EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPKIG00000014128 (Gene tree)
Gene ID: 111846137
Gene Symbol: prpf18
Alias: -
Full Name: pre-mRNA processing factor 18
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Plus strand
Length: 3568 bases
Position: chrPGUA01000153.1:757279-760846
Accession: 111846137
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000035072	PRP4	PF08799.11	1.4e-13	1	1
ENSPKIP00000035060	PRP4	PF08799.11	1.6e-13	1	1
ENSPKIP00000035042	PRP4	PF08799.11	1.7e-13	1	1
ENSPKIP00000035023	PRP4	PF08799.11	3.7e-13	1	1
ENSPKIP00000035023	Prp18	PF02840.15	3.7e-62	1	1
ENSPKIP00000035072	Prp18	PF02840.15	1.5e-48	1	2
ENSPKIP00000035072	Prp18	PF02840.15	1.5e-48	2	2
ENSPKIP00000035060	Prp18	PF02840.15	2.7e-41	1	2
ENSPKIP00000035060	Prp18	PF02840.15	2.7e-41	2	2
ENSPKIP00000035042	Prp18	PF02840.15	2.9e-41	1	2
ENSPKIP00000035042	Prp18	PF02840.15	2.9e-41	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000015985	-	1278	-	ENSPKIP00000035060	425 (aa)	-	-
ENSPKIT00000015948	-	1104	-	ENSPKIP00000035023	367 (aa)	XP_023671808	UPI000CD61837
ENSPKIT00000015967	-	1305	-	ENSPKIP00000035042	434 (aa)	-	-
ENSPKIT00000015998	-	1167	-	ENSPKIP00000035072	388 (aa)	-	-

Gene Model

Click here to download ENSPKIG00000014128's gene model file

Pathways

Pathway ID	Pathway Name	Source
pki03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000014128's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000014128	prpf18	96	82.336	ENSG00000165630	PRPF18	86	98.113	Homo_sapiens
ENSPKIG00000014128	prpf18	96	87.749	ENSAPOG00000024177	prpf18	100	87.749	Acanthochromis_polyacanthus
ENSPKIG00000014128	prpf18	96	81.766	ENSAMEG00000013591	-	86	98.113	Ailuropoda_melanoleuca
ENSPKIG00000014128	prpf18	96	86.325	ENSACIG00000001186	prpf18	100	86.325	Amphilophus_citrinellus
ENSPKIG00000014128	prpf18	94	87.209	ENSAOCG00000006572	prpf18	94	87.172	Amphiprion_ocellaris
ENSPKIG00000014128	prpf18	96	87.464	ENSAPEG00000004564	prpf18	100	87.464	Amphiprion_percula
ENSPKIG00000014128	prpf18	96	86.325	ENSATEG00000000303	prpf18	100	86.325	Anabas_testudineus
ENSPKIG00000014128	prpf18	95	80.516	ENSAPLG00000003387	-	85	98.113	Anas_platyrhynchos
ENSPKIG00000014128	prpf18	96	83.003	ENSACAG00000000818	-	86	98.113	Anolis_carolinensis
ENSPKIG00000014128	prpf18	96	83.476	ENSANAG00000037445	-	90	98.113	Aotus_nancymaae
ENSPKIG00000014128	prpf18	96	85.470	ENSACLG00000026296	prpf18	89	98.182	Astatotilapia_calliptera
ENSPKIG00000014128	prpf18	96	88.319	ENSAMXG00000012848	prpf18	100	88.319	Astyanax_mexicanus
ENSPKIG00000014128	prpf18	96	82.336	ENSBTAG00000017244	PRPF18	86	98.113	Bos_taurus
ENSPKIG00000014128	prpf18	69	66.667	WBGene00009320	F32B6.3	84	66.667	Caenorhabditis_elegans
ENSPKIG00000014128	prpf18	96	83.476	ENSCJAG00000009432	-	88	98.148	Callithrix_jacchus
ENSPKIG00000014128	prpf18	96	81.766	ENSCAFG00000004735	-	86	98.113	Canis_familiaris
ENSPKIG00000014128	prpf18	96	81.766	ENSCAFG00020007712	-	86	98.113	Canis_lupus_dingo
