EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPKIG00000013703 (Gene tree)
Gene ID: 111844333
Gene Symbol: snrnp48
Alias: -
Full Name: small nuclear ribonucleoprotein U11/U12 subunit 48
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Minus strand
Length: 6932 bases
Position: chrPGUA01000002.1:1412586-1419517
Accession: 111844333
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000034321	zf-U11-48K	PF05253.12	4.8e-08	1	1
ENSPKIP00000034333	zf-U11-48K	PF05253.12	5.3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000015242	-	2109	-	ENSPKIP00000034333	508 (aa)	-	-
ENSPKIT00000015229	-	2226	-	ENSPKIP00000034321	471 (aa)	XP_023668479	UPI000CD5CDC1

Gene Model

Click here to download ENSPKIG00000013703's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000013703's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000013703	snrnp48	70	44.643	ENSG00000168566	SNRNP48	94	45.797	Homo_sapiens
ENSPKIG00000013703	snrnp48	60	61.210	ENSAPOG00000021430	snrnp48	83	60.627	Acanthochromis_polyacanthus
ENSPKIG00000013703	snrnp48	61	48.980	ENSAMEG00000017349	SNRNP48	95	45.536	Ailuropoda_melanoleuca
ENSPKIG00000013703	snrnp48	61	58.621	ENSACIG00000002032	snrnp48	85	55.140	Amphilophus_citrinellus
ENSPKIG00000013703	snrnp48	60	61.566	ENSAOCG00000010562	snrnp48	83	60.976	Amphiprion_ocellaris
ENSPKIG00000013703	snrnp48	60	60.498	ENSAPEG00000003231	snrnp48	83	59.930	Amphiprion_percula
ENSPKIG00000013703	snrnp48	58	62.868	ENSATEG00000020210	snrnp48	93	55.193	Anabas_testudineus
ENSPKIG00000013703	snrnp48	60	49.477	ENSACAG00000002811	SNRNP48	88	49.650	Anolis_carolinensis
ENSPKIG00000013703	snrnp48	70	44.940	ENSANAG00000033538	SNRNP48	94	46.087	Aotus_nancymaae
ENSPKIG00000013703	snrnp48	63	60.535	ENSAMXG00000015309	snrnp48	87	59.866	Astyanax_mexicanus
ENSPKIG00000013703	snrnp48	64	45.773	ENSBTAG00000001123	SNRNP48	92	46.802	Bos_taurus
ENSPKIG00000013703	snrnp48	59	49.474	ENSCJAG00000021330	SNRNP48	94	46.087	Callithrix_jacchus
ENSPKIG00000013703	snrnp48	61	49.153	ENSCAFG00000009574	SNRNP48	79	45.994	Canis_familiaris
ENSPKIG00000013703	snrnp48	61	49.153	ENSCAFG00020013203	SNRNP48	94	45.994	Canis_lupus_dingo
ENSPKIG00000013703	snrnp48	69	46.356	ENSCHIG00000015216	SNRNP48	94	47.399	Capra_hircus
ENSPKIG00000013703	snrnp48	59	48.421	ENSTSYG00000000698	SNRNP48	94	44.928	Carlito_syrichta
ENSPKIG00000013703	snrnp48	66	45.886	ENSCAPG00000006768	SNRNP48	99	46.372	Cavia_aperea
ENSPKIG00000013703	snrnp48	70	45.994	ENSCPOG00000007910	SNRNP48	95	46.154	Cavia_porcellus
ENSPKIG00000013703	snrnp48	70	44.940	ENSCCAG00000035652	SNRNP48	94	46.087	Cebus_capucinus
ENSPKIG00000013703	snrnp48	70	44.643	ENSCATG00000033947	SNRNP48	94	45.217	Cercocebus_atys
ENSPKIG00000013703	snrnp48	59	49.825	ENSCLAG00000003765	SNRNP48	94	46.131	Chinchilla_lanigera
ENSPKIG00000013703	snrnp48	70	45.238	ENSCSAG00000007409	SNRNP48	94	45.797	Chlorocebus_sabaeus
ENSPKIG00000013703	snrnp48	63	47.351	ENSCPBG00000019146	SNRNP48	91	46.753	Chrysemys_picta_bellii
ENSPKIG00000013703	snrnp48	50	30.769	ENSCING00000004121	-	70	30.769	Ciona_intestinalis
