.394
ENSPKIG00000013397	zgc:101559	62	31.293	ENSPKIG00000013982	rheb	79	31.293
ENSPKIG00000013397	zgc:101559	71	35.119	ENSPKIG00000013507	hrasb	92	35.556
ENSPKIG00000013397	zgc:101559	72	33.684	ENSPKIG00000014623	rab9b	86	33.684
ENSPKIG00000013397	zgc:101559	73	39.884	ENSPKIG00000007606	rab11a	80	39.884
ENSPKIG00000013397	zgc:101559	86	35.681	ENSPKIG00000025667	-	99	35.681
ENSPKIG00000013397	zgc:101559	73	39.884	ENSPKIG00000015102	-	80	39.884
ENSPKIG00000013397	zgc:101559	71	40.237	ENSPKIG00000020869	rab25a	78	40.237
ENSPKIG00000013397	zgc:101559	70	37.870	ENSPKIG00000021209	si:dkey-34d22.5	75	37.870
ENSPKIG00000013397	zgc:101559	76	45.856	ENSPKIG00000005686	-	85	44.751
ENSPKIG00000013397	zgc:101559	84	32.673	ENSPKIG00000008691	si:dkey-13a21.4	96	32.673
ENSPKIG00000013397	zgc:101559	69	34.911	ENSPKIG00000025372	rabl2	71	34.911
ENSPKIG00000013397	zgc:101559	69	42.073	ENSPKIG00000009739	rab2a	75	42.073
ENSPKIG00000013397	zgc:101559	86	35.784	ENSPKIG00000009825	rab18a	96	35.784
ENSPKIG00000013397	zgc:101559	84	34.928	ENSPKIG00000021215	-	96	34.928
ENSPKIG00000013397	zgc:101559	62	42.953	ENSPKIG00000006695	rab34a	55	42.953
ENSPKIG00000013397	zgc:101559	83	41.624	ENSPKIG00000025079	rab35b	97	41.624
ENSPKIG00000013397	zgc:101559	76	35.556	ENSPKIG00000000303	HRAS	92	35.754
ENSPKIG00000013397	zgc:101559	53	31.206	ENSPKIG00000013373	RASL10B	59	31.206
ENSPKIG00000013397	zgc:101559	63	48.993	ENSPKIG00000016213	-	72	48.993
ENSPKIG00000013397	zgc:101559	72	40.588	ENSPKIG00000006906	rab14	77	40.588
ENSPKIG00000013397	zgc:101559	71	46.429	ENSPKIG00000005049	-	81	46.429
ENSPKIG00000013397	zgc:101559	84	39.500	ENSPKIG00000020112	-	89	39.500
ENSPKIG00000013397	zgc:101559	84	31.250	ENSPKIG00000000892	rasl11a	78	31.250

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000013397	zgc:101559	94	74.554	ENSAPOG00000007503	zgc:101559	96	74.554	Acanthochromis_polyacanthus
ENSPKIG00000013397	zgc:101559	86	76.699	ENSACIG00000021459	zgc:101559	90	76.699	Amphilophus_citrinellus
ENSPKIG00000013397	zgc:101559	94	75.000	ENSAOCG00000024675	zgc:101559	96	75.000	Amphiprion_ocellaris
ENSPKIG00000013397	zgc:101559	94	75.000	ENSAPEG00000005176	zgc:101559	96	75.000	Amphiprion_percula
ENSPKIG00000013397	zgc:101559	86	77.073	ENSATEG00000007761	zgc:101559	88	77.073	Anabas_testudineus
ENSPKIG00000013397	zgc:101559	91	72.811	ENSACLG00000027006	zgc:101559	92	72.811	Astatotilapia_calliptera
ENSPKIG00000013397	zgc:101559	99	71.915	ENSAMXG00000040460	zgc:101559	94	71.915	Astyanax_mexicanus
ENSPKIG00000013397	zgc:101559	98	70.513	ENSCSEG00000006243	zgc:101559	100	70.513	Cynoglossus_semilaevis
ENSPKIG00000013397	zgc:101559	94	70.982	ENSCVAG00000019227	zgc:101559	96	70.982	Cyprinodon_variegatus
ENSPKIG00000013397	zgc:101559	99	69.658	ENSDARG00000003257	zgc:101559	100	69.658	Danio_rerio
ENSPKIG00000013397	zgc:101559	85	74.752	ENSFHEG00000011483	zgc:101559	86	74.752	Fundulus_heteroclitus
ENSPKIG00000013397	zgc:101559	78	82.703	ENSGMOG00000011665	zgc:101559	88	82.703	Gadus_morhua
ENSPKIG00000013397	zgc:101559	85	74.752	ENSGAFG00000021202	zgc:101559	86	74.752	Gambusia_affinis
ENSPKIG00000013397	zgc:101559	78	79.032	ENSGACG00000001725	zgc:101559	80	79.032	Gasterosteus_aculeatus