ENSPKIG00000014128	prpf18	96	82.336	ENSCHIG00000000499	-	86	98.113	Capra_hircus
ENSPKIG00000014128	prpf18	96	82.621	ENSTSYG00000003517	-	86	98.113	Carlito_syrichta
ENSPKIG00000014128	prpf18	96	82.906	ENSCPOG00000021069	-	86	98.113	Cavia_porcellus
ENSPKIG00000014128	prpf18	96	83.476	ENSCCAG00000036822	-	90	98.113	Cebus_capucinus
ENSPKIG00000014128	prpf18	71	97.468	ENSCATG00000016633	-	84	98.113	Cercocebus_atys
ENSPKIG00000014128	prpf18	96	82.621	ENSCLAG00000011770	-	86	98.113	Chinchilla_lanigera
ENSPKIG00000014128	prpf18	96	83.191	ENSCSAG00000013109	-	86	98.113	Chlorocebus_sabaeus
ENSPKIG00000014128	prpf18	96	79.726	ENSCPBG00000003100	-	87	98.113	Chrysemys_picta_bellii
ENSPKIG00000014128	prpf18	75	84.906	ENSCING00000020481	-	90	84.906	Ciona_intestinalis
ENSPKIG00000014128	prpf18	75	84.906	ENSCSAVG00000010546	-	91	84.906	Ciona_savignyi
ENSPKIG00000014128	prpf18	96	83.476	ENSCANG00000034900	-	86	98.113	Colobus_angolensis_palliatus
ENSPKIG00000014128	prpf18	96	82.336	ENSCGRG00001023665	Prpf18	86	98.113	Cricetulus_griseus_chok1gshd
ENSPKIG00000014128	prpf18	96	82.336	ENSCGRG00000014690	Prpf18	86	98.113	Cricetulus_griseus_crigri
ENSPKIG00000014128	prpf18	96	85.511	ENSCSEG00000005536	prpf18	100	85.511	Cynoglossus_semilaevis
ENSPKIG00000014128	prpf18	96	86.610	ENSCVAG00000012401	prpf18	100	86.610	Cyprinodon_variegatus
ENSPKIG00000014128	prpf18	96	87.464	ENSDARG00000058306	prpf18	100	87.464	Danio_rerio
ENSPKIG00000014128	prpf18	96	82.051	ENSDNOG00000035607	-	86	98.113	Dasypus_novemcinctus
ENSPKIG00000014128	prpf18	96	81.481	ENSDORG00000000858	Prpf18	86	98.113	Dipodomys_ordii
ENSPKIG00000014128	prpf18	69	92.308	FBgn0027784	Prp18	84	92.308	Drosophila_melanogaster
ENSPKIG00000014128	prpf18	96	75.499	ENSETEG00000015060	-	83	95.556	Echinops_telfairi
ENSPKIG00000014128	prpf18	70	96.296	ENSEBUG00000016502	prpf18	85	96.226	Eptatretus_burgeri
ENSPKIG00000014128	prpf18	96	82.906	ENSEASG00005019373	-	86	98.113	Equus_asinus_asinus
ENSPKIG00000014128	prpf18	96	82.906	ENSECAG00000006997	PRPF18	86	98.113	Equus_caballus
ENSPKIG00000014128	prpf18	60	100.000	ENSEEUG00000001171	-	79	100.000	Erinaceus_europaeus
ENSPKIG00000014128	prpf18	96	86.080	ENSELUG00000022190	prpf18	100	86.080	Esox_lucius
ENSPKIG00000014128	prpf18	96	82.621	ENSFCAG00000004436	-	86	98.113	Felis_catus
ENSPKIG00000014128	prpf18	89	82.154	ENSFALG00000001912	-	91	96.296	Ficedula_albicollis
ENSPKIG00000014128	prpf18	95	57.143	ENSFDAG00000010713	-	81	77.193	Fukomys_damarensis
ENSPKIG00000014128	prpf18	90	84.195	ENSFDAG00000014026	-	100	84.195	Fukomys_damarensis
ENSPKIG00000014128	prpf18	74	90.842	ENSFHEG00000020125	prpf18	98	90.637	Fundulus_heteroclitus
ENSPKIG00000014128	prpf18	95	82.286	ENSGMOG00000012210	prpf18	86	98.113	Gadus_morhua
ENSPKIG00000014128	prpf18	96	82.621	ENSGALG00000043593	-	86	98.113	Gallus_gallus
ENSPKIG00000014128	prpf18	96	85.755	ENSGAFG00000006034	prpf18	86	100.000	Gambusia_affinis
