EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPKIG00000014162 (Gene tree)
Gene ID: 111838062
Gene Symbol: -
Alias: -
Full Name: pre-mRNA 3'-end-processing factor FIP1-like
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Minus strand
Length: 9755 bases
Position: chrPGUA01000064.1:465555-475309
Accession: 111838062
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000035075	Fip1	PF05182.13	1.5e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000016001	-	1587	-	ENSPKIP00000035075	528 (aa)	XP_023656406	UPI000CD5F79D

Gene Model

Click here to download ENSPKIG00000014162's gene model file

Pathways

Pathway ID	Pathway Name	Source
pki03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000014162's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000014162	-	84	40.784	ENSAPEG00000022229	fip1l1b	52	48.288	Amphiprion_percula
ENSPKIG00000014162	-	96	44.265	ENSATEG00000021757	fip1l1b	52	47.603	Anabas_testudineus
ENSPKIG00000014162	-	84	52.091	ENSAPLG00000008548	-	93	52.846	Anas_platyrhynchos
ENSPKIG00000014162	-	61	39.548	ENSCAPG00000009569	-	61	44.364	Cavia_aperea
ENSPKIG00000014162	-	55	63.787	ENSCPBG00000014849	-	52	64.452	Chrysemys_picta_bellii
ENSPKIG00000014162	-	50	45.238	ENSCPBG00000025019	-	53	42.991	Chrysemys_picta_bellii
ENSPKIG00000014162	-	97	43.649	ENSCSEG00000006583	fip1l1b	52	47.059	Cynoglossus_semilaevis
ENSPKIG00000014162	-	84	44.948	ENSCVAG00000023435	fip1l1b	50	47.872	Cyprinodon_variegatus
ENSPKIG00000014162	-	86	40.326	ENSFHEG00000003843	fip1l1b	50	47.872	Fundulus_heteroclitus
ENSPKIG00000014162	-	54	46.483	ENSGMOG00000004913	fip1l1b	50	42.525	Gadus_morhua
ENSPKIG00000014162	-	84	42.268	ENSGAFG00000008253	fip1l1b	50	45.993	Gambusia_affinis
ENSPKIG00000014162	-	55	62.914	ENSGAGG00000017677	-	81	64.570	Gopherus_agassizii
ENSPKIG00000014162	-	50	45.918	ENSGAGG00000009763	-	57	42.991	Gopherus_agassizii
ENSPKIG00000014162	-	51	49.826	ENSHCOG00000015834	fip1l1b	51	49.831	Hippocampus_comes
ENSPKIG00000014162	-	56	43.438	ENSIPUG00000022454	fip1l1b	56	46.154	Ictalurus_punctatus
ENSPKIG00000014162	-	84	45.435	ENSKMAG00000021938	fip1l1b	50	47.535	Kryptolebias_marmoratus
ENSPKIG00000014162	-	97	37.201	ENSMALG00000000838	fip1l1b	56	38.206	Monopterus_albus
ENSPKIG00000014162	-	97	42.004	ENSONIG00000008785	fip1l1b	52	48.288	Oreochromis_niloticus
ENSPKIG00000014162	-	97	42.729	ENSORLG00000004397	fip1l1b	50	48.571	Oryzias_latipes
ENSPKIG00000014162	-	97	43.011	ENSORLG00020008716	fip1l1b	50	48.929	Oryzias_latipes_hni
ENSPKIG00000014162	-	84	44.885	ENSORLG00015006736	fip1l1b	50	48.929	Oryzias_latipes_hsok
ENSPKIG00000014162	-	97	41.155	ENSPMGG00000017028	fip1l1b	90	40.546	Periophthalmus_magnuspinnatus
ENSPKIG00000014162	-	74	39.815	ENSPFOG00000014745	fip1l1b	50	46.479	Poecilia_formosa
ENSPKIG00000014162	-	73	41.646	ENSPLAG00000010954	fip1l1b	50	46.831	Poecilia_latipinna
ENSPKIG00000014162	-	73	40.482	ENSPMEG00000019187	fip1l1b	50	46.479	Poecilia_mexicana
ENSPKIG00000014162	-	77	38.942	ENSPREG00000012535	fip1l1b	50	41.509	Poecilia_reticulata
ENSPKIG00000014162	-	94	64.637	ENSPNAG00000007456	-	51	67.658	Pygocentrus_nattereri
ENSPKIG00000014162	-	53	45.574	ENSPNAG00000015341	fip1l1b	64	47.931	Pygocentrus_nattereri
ENSPKIG00000014162	-	57	80.000	ENSSFOG00015010948	-	78	82.414	Scleropages_formosus
ENSPKIG00000014162	-	97	40.741	ENSSMAG00000013444	fip1l1b	53	47.586	Scophthalmus_maximus
ENSPKIG00000014162	-	51	48.763	ENSSDUG00000004117	fip1l1b	52	47.945	Seriola_dumerili
ENSPKIG00000014162	-	51	48.043	ENSSLDG00000024099	fip1l1b	52	47.603	Seriola_lalandi_dorsalis
ENSPKIG00000014162	-	51	45.946	ENSSPAG00000017564	fip1l1b	52	45.890	Stegastes_partitus
ENSPKIG00000014162	-	97	39.923	ENSXCOG00000013656	fip1l1b	58	49.057	Xiphophorus_couchianus
ENSPKIG00000014162	-	84	42.680	ENSXMAG00000017620	fip1l1b	50	45.965	Xiphophorus_maculatus