ENSPKIG00000013703	snrnp48	70	44.940	ENSCANG00000030017	SNRNP48	94	46.087	Colobus_angolensis_palliatus
ENSPKIG00000013703	snrnp48	63	40.850	ENSCGRG00001008805	-	89	40.850	Cricetulus_griseus_chok1gshd
ENSPKIG00000013703	snrnp48	59	49.474	ENSCGRG00001001076	-	94	45.481	Cricetulus_griseus_chok1gshd
ENSPKIG00000013703	snrnp48	59	49.474	ENSCGRG00000007781	Snrnp48	94	45.481	Cricetulus_griseus_crigri
ENSPKIG00000013703	snrnp48	55	57.692	ENSCSEG00000000722	snrnp48	76	57.875	Cynoglossus_semilaevis
ENSPKIG00000013703	snrnp48	76	54.469	ENSCVAG00000019829	snrnp48	90	55.200	Cyprinodon_variegatus
ENSPKIG00000013703	snrnp48	61	60.069	ENSDARG00000039989	snrnp48	89	56.748	Danio_rerio
ENSPKIG00000013703	snrnp48	59	48.780	ENSDNOG00000014978	SNRNP48	94	44.669	Dasypus_novemcinctus
ENSPKIG00000013703	snrnp48	59	48.239	ENSDORG00000015140	Snrnp48	95	43.787	Dipodomys_ordii
ENSPKIG00000013703	snrnp48	59	50.000	ENSEASG00005012021	SNRNP48	94	46.291	Equus_asinus_asinus
ENSPKIG00000013703	snrnp48	59	49.650	ENSECAG00000026937	SNRNP48	94	45.994	Equus_caballus
ENSPKIG00000013703	snrnp48	59	34.859	ENSEEUG00000015437	SNRNP48	94	34.111	Erinaceus_europaeus
ENSPKIG00000013703	snrnp48	62	59.932	ENSELUG00000009766	snrnp48	90	57.187	Esox_lucius
ENSPKIG00000013703	snrnp48	59	50.699	ENSFCAG00000018853	SNRNP48	94	46.243	Felis_catus
ENSPKIG00000013703	snrnp48	53	54.365	ENSFALG00000007797	SNRNP48	88	51.748	Ficedula_albicollis
ENSPKIG00000013703	snrnp48	59	49.648	ENSFDAG00000009231	SNRNP48	94	45.161	Fukomys_damarensis
ENSPKIG00000013703	snrnp48	51	61.826	ENSGMOG00000018599	-	94	56.721	Gadus_morhua
ENSPKIG00000013703	snrnp48	53	54.183	ENSGALG00000013005	SNRNP48	83	54.183	Gallus_gallus
ENSPKIG00000013703	snrnp48	57	62.921	ENSGAFG00000021639	snrnp48	90	56.325	Gambusia_affinis
ENSPKIG00000013703	snrnp48	51	63.598	ENSGACG00000017756	-	91	55.723	Gasterosteus_aculeatus
ENSPKIG00000013703	snrnp48	63	47.020	ENSGAGG00000000865	SNRNP48	95	47.020	Gopherus_agassizii
ENSPKIG00000013703	snrnp48	70	44.940	ENSGGOG00000013220	SNRNP48	94	46.087	Gorilla_gorilla
ENSPKIG00000013703	snrnp48	51	65.145	ENSHBUG00000017066	snrnp48	87	56.790	Haplochromis_burtoni
ENSPKIG00000013703	snrnp48	59	48.601	ENSHGLG00000015241	SNRNP48	94	44.807	Heterocephalus_glaber_female
ENSPKIG00000013703	snrnp48	59	48.601	ENSHGLG00100010027	SNRNP48	94	44.807	Heterocephalus_glaber_male
ENSPKIG00000013703	snrnp48	66	51.746	ENSHCOG00000014066	snrnp48	72	60.000	Hippocampus_comes
ENSPKIG00000013703	snrnp48	59	50.000	ENSSTOG00000014635	SNRNP48	94	46.291	Ictidomys_tridecemlineatus
ENSPKIG00000013703	snrnp48	59	48.582	ENSJJAG00000011495	Snrnp48	95	45.217	Jaculus_jaculus
ENSPKIG00000013703	snrnp48	52	66.122	ENSKMAG00000016514	snrnp48	82	62.766	Kryptolebias_marmoratus
ENSPKIG00000013703	snrnp48	56	63.740	ENSLBEG00000026249	snrnp48	89	57.055	Labrus_bergylta
ENSPKIG00000013703	snrnp48	72	49.568	ENSLACG00000003958	SNRNP48	100	49.568	Latimeria_chalumnae
ENSPKIG00000013703	snrnp48	62	61.224	ENSLOCG00000004187	snrnp48	96	57.485	Lepisosteus_oculatus
