EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000014471 (Gene tree)
Gene ID: 111850942
Gene Symbol: papola
Alias: -
Full Name: poly(A) polymerase type 3-like
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Plus strand
Length: 16202 bases
Position: chrPGUA01000214.1:464810-481011
Accession: 111850942
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000035555	PAP_RNA-bind	PF04926.15	2.6e-24	1	1
ENSPKIP00000035592	PAP_RNA-bind	PF04926.15	2.7e-24	1	1
ENSPKIP00000035664	PAP_RNA-bind	PF04926.15	2.7e-24	1	1
ENSPKIP00000035721	PAP_RNA-bind	PF04926.15	3e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000016656	-	3755	-	ENSPKIP00000035721	763 (aa)	XP_023681123	UPI000CD66E69
ENSPKIT00000016598	-	3658	-	ENSPKIP00000035664	732 (aa)	-	-
ENSPKIT00000016488	-	4786	-	ENSPKIP00000035555	691 (aa)	-	-
ENSPKIT00000016525	-	4007	-	ENSPKIP00000035592	730 (aa)	XP_023681124	UPI000CD62547

Gene Model

Click here to download ENSPKIG00000014471's gene model file

Pathways

Pathway ID	Pathway Name	Source
pki03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000014471's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000014471	papola	99	59.713	ENSPKIG00000003313	papolg	99	58.808
ENSPKIG00000014471	papola	91	64.643	ENSPKIG00000006027	PAPOLG	77	73.642

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000014471	papola	100	69.909	ENSG00000090060	PAPOLA	94	95.263	Homo_sapiens
ENSPKIG00000014471	papola	99	70.822	ENSAMEG00000014142	PAPOLA	99	70.424	Ailuropoda_melanoleuca
ENSPKIG00000014471	papola	99	70.511	ENSAPLG00000006645	PAPOLA	99	68.938	Anas_platyrhynchos
ENSPKIG00000014471	papola	98	70.321	ENSACAG00000013474	PAPOLA	99	74.277	Anolis_carolinensis
ENSPKIG00000014471	papola	100	70.249	ENSANAG00000018274	PAPOLA	98	86.245	Aotus_nancymaae
ENSPKIG00000014471	papola	77	80.187	ENSANAG00000027941	-	95	81.165	Aotus_nancymaae
ENSPKIG00000014471	papola	100	73.735	ENSAMXG00000018141	papola	98	87.684	Astyanax_mexicanus
ENSPKIG00000014471	papola	100	69.935	ENSBTAG00000004054	PAPOLA	100	74.661	Bos_taurus
ENSPKIG00000014471	papola	100	69.974	ENSCJAG00000006512	PAPOLA	98	86.245	Callithrix_jacchus
ENSPKIG00000014471	papola	99	70.557	ENSCAFG00000017783	PAPOLA	98	70.424	Canis_familiaris
ENSPKIG00000014471	papola	99	71.547	ENSCAFG00020011550	PAPOLA	96	86.592	Canis_lupus_dingo
ENSPKIG00000014471	papola	99	70.159	ENSCHIG00000025004	-	99	75.814	Capra_hircus
ENSPKIG00000014471	papola	99	71.133	ENSTSYG00000012384	PAPOLA	94	74.233	Carlito_syrichta
ENSPKIG00000014471	papola	100	67.582	ENSCPOG00000002648	PAPOLA	100	66.797	Cavia_porcellus
ENSPKIG00000014471	papola	100	69.843	ENSCCAG00000025120	PAPOLA	96	85.311	Cebus_capucinus
ENSPKIG00000014471	papola	100	69.780	ENSCATG00000018815	PAPOLA	98	86.629	Cercocebus_atys
