EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPKIG00000013972 (Gene tree)
Gene ID: 111840273
Gene Symbol: tsr1
Alias: -
Full Name: TSR1%2C ribosome maturation factor
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Minus strand
Length: 10558 bases
Position: chrPGUA01000767.1:41721-52278
Accession: 111840273
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000034841	AARP2CN	PF08142.12	3.7e-18	1	1
ENSPKIP00000034791	AARP2CN	PF08142.12	4.3e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000015764	-	2394	-	ENSPKIP00000034841	797 (aa)	-	-
ENSPKIT00000015713	-	4058	-	ENSPKIP00000034791	820 (aa)	XP_023660690	UPI000CD5E093

Gene Model

Click here to download ENSPKIG00000013972's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000013972's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000013972	tsr1	99	55.488	ENSG00000167721	TSR1	99	55.244	Homo_sapiens
ENSPKIG00000013972	tsr1	100	73.063	ENSAPOG00000020891	tsr1	100	72.889	Acanthochromis_polyacanthus
ENSPKIG00000013972	tsr1	99	53.724	ENSAMEG00000007599	TSR1	99	53.317	Ailuropoda_melanoleuca
ENSPKIG00000013972	tsr1	100	72.256	ENSACIG00000007090	tsr1	100	72.583	Amphilophus_citrinellus
ENSPKIG00000013972	tsr1	100	72.847	ENSAOCG00000023284	tsr1	100	73.141	Amphiprion_ocellaris
ENSPKIG00000013972	tsr1	93	72.015	ENSAPEG00000008452	tsr1	100	72.458	Amphiprion_percula
ENSPKIG00000013972	tsr1	100	71.429	ENSATEG00000021961	tsr1	100	71.786	Anabas_testudineus
ENSPKIG00000013972	tsr1	91	58.421	ENSAPLG00000013422	TSR1	100	58.589	Anas_platyrhynchos
ENSPKIG00000013972	tsr1	71	48.211	ENSACAG00000000859	TSR1	92	48.041	Anolis_carolinensis
ENSPKIG00000013972	tsr1	99	55.012	ENSANAG00000031071	TSR1	99	55.012	Aotus_nancymaae
ENSPKIG00000013972	tsr1	100	73.045	ENSACLG00000007595	tsr1	99	73.438	Astatotilapia_calliptera
ENSPKIG00000013972	tsr1	52	71.395	ENSAMXG00000008470	tsr1	95	67.382	Astyanax_mexicanus
ENSPKIG00000013972	tsr1	99	55.664	ENSBTAG00000004225	TSR1	99	55.177	Bos_taurus
ENSPKIG00000013972	tsr1	66	31.330	WBGene00022021	Y61A9LA.10	51	31.330	Caenorhabditis_elegans
ENSPKIG00000013972	tsr1	96	39.898	WBGene00006497	tag-151	96	40.075	Caenorhabditis_elegans
ENSPKIG00000013972	tsr1	99	54.156	ENSCJAG00000012456	TSR1	99	54.156	Callithrix_jacchus
ENSPKIG00000013972	tsr1	89	51.752	ENSCAFG00000019273	-	100	55.887	Canis_familiaris
ENSPKIG00000013972	tsr1	99	54.268	ENSCAFG00000002106	-	99	54.268	Canis_familiaris
ENSPKIG00000013972	tsr1	99	54.024	ENSCAFG00020009728	TSR1	99	54.024	Canis_lupus_dingo
ENSPKIG00000013972	tsr1	99	56.059	ENSCHIG00000023935	TSR1	99	55.322	Capra_hircus
ENSPKIG00000013972	tsr1	99	55.134	ENSTSYG00000005468	TSR1	99	55.379	Carlito_syrichta