ENSPKIG00000014128	prpf18	96	83.476	ENSGACG00000012232	prpf18	86	98.113	Gasterosteus_aculeatus
ENSPKIG00000014128	prpf18	96	83.191	ENSGAGG00000016878	-	86	98.113	Gopherus_agassizii
ENSPKIG00000014128	prpf18	89	82.154	ENSGGOG00000025188	-	93	87.500	Gorilla_gorilla
ENSPKIG00000014128	prpf18	96	86.610	ENSHBUG00000010264	prpf18	100	86.610	Haplochromis_burtoni
ENSPKIG00000014128	prpf18	96	81.766	ENSHGLG00000018534	PRPF18	86	98.113	Heterocephalus_glaber_female
ENSPKIG00000014128	prpf18	90	83.384	ENSHGLG00100012161	-	84	97.468	Heterocephalus_glaber_male
ENSPKIG00000014128	prpf18	96	86.895	ENSHCOG00000015987	prpf18	100	86.895	Hippocampus_comes
ENSPKIG00000014128	prpf18	96	84.419	ENSIPUG00000007432	prpf18	100	84.703	Ictalurus_punctatus
ENSPKIG00000014128	prpf18	96	82.621	ENSSTOG00000008735	-	86	98.113	Ictidomys_tridecemlineatus
ENSPKIG00000014128	prpf18	96	82.336	ENSJJAG00000024041	-	86	98.113	Jaculus_jaculus
ENSPKIG00000014128	prpf18	96	60.511	ENSJJAG00000015191	-	100	60.511	Jaculus_jaculus
ENSPKIG00000014128	prpf18	96	85.755	ENSKMAG00000012124	prpf18	100	85.755	Kryptolebias_marmoratus
ENSPKIG00000014128	prpf18	96	81.197	ENSLBEG00000028466	prpf18	86	98.113	Labrus_bergylta
ENSPKIG00000014128	prpf18	96	83.761	ENSLACG00000009885	prpf18	100	83.761	Latimeria_chalumnae
ENSPKIG00000014128	prpf18	96	87.464	ENSLOCG00000016736	prpf18	100	87.464	Lepisosteus_oculatus
ENSPKIG00000014128	prpf18	96	82.336	ENSLAFG00000007753	-	86	98.113	Loxodonta_africana
ENSPKIG00000014128	prpf18	96	83.191	ENSMFAG00000000540	-	91	98.148	Macaca_fascicularis
ENSPKIG00000014128	prpf18	96	83.191	ENSMMUG00000015071	PRPF18	91	98.148	Macaca_mulatta
ENSPKIG00000014128	prpf18	96	83.191	ENSMNEG00000024679	-	91	98.148	Macaca_nemestrina
ENSPKIG00000014128	prpf18	96	67.521	ENSMLEG00000031715	-	100	67.521	Mandrillus_leucophaeus
ENSPKIG00000014128	prpf18	96	88.034	ENSMAMG00000006610	prpf18	91	100.000	Mastacembelus_armatus
ENSPKIG00000014128	prpf18	96	86.610	ENSMZEG00005019392	prpf18	100	86.610	Maylandia_zebra
ENSPKIG00000014128	prpf18	96	81.481	ENSMGAG00000005023	-	86	98.113	Meleagris_gallopavo
ENSPKIG00000014128	prpf18	96	83.476	ENSMICG00000006572	-	90	96.296	Microcebus_murinus
ENSPKIG00000014128	prpf18	96	82.336	ENSMOCG00000021468	Prpf18	86	98.113	Microtus_ochrogaster
ENSPKIG00000014128	prpf18	96	85.185	ENSMMOG00000013012	prpf18	100	85.185	Mola_mola
ENSPKIG00000014128	prpf18	96	74.929	ENSMODG00000024043	-	86	96.226	Monodelphis_domestica
ENSPKIG00000014128	prpf18	95	78.736	ENSMODG00000016902	-	85	96.296	Monodelphis_domestica
ENSPKIG00000014128	prpf18	96	78.348	ENSMALG00000005486	prpf18	85	98.113	Monopterus_albus
ENSPKIG00000014128	prpf18	96	82.336	MGP_CAROLIEiJ_G0023143	Prpf18	100	94.521	Mus_caroli
ENSPKIG00000014128	prpf18	96	82.621	ENSMUSG00000039449	Prpf18	100	94.521	Mus_musculus
ENSPKIG00000014128	prpf18	96	82.621	MGP_PahariEiJ_G0019203	Prpf18	100	94.521	Mus_pahari
ENSPKIG00000014128	prpf18	96	82.621	MGP_SPRETEiJ_G0024061	Prpf18	100	94.521	Mus_spretus
