EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000014354 (Gene tree)
Gene ID: 111847904
Gene Symbol: -
Alias: -
Full Name: TATA-binding protein-associated factor 2N-like
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Minus strand
Length: 8218 bases
Position: chrPGUA01000173.1:834996-843213
Accession: 111847904
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000035370	zf-RanBP	PF00641.18	2.4e-09	1	1
ENSPKIP00000035370	RRM_1	PF00076.22	3.8e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000016299	-	1584	XM_023819510	ENSPKIP00000035370	392 (aa)	XP_023675278	UPI000CD63018

Gene Model

Click here to download ENSPKIG00000014354's gene model file

Pathways

Pathway ID	Pathway Name	Source
pki03022	Basal transcription factors	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000014354's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000014354	-	100	58.553	ENSPKIG00000010664	taf15	100	56.674
ENSPKIG00000014354	-	59	54.864	ENSPKIG00000018470	fus	69	51.541

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000014354	-	60	65.966	ENSAMXG00000013126	taf15	99	55.034	Astyanax_mexicanus
ENSPKIG00000014354	-	100	55.718	ENSLOCG00000001615	taf15	100	56.635	Lepisosteus_oculatus
ENSPKIG00000014354	-	86	57.979	ENSPNAG00000001144	taf15	85	65.229	Pygocentrus_nattereri
ENSPKIG00000014354	-	86	78.006	ENSSFOG00015004010	-	100	76.238	Scleropages_formosus
ENSPKIG00000014354	-	100	65.367	ENSSFOG00015004086	taf15	100	64.368	Scleropages_formosus