ENSPKIG00000014471	papola	100	70.850	ENSCLAG00000016342	PAPOLA	96	74.811	Chinchilla_lanigera
ENSPKIG00000014471	papola	100	69.780	ENSCSAG00000010516	PAPOLA	100	68.742	Chlorocebus_sabaeus
ENSPKIG00000014471	papola	72	65.455	ENSCHOG00000001115	PAPOLA	71	67.097	Choloepus_hoffmanni
ENSPKIG00000014471	papola	100	69.895	ENSCPBG00000024125	PAPOLA	100	68.325	Chrysemys_picta_bellii
ENSPKIG00000014471	papola	99	65.263	ENSCANG00000000159	PAPOLA	99	64.840	Colobus_angolensis_palliatus
ENSPKIG00000014471	papola	100	64.791	ENSCGRG00001000229	-	98	71.498	Cricetulus_griseus_chok1gshd
ENSPKIG00000014471	papola	99	61.619	ENSCGRG00001002732	-	97	66.456	Cricetulus_griseus_chok1gshd
ENSPKIG00000014471	papola	100	70.884	ENSCGRG00001022693	-	96	74.359	Cricetulus_griseus_chok1gshd
ENSPKIG00000014471	papola	99	71.310	ENSCGRG00000003664	-	99	70.621	Cricetulus_griseus_crigri
ENSPKIG00000014471	papola	100	61.325	ENSCGRG00000000257	-	100	60.795	Cricetulus_griseus_crigri
ENSPKIG00000014471	papola	98	60.647	ENSCGRG00000001888	-	96	60.054	Cricetulus_griseus_crigri
ENSPKIG00000014471	papola	71	53.455	ENSCSEG00000001841	-	72	53.455	Cynoglossus_semilaevis
ENSPKIG00000014471	papola	100	72.727	ENSDARG00000009585	papola	100	72.021	Danio_rerio
ENSPKIG00000014471	papola	66	61.479	ENSDORG00000013415	-	100	58.674	Dipodomys_ordii
ENSPKIG00000014471	papola	98	62.383	ENSETEG00000004889	PAPOLA	98	61.714	Echinops_telfairi
ENSPKIG00000014471	papola	99	70.816	ENSELUG00000018972	papola	100	69.737	Esox_lucius
ENSPKIG00000014471	papola	100	70.327	ENSFCAG00000006784	PAPOLA	100	71.156	Felis_catus
ENSPKIG00000014471	papola	99	70.210	ENSFALG00000002547	PAPOLA	99	68.490	Ficedula_albicollis
ENSPKIG00000014471	papola	99	72.099	ENSFDAG00000010370	PAPOLA	95	75.077	Fukomys_damarensis
ENSPKIG00000014471	papola	73	66.543	ENSGMOG00000010209	papola	100	66.357	Gadus_morhua
ENSPKIG00000014471	papola	100	69.856	ENSGALG00000033099	PAPOLA	100	68.676	Gallus_gallus
ENSPKIG00000014471	papola	69	55.625	ENSGACG00000006142	-	100	55.625	Gasterosteus_aculeatus
ENSPKIG00000014471	papola	89	76.279	ENSGAGG00000020500	PAPOLA	99	74.018	Gopherus_agassizii
ENSPKIG00000014471	papola	100	69.909	ENSGGOG00000006287	PAPOLA	98	79.074	Gorilla_gorilla
ENSPKIG00000014471	papola	100	57.201	ENSHGLG00000007467	-	100	56.250	Heterocephalus_glaber_female
ENSPKIG00000014471	papola	100	70.419	ENSHGLG00000007909	-	96	74.773	Heterocephalus_glaber_female
ENSPKIG00000014471	papola	99	63.032	ENSHGLG00000017457	-	94	69.360	Heterocephalus_glaber_female
ENSPKIG00000014471	papola	100	70.288	ENSHGLG00100017273	PAPOLA	96	74.622	Heterocephalus_glaber_male
ENSPKIG00000014471	papola	91	78.696	ENSIPUG00000005919	papola	100	66.833	Ictalurus_punctatus