ENSPKIG00000014128	prpf18	96	81.766	ENSMPUG00000000938	-	86	98.113	Mustela_putorius_furo
ENSPKIG00000014128	prpf18	96	82.051	ENSMLUG00000009200	-	86	98.113	Myotis_lucifugus
ENSPKIG00000014128	prpf18	54	92.405	ENSNGAG00000023550	-	75	92.405	Nannospalax_galili
ENSPKIG00000014128	prpf18	96	82.336	ENSNGAG00000012500	-	86	98.113	Nannospalax_galili
ENSPKIG00000014128	prpf18	96	85.470	ENSNBRG00000001778	prpf18	100	85.470	Neolamprologus_brichardi
ENSPKIG00000014128	prpf18	96	83.191	ENSNLEG00000012186	-	86	98.113	Nomascus_leucogenys
ENSPKIG00000014128	prpf18	71	74.903	ENSMEUG00000005032	-	84	76.087	Notamacropus_eugenii
ENSPKIG00000014128	prpf18	75	62.044	ENSOPRG00000002153	-	100	62.044	Ochotona_princeps
ENSPKIG00000014128	prpf18	96	81.481	ENSODEG00000003770	-	86	98.113	Octodon_degus
ENSPKIG00000014128	prpf18	94	86.047	ENSONIG00000014854	prpf18	84	98.113	Oreochromis_niloticus
ENSPKIG00000014128	prpf18	96	82.906	ENSOANG00000015404	-	86	98.113	Ornithorhynchus_anatinus
ENSPKIG00000014128	prpf18	96	82.051	ENSOCUG00000027756	-	100	80.627	Oryctolagus_cuniculus
ENSPKIG00000014128	prpf18	96	85.755	ENSORLG00000010293	prpf18	100	85.755	Oryzias_latipes
ENSPKIG00000014128	prpf18	96	85.755	ENSORLG00020001530	prpf18	100	85.755	Oryzias_latipes_hni
ENSPKIG00000014128	prpf18	96	85.470	ENSORLG00015013705	prpf18	100	85.470	Oryzias_latipes_hsok
ENSPKIG00000014128	prpf18	96	86.040	ENSOMEG00000009167	prpf18	100	86.040	Oryzias_melastigma
ENSPKIG00000014128	prpf18	96	81.481	ENSOGAG00000007294	-	86	98.113	Otolemur_garnettii
ENSPKIG00000014128	prpf18	96	82.336	ENSOARG00000006243	-	86	98.113	Ovis_aries
ENSPKIG00000014128	prpf18	96	83.191	ENSPPAG00000041959	-	86	98.113	Pan_paniscus
ENSPKIG00000014128	prpf18	96	81.766	ENSPPRG00000000107	-	86	98.113	Panthera_pardus
ENSPKIG00000014128	prpf18	96	81.766	ENSPTIG00000021094	-	86	98.113	Panthera_tigris_altaica
ENSPKIG00000014128	prpf18	96	83.191	ENSPTRG00000002306	PRPF18	86	98.113	Pan_troglodytes
ENSPKIG00000014128	prpf18	96	82.906	ENSPANG00000023346	-	86	98.113	Papio_anubis
ENSPKIG00000014128	prpf18	96	82.906	ENSPSIG00000016064	-	86	98.113	Pelodiscus_sinensis
ENSPKIG00000014128	prpf18	96	79.830	ENSPMGG00000016486	prpf18	85	98.113	Periophthalmus_magnuspinnatus
ENSPKIG00000014128	prpf18	96	82.051	ENSPEMG00000013704	Prpf18	86	98.113	Peromyscus_maniculatus_bairdii
ENSPKIG00000014128	prpf18	96	74.074	ENSPMAG00000000204	prpf18	100	74.074	Petromyzon_marinus
ENSPKIG00000014128	prpf18	89	82.769	ENSPCIG00000012963	-	92	98.148	Phascolarctos_cinereus
ENSPKIG00000014128	prpf18	96	85.470	ENSPFOG00000017611	prpf18	86	100.000	Poecilia_formosa
ENSPKIG00000014128	prpf18	96	84.046	ENSPLAG00000000369	prpf18	86	100.000	Poecilia_latipinna
ENSPKIG00000014128	prpf18	96	85.755	ENSPMEG00000005183	prpf18	86	100.000	Poecilia_mexicana
ENSPKIG00000014128	prpf18	96	84.330	ENSPREG00000015232	prpf18	86	100.000	Poecilia_reticulata