ENSPKIG00000013703	snrnp48	59	48.421	ENSLAFG00000011152	SNRNP48	94	45.640	Loxodonta_africana
ENSPKIG00000013703	snrnp48	70	44.940	ENSMFAG00000045216	SNRNP48	94	46.087	Macaca_fascicularis
ENSPKIG00000013703	snrnp48	70	44.940	ENSMMUG00000014785	SNRNP48	94	46.087	Macaca_mulatta
ENSPKIG00000013703	snrnp48	70	45.238	ENSMNEG00000042269	SNRNP48	94	46.377	Macaca_nemestrina
ENSPKIG00000013703	snrnp48	70	44.940	ENSMLEG00000034004	SNRNP48	94	46.087	Mandrillus_leucophaeus
ENSPKIG00000013703	snrnp48	52	65.306	ENSMAMG00000018673	snrnp48	62	65.272	Mastacembelus_armatus
ENSPKIG00000013703	snrnp48	63	49.169	ENSMGAG00000006037	SNRNP48	99	48.837	Meleagris_gallopavo
ENSPKIG00000013703	snrnp48	59	49.123	ENSMAUG00000011944	Snrnp48	94	44.898	Mesocricetus_auratus
ENSPKIG00000013703	snrnp48	59	50.000	ENSMICG00000012497	SNRNP48	94	46.243	Microcebus_murinus
ENSPKIG00000013703	snrnp48	65	46.588	ENSMOCG00000015555	Snrnp48	94	46.588	Microtus_ochrogaster
ENSPKIG00000013703	snrnp48	60	50.174	ENSMODG00000009996	SNRNP48	89	46.802	Monodelphis_domestica
ENSPKIG00000013703	snrnp48	58	58.909	ENSMALG00000005725	snrnp48	89	54.434	Monopterus_albus
ENSPKIG00000013703	snrnp48	67	46.828	MGP_CAROLIEiJ_G0018441	Snrnp48	94	46.356	Mus_caroli
ENSPKIG00000013703	snrnp48	67	46.828	ENSMUSG00000021431	Snrnp48	94	46.356	Mus_musculus
ENSPKIG00000013703	snrnp48	67	46.828	MGP_PahariEiJ_G0019509	Snrnp48	95	46.429	Mus_pahari
ENSPKIG00000013703	snrnp48	63	46.866	MGP_SPRETEiJ_G0019321	Snrnp48	95	47.024	Mus_spretus
ENSPKIG00000013703	snrnp48	59	49.648	ENSNGAG00000004849	Snrnp48	94	45.970	Nannospalax_galili
ENSPKIG00000013703	snrnp48	51	65.145	ENSNBRG00000012127	snrnp48	87	57.099	Neolamprologus_brichardi
ENSPKIG00000013703	snrnp48	70	44.940	ENSNLEG00000011667	SNRNP48	94	46.087	Nomascus_leucogenys
ENSPKIG00000013703	snrnp48	59	47.857	ENSOPRG00000015471	SNRNP48	91	46.382	Ochotona_princeps
ENSPKIG00000013703	snrnp48	67	56.467	ENSONIG00000001520	snrnp48	88	57.276	Oreochromis_niloticus
ENSPKIG00000013703	snrnp48	58	49.286	ENSOCUG00000005168	SNRNP48	94	47.588	Oryctolagus_cuniculus
ENSPKIG00000013703	snrnp48	60	60.638	ENSORLG00000015654	snrnp48	80	60.993	Oryzias_latipes
ENSPKIG00000013703	snrnp48	60	58.865	ENSORLG00020015976	snrnp48	68	59.929	Oryzias_latipes_hni
ENSPKIG00000013703	snrnp48	60	59.220	ENSORLG00015022379	snrnp48	69	60.284	Oryzias_latipes_hsok
ENSPKIG00000013703	snrnp48	60	62.411	ENSOMEG00000022007	snrnp48	80	62.411	Oryzias_melastigma
ENSPKIG00000013703	snrnp48	59	48.951	ENSOGAG00000005275	SNRNP48	95	44.706	Otolemur_garnettii
ENSPKIG00000013703	snrnp48	63	46.078	ENSOARG00000017319	SNRNP48	94	48.148	Ovis_aries
ENSPKIG00000013703	snrnp48	70	44.940	ENSPPAG00000032873	SNRNP48	94	46.087	Pan_paniscus
ENSPKIG00000013703	snrnp48	59	50.526	ENSPPRG00000004283	SNRNP48	94	46.087	Panthera_pardus
ENSPKIG00000013703	snrnp48	52	51.012	ENSPTIG00000013502	SNRNP48	98	45.928	Panthera_tigris_altaica
ENSPKIG00000013703	snrnp48	70	44.940	ENSPTRG00000017703	SNRNP48	94	46.087	Pan_troglodytes