ENSPKIG00000014471	papola	100	70.924	ENSSTOG00000011471	PAPOLA	100	70.748	Ictidomys_tridecemlineatus
ENSPKIG00000014471	papola	99	71.409	ENSJJAG00000024340	Papola	99	70.718	Jaculus_jaculus
ENSPKIG00000014471	papola	99	65.092	ENSLACG00000018136	PAPOLA	99	63.911	Latimeria_chalumnae
ENSPKIG00000014471	papola	99	68.124	ENSLOCG00000008632	papola	99	68.085	Lepisosteus_oculatus
ENSPKIG00000014471	papola	98	70.683	ENSLAFG00000000946	PAPOLA	98	69.880	Loxodonta_africana
ENSPKIG00000014471	papola	100	69.780	ENSMFAG00000001792	PAPOLA	98	86.542	Macaca_fascicularis
ENSPKIG00000014471	papola	100	69.780	ENSMMUG00000018610	PAPOLA	100	68.742	Macaca_mulatta
ENSPKIG00000014471	papola	100	69.780	ENSMNEG00000043747	PAPOLA	99	85.130	Macaca_nemestrina
ENSPKIG00000014471	papola	100	69.780	ENSMLEG00000032066	PAPOLA	100	69.433	Mandrillus_leucophaeus
ENSPKIG00000014471	papola	84	68.217	ENSMGAG00000013228	-	100	66.822	Meleagris_gallopavo
ENSPKIG00000014471	papola	100	70.884	ENSMAUG00000017178	Papola	100	70.476	Mesocricetus_auratus
ENSPKIG00000014471	papola	100	70.327	ENSMICG00000010347	PAPOLA	96	86.604	Microcebus_murinus
ENSPKIG00000014471	papola	100	70.380	ENSMOCG00000021670	Papola	100	70.068	Microtus_ochrogaster
ENSPKIG00000014471	papola	100	69.935	ENSMODG00000012887	-	100	69.110	Monodelphis_domestica
ENSPKIG00000014471	papola	99	61.039	ENSMODG00000001969	-	99	61.119	Monodelphis_domestica
ENSPKIG00000014471	papola	100	70.065	MGP_CAROLIEiJ_G0018093	Papola	96	74.359	Mus_caroli
ENSPKIG00000014471	papola	100	70.748	ENSMUSG00000021111	Papola	96	74.208	Mus_musculus
ENSPKIG00000014471	papola	100	70.748	MGP_PahariEiJ_G0029850	Papola	96	74.208	Mus_pahari
ENSPKIG00000014471	papola	100	69.935	MGP_SPRETEiJ_G0018943	Papola	96	74.208	Mus_spretus
ENSPKIG00000014471	papola	100	70.196	ENSMPUG00000003054	PAPOLA	100	69.804	Mustela_putorius_furo
ENSPKIG00000014471	papola	100	69.935	ENSMLUG00000010922	PAPOLA	100	69.542	Myotis_lucifugus
ENSPKIG00000014471	papola	98	71.250	ENSNGAG00000022172	Papola	96	74.584	Nannospalax_galili
ENSPKIG00000014471	papola	99	68.913	ENSNLEG00000000625	PAPOLA	100	67.663	Nomascus_leucogenys
ENSPKIG00000014471	papola	64	49.776	ENSMEUG00000007831	-	67	49.776	Notamacropus_eugenii
ENSPKIG00000014471	papola	98	66.756	ENSOPRG00000007625	PAPOLA	100	65.550	Ochotona_princeps
ENSPKIG00000014471	papola	71	54.601	ENSONIG00000001062	-	99	54.601	Oreochromis_niloticus
ENSPKIG00000014471	papola	99	71.233	ENSOANG00000013812	PAPOLA	99	69.684	Ornithorhynchus_anatinus
ENSPKIG00000014471	papola	99	68.874	ENSOCUG00000011531	PAPOLA	99	68.742	Oryctolagus_cuniculus
ENSPKIG00000014471	papola	100	70.496	ENSOGAG00000004611	PAPOLA	100	69.713	Otolemur_garnettii