ENSPKIG00000014128	prpf18	96	82.336	ENSPPYG00000002101	PRPF18	86	98.113	Pongo_abelii
ENSPKIG00000014128	prpf18	96	64.672	ENSPCAG00000010833	-	100	64.672	Procavia_capensis
ENSPKIG00000014128	prpf18	96	78.632	ENSPCOG00000013057	-	85	97.468	Propithecus_coquereli
ENSPKIG00000014128	prpf18	96	50.142	ENSPVAG00000002947	-	100	50.142	Pteropus_vampyrus
ENSPKIG00000014128	prpf18	96	86.895	ENSPNYG00000003554	prpf18	100	86.895	Pundamilia_nyererei
ENSPKIG00000014128	prpf18	96	87.464	ENSPNAG00000023151	prpf18	100	87.464	Pygocentrus_nattereri
ENSPKIG00000014128	prpf18	96	82.051	ENSRNOG00000018396	Prpf18	87	98.113	Rattus_norvegicus
ENSPKIG00000014128	prpf18	96	83.761	ENSRBIG00000028028	-	86	98.113	Rhinopithecus_bieti
ENSPKIG00000014128	prpf18	96	83.476	ENSRROG00000040695	-	86	98.113	Rhinopithecus_roxellana
ENSPKIG00000014128	prpf18	96	83.476	ENSSBOG00000034482	-	90	98.113	Saimiri_boliviensis_boliviensis
ENSPKIG00000014128	prpf18	96	69.231	ENSSHAG00000009669	-	86	94.340	Sarcophilus_harrisii
ENSPKIG00000014128	prpf18	96	83.476	ENSSHAG00000016463	-	86	98.113	Sarcophilus_harrisii
ENSPKIG00000014128	prpf18	81	34.494	ENSSFOG00015021154	-	89	51.073	Scleropages_formosus
ENSPKIG00000014128	prpf18	94	89.244	ENSSFOG00015022118	prpf18	100	78.652	Scleropages_formosus
ENSPKIG00000014128	prpf18	96	84.615	ENSSMAG00000005308	prpf18	100	84.615	Scophthalmus_maximus
ENSPKIG00000014128	prpf18	96	88.034	ENSSDUG00000015428	prpf18	100	88.034	Seriola_dumerili
ENSPKIG00000014128	prpf18	96	88.034	ENSSLDG00000023989	prpf18	100	88.034	Seriola_lalandi_dorsalis
ENSPKIG00000014128	prpf18	57	96.154	ENSSARG00000005307	-	65	96.154	Sorex_araneus
ENSPKIG00000014128	prpf18	96	81.766	ENSSPUG00000002619	-	88	98.113	Sphenodon_punctatus
ENSPKIG00000014128	prpf18	96	88.034	ENSSPAG00000019502	prpf18	100	88.034	Stegastes_partitus
ENSPKIG00000014128	prpf18	96	82.621	ENSSSCG00000026354	-	86	98.113	Sus_scrofa
ENSPKIG00000014128	prpf18	96	82.051	ENSTGUG00000002286	-	86	98.113	Taeniopygia_guttata
ENSPKIG00000014128	prpf18	96	83.476	ENSTRUG00000011278	prpf18	86	98.113	Takifugu_rubripes
ENSPKIG00000014128	prpf18	96	84.330	ENSTNIG00000000911	prpf18	100	84.330	Tetraodon_nigroviridis
ENSPKIG00000014128	prpf18	76	98.718	ENSTBEG00000013011	-	79	98.718	Tupaia_belangeri
ENSPKIG00000014128	prpf18	96	82.336	ENSTTRG00000011117	PRPF18	86	98.113	Tursiops_truncatus
ENSPKIG00000014128	prpf18	87	85.000	ENSUAMG00000001815	-	82	97.468	Ursus_americanus
ENSPKIG00000014128	prpf18	96	77.208	ENSUMAG00000012329	-	91	98.113	Ursus_maritimus
ENSPKIG00000014128	prpf18	96	76.353	ENSVPAG00000011486	-	85	94.444	Vicugna_pacos
ENSPKIG00000014128	prpf18	96	82.621	ENSVVUG00000005453	-	86	98.113	Vulpes_vulpes
ENSPKIG00000014128	prpf18	96	76.338	ENSXETG00000024057	prpf18	86	98.113	Xenopus_tropicalis
ENSPKIG00000014128	prpf18	96	84.986	ENSXCOG00000020414	prpf18	90	100.000	Xiphophorus_couchianus
ENSPKIG00000014128	prpf18	96	86.610	ENSXMAG00000004713	prpf18	81	100.000	Xiphophorus_maculatus