ENSPKIG00000013703	snrnp48	70	44.940	ENSPANG00000000771	SNRNP48	94	46.087	Papio_anubis
ENSPKIG00000013703	snrnp48	60	49.310	ENSPSIG00000002213	SNRNP48	90	48.966	Pelodiscus_sinensis
ENSPKIG00000013703	snrnp48	53	57.874	ENSPMGG00000008120	snrnp48	89	57.769	Periophthalmus_magnuspinnatus
ENSPKIG00000013703	snrnp48	59	50.175	ENSPEMG00000008872	Snrnp48	94	46.064	Peromyscus_maniculatus_bairdii
ENSPKIG00000013703	snrnp48	54	63.529	ENSPFOG00000003578	snrnp48	91	54.624	Poecilia_formosa
ENSPKIG00000013703	snrnp48	52	58.915	ENSPLAG00000002290	snrnp48	89	58.915	Poecilia_latipinna
ENSPKIG00000013703	snrnp48	54	64.314	ENSPMEG00000018033	snrnp48	91	55.202	Poecilia_mexicana
ENSPKIG00000013703	snrnp48	53	64.257	ENSPREG00000018541	snrnp48	90	56.024	Poecilia_reticulata
ENSPKIG00000013703	snrnp48	70	44.345	ENSPPYG00000016209	SNRNP48	94	45.507	Pongo_abelii
ENSPKIG00000013703	snrnp48	52	39.357	ENSPCAG00000011991	SNRNP48	90	38.934	Procavia_capensis
ENSPKIG00000013703	snrnp48	59	48.070	ENSPVAG00000002854	SNRNP48	94	44.638	Pteropus_vampyrus
ENSPKIG00000013703	snrnp48	51	65.145	ENSPNYG00000015399	snrnp48	95	57.099	Pundamilia_nyererei
ENSPKIG00000013703	snrnp48	59	50.526	ENSRNOG00000013756	Snrnp48	94	46.647	Rattus_norvegicus
ENSPKIG00000013703	snrnp48	59	49.474	ENSRBIG00000043856	SNRNP48	89	48.980	Rhinopithecus_bieti
ENSPKIG00000013703	snrnp48	70	44.940	ENSRROG00000043229	SNRNP48	94	46.087	Rhinopithecus_roxellana
ENSPKIG00000013703	snrnp48	70	45.238	ENSSBOG00000019486	SNRNP48	94	46.377	Saimiri_boliviensis_boliviensis
ENSPKIG00000013703	snrnp48	58	50.704	ENSSHAG00000014483	SNRNP48	99	45.983	Sarcophilus_harrisii
ENSPKIG00000013703	snrnp48	54	68.093	ENSSFOG00015006610	snrnp48	98	53.445	Scleropages_formosus
ENSPKIG00000013703	snrnp48	61	60.554	ENSSDUG00000014953	snrnp48	91	56.287	Seriola_dumerili
ENSPKIG00000013703	snrnp48	61	59.862	ENSSLDG00000005989	snrnp48	91	55.689	Seriola_lalandi_dorsalis
ENSPKIG00000013703	snrnp48	59	47.500	ENSSPUG00000006257	SNRNP48	83	46.358	Sphenodon_punctatus
ENSPKIG00000013703	snrnp48	58	62.868	ENSSPAG00000006454	snrnp48	81	62.590	Stegastes_partitus
ENSPKIG00000013703	snrnp48	61	49.829	ENSTGUG00000007575	SNRNP48	92	49.829	Taeniopygia_guttata
ENSPKIG00000013703	snrnp48	53	60.081	ENSTRUG00000007031	snrnp48	98	52.571	Takifugu_rubripes
ENSPKIG00000013703	snrnp48	53	62.651	ENSTNIG00000012977	-	81	59.630	Tetraodon_nigroviridis
ENSPKIG00000013703	snrnp48	53	51.751	ENSTBEG00000015620	SNRNP48	72	51.822	Tupaia_belangeri
ENSPKIG00000013703	snrnp48	58	49.291	ENSTTRG00000016715	SNRNP48	94	45.833	Tursiops_truncatus
ENSPKIG00000013703	snrnp48	61	48.980	ENSUAMG00000003690	SNRNP48	94	45.833	Ursus_americanus
ENSPKIG00000013703	snrnp48	52	52.632	ENSVPAG00000003557	SNRNP48	98	48.065	Vicugna_pacos
ENSPKIG00000013703	snrnp48	61	49.153	ENSVVUG00000004996	SNRNP48	94	45.994	Vulpes_vulpes
ENSPKIG00000013703	snrnp48	61	47.059	ENSXETG00000020447	snrnp48	91	44.073	Xenopus_tropicalis
ENSPKIG00000013703	snrnp48	56	63.774	ENSXMAG00000013595	snrnp48	90	55.848	Xiphophorus_maculatus