ENSPKIG00000014471	papola	100	69.935	ENSOARG00000016579	-	100	69.582	Ovis_aries
ENSPKIG00000014471	papola	100	69.909	ENSPPAG00000030505	PAPOLA	97	84.181	Pan_paniscus
ENSPKIG00000014471	papola	100	70.327	ENSPPRG00000008616	PAPOLA	100	69.935	Panthera_pardus
ENSPKIG00000014471	papola	99	70.690	ENSPTIG00000018852	PAPOLA	99	70.292	Panthera_tigris_altaica
ENSPKIG00000014471	papola	100	69.909	ENSPTRG00000006704	PAPOLA	100	69.565	Pan_troglodytes
ENSPKIG00000014471	papola	100	69.780	ENSPANG00000025582	PAPOLA	97	86.629	Papio_anubis
ENSPKIG00000014471	papola	100	69.713	ENSPSIG00000014157	PAPOLA	87	68.668	Pelodiscus_sinensis
ENSPKIG00000014471	papola	98	71.170	ENSPEMG00000000043	Papola	100	70.436	Peromyscus_maniculatus_bairdii
ENSPKIG00000014471	papola	100	69.673	ENSPCIG00000013234	PAPOLA	96	74.622	Phascolarctos_cinereus
ENSPKIG00000014471	papola	99	68.289	ENSPPYG00000006128	PAPOLA	100	66.710	Pongo_abelii
ENSPKIG00000014471	papola	89	67.155	ENSPCAG00000004199	PAPOLA	100	65.797	Procavia_capensis
ENSPKIG00000014471	papola	99	67.905	ENSPCOG00000022117	PAPOLA	95	82.298	Propithecus_coquereli
ENSPKIG00000014471	papola	100	69.542	ENSPVAG00000013925	PAPOLA	100	69.150	Pteropus_vampyrus
ENSPKIG00000014471	papola	99	75.731	ENSPNAG00000010467	papola	100	73.806	Pygocentrus_nattereri
ENSPKIG00000014471	papola	100	70.065	ENSRNOG00000004827	Papola	100	69.020	Rattus_norvegicus
ENSPKIG00000014471	papola	99	70.748	ENSRBIG00000038490	PAPOLA	92	88.153	Rhinopithecus_bieti
ENSPKIG00000014471	papola	100	69.780	ENSRROG00000025545	PAPOLA	100	68.742	Rhinopithecus_roxellana
ENSPKIG00000014471	papola	99	70.424	ENSSBOG00000024061	PAPOLA	94	86.550	Saimiri_boliviensis_boliviensis
ENSPKIG00000014471	papola	99	70.292	ENSSHAG00000015211	PAPOLA	99	69.456	Sarcophilus_harrisii
ENSPKIG00000014471	papola	100	78.890	ENSSFOG00015004431	papola	99	91.376	Scleropages_formosus
ENSPKIG00000014471	papola	98	47.295	ENSSDUG00000018247	-	72	58.969	Seriola_dumerili
ENSPKIG00000014471	papola	98	70.321	ENSSPUG00000005835	PAPOLA	100	68.497	Sphenodon_punctatus
ENSPKIG00000014471	papola	100	70.588	ENSSSCG00000002505	-	96	75.415	Sus_scrofa
ENSPKIG00000014471	papola	99	70.681	ENSTGUG00000012687	PAPOLA	99	68.717	Taeniopygia_guttata
ENSPKIG00000014471	papola	72	81.148	ENSTBEG00000000194	PAPOLA	71	81.148	Tupaia_belangeri
ENSPKIG00000014471	papola	75	79.051	ENSTTRG00000005717	PAPOLA	77	79.010	Tursiops_truncatus
ENSPKIG00000014471	papola	60	89.048	ENSUAMG00000025737	PAPOLA	98	89.048	Ursus_americanus
ENSPKIG00000014471	papola	99	70.789	ENSVPAG00000006464	PAPOLA	100	70.132	Vicugna_pacos
ENSPKIG00000014471	papola	100	70.196	ENSVVUG00000028340	PAPOLA	100	71.429	Vulpes_vulpes
ENSPKIG00000014471	papola	100	69.685	ENSXETG00000013949	papola	100	68.373	Xenopus_tropicalis