ENSPKIG00000013972	tsr1	92	54.339	ENSCPOG00000014833	TSR1	99	54.740	Cavia_porcellus
ENSPKIG00000013972	tsr1	92	53.816	ENSCCAG00000028962	TSR1	98	53.816	Cebus_capucinus
ENSPKIG00000013972	tsr1	99	55.623	ENSCATG00000044262	TSR1	99	55.379	Cercocebus_atys
ENSPKIG00000013972	tsr1	99	54.950	ENSCLAG00000005567	TSR1	99	55.087	Chinchilla_lanigera
ENSPKIG00000013972	tsr1	99	55.501	ENSCSAG00000013788	TSR1	99	55.257	Chlorocebus_sabaeus
ENSPKIG00000013972	tsr1	98	56.929	ENSCPBG00000020363	TSR1	97	57.369	Chrysemys_picta_bellii
ENSPKIG00000013972	tsr1	96	46.261	ENSCING00000020658	-	99	45.997	Ciona_intestinalis
ENSPKIG00000013972	tsr1	96	44.981	ENSCSAVG00000001875	-	99	45.605	Ciona_savignyi
ENSPKIG00000013972	tsr1	99	53.459	ENSCANG00000033056	TSR1	99	53.208	Colobus_angolensis_palliatus
ENSPKIG00000013972	tsr1	99	54.332	ENSCGRG00001023942	Tsr1	99	54.501	Cricetulus_griseus_chok1gshd
ENSPKIG00000013972	tsr1	99	52.579	ENSCGRG00000013015	Tsr1	99	52.830	Cricetulus_griseus_crigri
ENSPKIG00000013972	tsr1	100	69.712	ENSCSEG00000013009	tsr1	100	69.712	Cynoglossus_semilaevis
ENSPKIG00000013972	tsr1	99	70.303	ENSCVAG00000000506	tsr1	99	70.424	Cyprinodon_variegatus
ENSPKIG00000013972	tsr1	100	73.971	ENSDARG00000007744	tsr1	100	73.778	Danio_rerio
ENSPKIG00000013972	tsr1	99	55.392	ENSDNOG00000004715	TSR1	99	56.618	Dasypus_novemcinctus
ENSPKIG00000013972	tsr1	99	54.568	ENSDORG00000016371	-	99	54.827	Dipodomys_ordii
ENSPKIG00000013972	tsr1	96	49.413	ENSDORG00000023234	-	99	49.153	Dipodomys_ordii
ENSPKIG00000013972	tsr1	96	43.612	FBgn0037073	Tsr1	96	43.457	Drosophila_melanogaster
ENSPKIG00000013972	tsr1	89	69.508	ENSETEG00000017534	TSR1	88	69.508	Echinops_telfairi
ENSPKIG00000013972	tsr1	94	52.135	ENSEBUG00000013731	TSR1	97	51.746	Eptatretus_burgeri
ENSPKIG00000013972	tsr1	99	55.800	ENSEASG00005009302	TSR1	97	55.390	Equus_asinus_asinus
ENSPKIG00000013972	tsr1	99	55.922	ENSECAG00000009114	TSR1	99	55.446	Equus_caballus
ENSPKIG00000013972	tsr1	99	70.878	ENSELUG00000020984	tsr1	96	71.068	Esox_lucius
ENSPKIG00000013972	tsr1	99	54.890	ENSFCAG00000006313	TSR1	99	54.658	Felis_catus
ENSPKIG00000013972	tsr1	99	58.931	ENSFALG00000006532	TSR1	99	58.333	Ficedula_albicollis
ENSPKIG00000013972	tsr1	99	54.957	ENSFDAG00000006038	TSR1	99	54.851	Fukomys_damarensis
ENSPKIG00000013972	tsr1	100	69.286	ENSFHEG00000003626	tsr1	99	69.773	Fundulus_heteroclitus
ENSPKIG00000013972	tsr1	100	68.171	ENSGMOG00000010336	tsr1	100	68.864	Gadus_morhua
ENSPKIG00000013972	tsr1	100	71.497	ENSGAFG00000012993	tsr1	99	71.223	Gambusia_affinis
ENSPKIG00000013972	tsr1	100	70.681	ENSGACG00000010843	tsr1	100	71.620	Gasterosteus_aculeatus