ENSPKIG00000013397	zgc:101559	94	71.429	ENSHBUG00000007827	zgc:101559	96	71.429	Haplochromis_burtoni
ENSPKIG00000013397	zgc:101559	84	74.500	ENSHCOG00000009133	zgc:101559	85	74.500	Hippocampus_comes
ENSPKIG00000013397	zgc:101559	94	72.973	ENSIPUG00000022394	zgc:101559	95	72.973	Ictalurus_punctatus
ENSPKIG00000013397	zgc:101559	86	77.561	ENSKMAG00000002862	zgc:101559	87	77.561	Kryptolebias_marmoratus
ENSPKIG00000013397	zgc:101559	95	73.894	ENSLBEG00000025798	zgc:101559	97	73.894	Labrus_bergylta
ENSPKIG00000013397	zgc:101559	84	68.657	ENSLACG00000011557	zgc:101559	87	68.657	Latimeria_chalumnae
ENSPKIG00000013397	zgc:101559	98	72.532	ENSLOCG00000005904	zgc:101559	99	72.532	Lepisosteus_oculatus
ENSPKIG00000013397	zgc:101559	86	76.585	ENSMAMG00000017431	zgc:101559	88	76.585	Mastacembelus_armatus
ENSPKIG00000013397	zgc:101559	94	71.429	ENSMZEG00005021778	zgc:101559	96	71.429	Maylandia_zebra
ENSPKIG00000013397	zgc:101559	86	73.659	ENSMMOG00000019779	zgc:101559	88	73.659	Mola_mola
ENSPKIG00000013397	zgc:101559	98	68.803	ENSMALG00000003712	zgc:101559	100	68.803	Monopterus_albus
ENSPKIG00000013397	zgc:101559	98	69.658	ENSNBRG00000002684	zgc:101559	100	69.658	Neolamprologus_brichardi
ENSPKIG00000013397	zgc:101559	94	71.429	ENSONIG00000006715	-	96	71.429	Oreochromis_niloticus
ENSPKIG00000013397	zgc:101559	84	76.000	ENSORLG00000030642	zgc:101559	85	76.000	Oryzias_latipes
ENSPKIG00000013397	zgc:101559	85	75.248	ENSORLG00020012685	zgc:101559	86	75.248	Oryzias_latipes_hni
ENSPKIG00000013397	zgc:101559	84	76.500	ENSORLG00015016047	zgc:101559	85	76.500	Oryzias_latipes_hsok
ENSPKIG00000013397	zgc:101559	84	76.000	ENSOMEG00000013128	zgc:101559	85	76.000	Oryzias_melastigma
ENSPKIG00000013397	zgc:101559	86	74.146	ENSPFOG00000009101	-	88	74.146	Poecilia_formosa
ENSPKIG00000013397	zgc:101559	86	74.146	ENSPLAG00000020627	zgc:101559	88	74.146	Poecilia_latipinna
ENSPKIG00000013397	zgc:101559	86	74.634	ENSPMEG00000010152	zgc:101559	88	74.634	Poecilia_mexicana
ENSPKIG00000013397	zgc:101559	85	74.752	ENSPREG00000007017	zgc:101559	86	74.752	Poecilia_reticulata
ENSPKIG00000013397	zgc:101559	94	71.429	ENSPNYG00000012922	zgc:101559	96	71.429	Pundamilia_nyererei
ENSPKIG00000013397	zgc:101559	99	71.795	ENSPNAG00000017856	zgc:101559	100	71.795	Pygocentrus_nattereri
ENSPKIG00000013397	zgc:101559	98	83.262	ENSSFOG00015006175	zgc:101559	100	83.262	Scleropages_formosus
ENSPKIG00000013397	zgc:101559	94	70.222	ENSSMAG00000002229	zgc:101559	95	70.222	Scophthalmus_maximus
ENSPKIG00000013397	zgc:101559	94	74.107	ENSSDUG00000008151	zgc:101559	96	74.107	Seriola_dumerili
ENSPKIG00000013397	zgc:101559	94	73.661	ENSSLDG00000019214	zgc:101559	96	73.661	Seriola_lalandi_dorsalis
ENSPKIG00000013397	zgc:101559	94	74.554	ENSSPAG00000006404	zgc:101559	96	74.554	Stegastes_partitus
ENSPKIG00000013397	zgc:101559	86	73.171	ENSTRUG00000009903	zgc:101559	88	73.171	Takifugu_rubripes
ENSPKIG00000013397	zgc:101559	86	72.683	ENSTNIG00000015000	zgc:101559	87	72.683	Tetraodon_nigroviridis
ENSPKIG00000013397	zgc:101559	85	75.248	ENSXCOG00000018683	zgc:101559	86	75.248	Xiphophorus_couchianus
ENSPKIG00000013397	zgc:101559	85	75.743	ENSXMAG00000011171	zgc:101559	86	75.743	Xiphophorus_maculatus