EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000014203 (Gene tree)
Gene ID: 111852754
Gene Symbol: ZIC2 (1 of many)
Alias: -
Full Name: Zic family member 2
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Plus strand
Length: 20827 bases
Position: chrPGUA01000246.1:734528-755354
Accession: 12873
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000035160	zf-C2H2	PF00096.26	1.7e-20	1	3
ENSPKIP00000035160	zf-C2H2	PF00096.26	1.7e-20	2	3
ENSPKIP00000035160	zf-C2H2	PF00096.26	1.7e-20	3	3
ENSPKIP00000035149	zf-C2H2	PF00096.26	1.8e-20	1	3
ENSPKIP00000035149	zf-C2H2	PF00096.26	1.8e-20	2	3
ENSPKIP00000035149	zf-C2H2	PF00096.26	1.8e-20	3	3
ENSPKIP00000035139	zf-C2H2	PF00096.26	6e-13	1	2
ENSPKIP00000035139	zf-C2H2	PF00096.26	6e-13	2	2
ENSPKIP00000035139	zf-met	PF12874.7	1.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000016066	ZIC2 (1 of many)-201	426	-	ENSPKIP00000035139	141 (aa)	-	-
ENSPKIT00000016087	ZIC2 (1 of many)-203	5531	-	ENSPKIP00000035160	445 (aa)	-	-
ENSPKIT00000016076	ZIC2 (1 of many)-202	5617	-	ENSPKIP00000035149	449 (aa)	-	-

Gene Model

Click here to download ENSPKIG00000014203's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000014203's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000014203	ZIC2	50	42.593	ENSPKIG00000015139	znf319b	57	40.698
ENSPKIG00000014203	ZIC2	56	34.783	ENSPKIG00000010773	-	90	37.634
ENSPKIG00000014203	ZIC2	55	37.349	ENSPKIG00000002254	SNAI2	54	37.410
ENSPKIG00000014203	ZIC2	57	35.897	ENSPKIG00000006563	-	98	39.161
ENSPKIG00000014203	ZIC2	58	38.596	ENSPKIG00000012069	-	96	41.509
ENSPKIG00000014203	ZIC2	99	66.740	ENSPKIG00000017705	zic3	99	66.520
ENSPKIG00000014203	ZIC2	65	35.443	ENSPKIG00000015951	-	66	38.750
ENSPKIG00000014203	ZIC2	56	30.488	ENSPKIG00000020324	-	53	33.094
ENSPKIG00000014203	ZIC2	66	34.921	ENSPKIG00000006616	-	56	42.857
ENSPKIG00000014203	ZIC2	66	34.615	ENSPKIG00000002670	-	52	42.708
ENSPKIG00000014203	ZIC2	74	37.705	ENSPKIG00000012290	-	96	48.387
ENSPKIG00000014203	ZIC2	56	36.364	ENSPKIG00000017781	-	62	39.583
ENSPKIG00000014203	ZIC2	57	41.284	ENSPKIG00000009111	-	85	41.284
ENSPKIG00000014203	ZIC2	57	34.118	ENSPKIG00000024718	ovol1a	59	32.407

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000014203	ZIC2	99	46.452	ENSAMXG00000037612	zic2b	100	47.722	Astyanax_mexicanus
ENSPKIG00000014203	ZIC2	62	80.702	ENSMLEG00000039873	ZIC2	100	83.217	Mandrillus_leucophaeus
ENSPKIG00000014203	ZIC2	71	54.819	ENSPNAG00000011062	zic2b	100	45.127	Pygocentrus_nattereri
ENSPKIG00000014203	ZIC2	64	84.354	ENSSHAG00000003850	ZIC2	97	85.570	Sarcophilus_harrisii
ENSPKIG00000014203	ZIC2	67	87.368	ENSTNIG00000017808	-	80	91.262	Tetraodon_nigroviridis