ENSPKIG00000013972	tsr1	98	57.215	ENSGAGG00000025619	-	99	57.405	Gopherus_agassizii
ENSPKIG00000013972	tsr1	99	55.610	ENSGGOG00000001704	TSR1	99	55.366	Gorilla_gorilla
ENSPKIG00000013972	tsr1	100	73.141	ENSHBUG00000017904	tsr1	100	72.716	Haplochromis_burtoni
ENSPKIG00000013972	tsr1	99	55.080	ENSHGLG00000012806	-	99	55.155	Heterocephalus_glaber_female
ENSPKIG00000013972	tsr1	96	48.642	ENSHGLG00000015688	-	98	48.383	Heterocephalus_glaber_female
ENSPKIG00000013972	tsr1	99	55.080	ENSHGLG00100015392	TSR1	99	55.155	Heterocephalus_glaber_male
ENSPKIG00000013972	tsr1	100	71.731	ENSHCOG00000001432	tsr1	100	71.731	Hippocampus_comes
ENSPKIG00000013972	tsr1	100	70.251	ENSIPUG00000004618	tsr1	100	71.087	Ictalurus_punctatus
ENSPKIG00000013972	tsr1	99	55.147	ENSSTOG00000011819	TSR1	99	55.025	Ictidomys_tridecemlineatus
ENSPKIG00000013972	tsr1	91	53.571	ENSJJAG00000019505	Tsr1	96	53.217	Jaculus_jaculus
ENSPKIG00000013972	tsr1	100	70.948	ENSKMAG00000005763	tsr1	99	71.188	Kryptolebias_marmoratus
ENSPKIG00000013972	tsr1	100	71.480	ENSLBEG00000021823	tsr1	99	71.480	Labrus_bergylta
ENSPKIG00000013972	tsr1	99	58.343	ENSLACG00000002197	TSR1	99	58.323	Latimeria_chalumnae
ENSPKIG00000013972	tsr1	90	85.333	ENSLOCG00000006491	TSR1	98	85.333	Lepisosteus_oculatus
ENSPKIG00000013972	tsr1	99	55.623	ENSMFAG00000021330	TSR1	99	55.379	Macaca_fascicularis
ENSPKIG00000013972	tsr1	99	55.501	ENSMMUG00000017519	TSR1	99	55.257	Macaca_mulatta
ENSPKIG00000013972	tsr1	99	55.990	ENSMNEG00000031382	TSR1	99	55.746	Macaca_nemestrina
ENSPKIG00000013972	tsr1	99	55.501	ENSMLEG00000036733	TSR1	99	55.257	Mandrillus_leucophaeus
ENSPKIG00000013972	tsr1	100	71.564	ENSMAMG00000017918	tsr1	99	71.734	Mastacembelus_armatus
ENSPKIG00000013972	tsr1	100	73.438	ENSMZEG00005007477	tsr1	100	73.077	Maylandia_zebra
ENSPKIG00000013972	tsr1	99	57.837	ENSMGAG00000005576	TSR1	99	57.702	Meleagris_gallopavo
ENSPKIG00000013972	tsr1	99	55.951	ENSMICG00000012943	TSR1	99	55.460	Microcebus_murinus
ENSPKIG00000013972	tsr1	99	53.960	ENSMOCG00000022764	Tsr1	99	53.846	Microtus_ochrogaster
ENSPKIG00000013972	tsr1	100	72.169	ENSMMOG00000014280	tsr1	100	72.563	Mola_mola
ENSPKIG00000013972	tsr1	99	55.941	ENSMODG00000010658	TSR1	99	55.802	Monodelphis_domestica
ENSPKIG00000013972	tsr1	100	71.685	ENSMALG00000011681	tsr1	100	71.924	Monopterus_albus
ENSPKIG00000013972	tsr1	99	54.568	MGP_CAROLIEiJ_G0016727	Tsr1	99	54.244	Mus_caroli
ENSPKIG00000013972	tsr1	99	54.523	ENSMUSG00000038335	Tsr1	99	54.198	Mus_musculus
ENSPKIG00000013972	tsr1	99	54.890	MGP_PahariEiJ_G0017864	Tsr1	99	54.568	Mus_pahari
