EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000014111 (Gene tree)
Gene ID: 111849219
Gene Symbol: si:dkey-210j14.4
Alias: -
Full Name: RB-associated KRAB zinc finger protein-like
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Minus strand
Length: 4881 bases
Position: chrPGUA01000020.1:941715-946595
Accession: 111849219
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000034979	zf-C2H2	PF00096.26	3.4e-23	1	4
ENSPKIP00000034979	zf-C2H2	PF00096.26	3.4e-23	2	4
ENSPKIP00000034979	zf-C2H2	PF00096.26	3.4e-23	3	4
ENSPKIP00000034979	zf-C2H2	PF00096.26	3.4e-23	4	4
ENSPKIP00000034979	zf-met	PF12874.7	0.00014	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000015904	-	1541	-	ENSPKIP00000034979	392 (aa)	XP_023677687	UPI000CD670EE

Gene Model

Click here to download ENSPKIG00000014111's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000014111's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000014111	si:dkey-210j14.4	52	53.922	ENSPKIG00000009111	-	95	53.922
ENSPKIG00000014111	si:dkey-210j14.4	99	57.692	ENSPKIG00000002670	-	99	57.692
ENSPKIG00000014111	si:dkey-210j14.4	64	46.364	ENSPKIG00000020324	-	54	46.364
ENSPKIG00000014111	si:dkey-210j14.4	97	50.459	ENSPKIG00000019848	-	95	50.459
ENSPKIG00000014111	si:dkey-210j14.4	97	58.182	ENSPKIG00000006616	-	99	58.182

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000014111	si:dkey-210j14.4	97	40.731	ENSDARG00000089883	si:dkey-210j14.3	99	40.992	Danio_rerio