ENSPKIG00000013972	tsr1	99	54.645	MGP_SPRETEiJ_G0017570	Tsr1	99	54.321	Mus_spretus
ENSPKIG00000013972	tsr1	81	57.164	ENSMPUG00000013000	TSR1	100	56.773	Mustela_putorius_furo
ENSPKIG00000013972	tsr1	99	56.410	ENSMLUG00000003505	TSR1	99	55.556	Myotis_lucifugus
ENSPKIG00000013972	tsr1	100	73.086	ENSNBRG00000020728	tsr1	99	73.174	Neolamprologus_brichardi
ENSPKIG00000013972	tsr1	96	64.804	ENSNLEG00000017184	TSR1	99	53.266	Nomascus_leucogenys
ENSPKIG00000013972	tsr1	99	51.792	ENSMEUG00000015828	TSR1	99	52.163	Notamacropus_eugenii
ENSPKIG00000013972	tsr1	100	73.735	ENSONIG00000013131	tsr1	100	73.325	Oreochromis_niloticus
ENSPKIG00000013972	tsr1	95	54.016	ENSOANG00000008637	TSR1	100	53.756	Ornithorhynchus_anatinus
ENSPKIG00000013972	tsr1	99	55.718	ENSOCUG00000014256	TSR1	99	55.231	Oryctolagus_cuniculus
ENSPKIG00000013972	tsr1	100	70.574	ENSORLG00000004926	tsr1	99	71.292	Oryzias_latipes
ENSPKIG00000013972	tsr1	100	70.778	ENSORLG00020008792	tsr1	99	71.497	Oryzias_latipes_hni
ENSPKIG00000013972	tsr1	100	70.455	ENSORLG00015013838	tsr1	99	71.172	Oryzias_latipes_hsok
ENSPKIG00000013972	tsr1	100	71.737	ENSOMEG00000004830	tsr1	99	71.377	Oryzias_melastigma
ENSPKIG00000013972	tsr1	99	54.902	ENSOGAG00000004492	TSR1	99	55.215	Otolemur_garnettii
ENSPKIG00000013972	tsr1	99	56.059	ENSOARG00000015437	TSR1	97	55.569	Ovis_aries
ENSPKIG00000013972	tsr1	99	55.610	ENSPPAG00000036355	TSR1	99	55.366	Pan_paniscus
ENSPKIG00000013972	tsr1	99	54.768	ENSPPRG00000015519	-	99	54.410	Panthera_pardus
ENSPKIG00000013972	tsr1	99	54.890	ENSPTIG00000010608	TSR1	99	54.534	Panthera_tigris_altaica
ENSPKIG00000013972	tsr1	99	55.610	ENSPTRG00000008547	TSR1	99	55.366	Pan_troglodytes
ENSPKIG00000013972	tsr1	99	52.812	ENSPANG00000024463	TSR1	99	53.056	Papio_anubis
ENSPKIG00000013972	tsr1	86	56.540	ENSPSIG00000018258	TSR1	99	57.343	Pelodiscus_sinensis
ENSPKIG00000013972	tsr1	99	71.168	ENSPMGG00000011577	tsr1	99	70.762	Periophthalmus_magnuspinnatus
ENSPKIG00000013972	tsr1	99	53.846	ENSPEMG00000018033	Tsr1	99	53.970	Peromyscus_maniculatus_bairdii
ENSPKIG00000013972	tsr1	99	55.432	ENSPCIG00000009357	TSR1	97	55.501	Phascolarctos_cinereus
ENSPKIG00000013972	tsr1	100	70.638	ENSPFOG00000004483	TSR1	100	71.480	Poecilia_formosa
ENSPKIG00000013972	tsr1	100	71.287	ENSPLAG00000022320	tsr1	100	71.658	Poecilia_latipinna
ENSPKIG00000013972	tsr1	100	70.918	ENSPMEG00000004577	tsr1	99	70.560	Poecilia_mexicana
ENSPKIG00000013972	tsr1	97	71.288	ENSPREG00000010354	tsr1	96	70.660	Poecilia_reticulata
ENSPKIG00000013972	tsr1	99	51.282	ENSPPYG00000007792	TSR1	99	51.038	Pongo_abelii
ENSPKIG00000013972	tsr1	53	69.767	ENSPCAG00000012973	-	71	69.767	Procavia_capensis
ENSPKIG00000013972	tsr1	99	55.112	ENSPCOG00000017928	TSR1	99	55.486	Propithecus_coquereli
ENSPKIG00000013972	tsr1	99	54.963	ENSPVAG00000002162	TSR1	99	55.087	Pteropus_vampyrus
ENSPKIG00000013972	tsr1	100	73.165	ENSPNYG00000016163	tsr1	99	73.558	Pundamilia_nyererei
ENSPKIG00000013972	tsr1	99	72.302	ENSPNAG00000008659	tsr1	99	71.976	Pygocentrus_nattereri
ENSPKIG00000013972	tsr1	99	53.903	ENSRNOG00000002980	Tsr1	99	54.198	Rattus_norvegicus
ENSPKIG00000013972	tsr1	99	55.501	ENSRBIG00000040016	TSR1	99	55.257	Rhinopithecus_bieti
ENSPKIG00000013972	tsr1	99	55.379	ENSRROG00000030361	TSR1	99	55.134	Rhinopithecus_roxellana
ENSPKIG00000013972	tsr1	97	31.303	YDL060W	-	99	30.635	Saccharomyces_cerevisiae
ENSPKIG00000013972	tsr1	99	54.768	ENSSBOG00000020785	TSR1	99	54.715	Saimiri_boliviensis_boliviensis
ENSPKIG00000013972	tsr1	99	55.266	ENSSHAG00000011394	TSR1	99	55.583	Sarcophilus_harrisii
ENSPKIG00000013972	tsr1	100	76.886	ENSSFOG00015005455	tsr1	100	76.679	Scleropages_formosus
ENSPKIG00000013972	tsr1	100	71.292	ENSSMAG00000009504	tsr1	100	71.770	Scophthalmus_maximus
ENSPKIG00000013972	tsr1	100	72.162	ENSSDUG00000012074	tsr1	99	72.640	Seriola_dumerili
ENSPKIG00000013972	tsr1	100	72.335	ENSSLDG00000002031	tsr1	99	72.934	Seriola_lalandi_dorsalis
ENSPKIG00000013972	tsr1	92	56.574	ENSSARG00000000759	TSR1	93	56.574	Sorex_araneus
ENSPKIG00000013972	tsr1	99	58.415	ENSSPUG00000007042	TSR1	99	57.805	Sphenodon_punctatus
ENSPKIG00000013972	tsr1	100	71.838	ENSSPAG00000021951	tsr1	100	72.196	Stegastes_partitus
ENSPKIG00000013972	tsr1	99	55.366	ENSSSCG00000038534	TSR1	99	55.762	Sus_scrofa
ENSPKIG00000013972	tsr1	90	59.517	ENSTGUG00000005883	TSR1	100	60.000	Taeniopygia_guttata
ENSPKIG00000013972	tsr1	100	71.755	ENSTRUG00000004665	tsr1	100	71.549	Takifugu_rubripes
ENSPKIG00000013972	tsr1	99	73.697	ENSTNIG00000016196	tsr1	100	74.069	Tetraodon_nigroviridis
ENSPKIG00000013972	tsr1	66	74.615	ENSTBEG00000015275	-	66	74.615	Tupaia_belangeri
ENSPKIG00000013972	tsr1	99	55.638	ENSTTRG00000001177	TSR1	99	55.886	Tursiops_truncatus
ENSPKIG00000013972	tsr1	99	54.126	ENSUAMG00000025160	TSR1	99	54.126	Ursus_americanus
ENSPKIG00000013972	tsr1	95	53.982	ENSUMAG00000009294	TSR1	98	53.982	Ursus_maritimus
ENSPKIG00000013972	tsr1	83	48.692	ENSVPAG00000000228	TSR1	99	49.548	Vicugna_pacos
ENSPKIG00000013972	tsr1	99	54.024	ENSVVUG00000021767	TSR1	99	54.024	Vulpes_vulpes
ENSPKIG00000013972	tsr1	99	53.098	ENSXETG00000023797	tsr1	99	53.341	Xenopus_tropicalis
ENSPKIG00000013972	tsr1	100	71.807	ENSXCOG00000009635	tsr1	100	72.169	Xiphophorus_couchianus
ENSPKIG00000013972	tsr1	100	71.103	ENSXMAG00000001397	tsr1	97	71.343	Xiphophorus_maculatus