EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000014528 (Gene tree)
Gene ID: 111840923
Gene Symbol: -
Alias: -
Full Name: RAB13%2C member RAS oncogene family
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Plus strand
Length: 7247 bases
Position: chrPGUA01000081.1:2144141-2151387
Accession: 111840923
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000035725	MMR_HSR1	PF01926.23	9.4e-05	1	1
ENSPKIP00000035683	MMR_HSR1	PF01926.23	0.00011	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000016618	-	3180	-	ENSPKIP00000035683	201 (aa)	XP_023662059	UPI000CD62944
ENSPKIT00000016637	-	3049	-	ENSPKIP00000035702	208 (aa)	-	-
ENSPKIT00000016660	-	555	-	ENSPKIP00000035725	184 (aa)	-	-

Gene Model

Click here to download ENSPKIG00000014528's gene model file

Pathways

Pathway ID	Pathway Name	Source
pki04530	Tight junction	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000014528's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000014528	-	96	35.714	ENSPKIG00000019449	KRAS	95	35.714
ENSPKIG00000014528	-	82	41.139	ENSPKIG00000020212	rab9a	83	40.000
ENSPKIG00000014528	-	86	49.367	ENSPKIG00000011640	rab11bb	79	47.399
ENSPKIG00000014528	-	96	51.795	ENSPKIG00000003902	RAB1B	92	51.795
ENSPKIG00000014528	-	89	32.065	ENSPKIG00000007853	rasd4	85	32.065
ENSPKIG00000014528	-	87	43.827	ENSPKIG00000025667	-	82	44.571
ENSPKIG00000014528	-	83	40.127	ENSPKIG00000014623	rab9b	76	39.053
ENSPKIG00000014528	-	96	37.143	ENSPKIG00000021209	si:dkey-34d22.5	96	37.143
ENSPKIG00000014528	-	85	49.682	ENSPKIG00000009739	rab2a	78	49.697
ENSPKIG00000014528	-	86	36.416	ENSPKIG00000013507	hrasb	90	36.416
ENSPKIG00000014528	-	94	45.745	ENSPKIG00000015202	rab30	92	45.745
ENSPKIG00000014528	-	86	55.063	ENSPKIG00000009021	rab3db	72	55.000
ENSPKIG00000014528	-	83	48.026	ENSPKIG00000024232	-	76	46.835
ENSPKIG00000014528	-	92	41.711	ENSPKIG00000018584	rab41	89	41.711
ENSPKIG00000014528	-	99	36.634	ENSPKIG00000025312	-	91	36.634
ENSPKIG00000014528	-	86	47.205	ENSPKIG00000020795	rab39bb	81	47.093
ENSPKIG00000014528	-	96	39.303	ENSPKIG00000013397	zgc:101559	84	39.303
ENSPKIG00000014528	-	99	51.000	ENSPKIG00000016450	rab1ba	99	51.000
ENSPKIG00000014528	-	86	36.571	ENSPKIG00000002719	si:cabz01085950.1	85	36.571
ENSPKIG00000014528	-	64	32.000	ENSPKIG00000006104	arfrp1	59	32.000
ENSPKIG00000014528	-	89	36.066	ENSPKIG00000008691	si:dkey-13a21.4	89	36.066
ENSPKIG00000014528	-	86	48.734	ENSPKIG00000011703	-	79	46.821
ENSPKIG00000014528	-	96	39.801	ENSPKIG00000013084	rab33ba	88	39.801
ENSPKIG00000014528	-	87	55.625	ENSPKIG00000025079	rab35b	98	49.246
ENSPKIG00000014528	-	89	39.560	ENSPKIG00000015234	-	87	39.560
ENSPKIG00000014528	-	92	36.898	ENSPKIG00000013326	rab34b	69	36.898
ENSPKIG00000014528	-	85	49.359	ENSPKIG00000005764	RAB2A	83	49.359
ENSPKIG00000014528	-	88	41.011	ENSPKIG00000001237	-	82	41.011
ENSPKIG00000014528	-	93	37.368	ENSPKIG00000021143	-	85	39.655
ENSPKIG00000014528	-	64	36.441	ENSPKIG00000010093	rap2b	92	36.923
ENSPKIG00000014528	-	86	50.625	ENSPKIG00000008579	rab12	71	50.588
ENSPKIG00000014528	-	95	38.614	ENSPKIG00000001765	rab33a	84	38.614
ENSPKIG00000014528	-	82	33.333	ENSPKIG00000005931	DNAJC27	58	33.544
ENSPKIG00000014528	-	84	37.079	ENSPKIG00000024310	rab23	93	36.842
ENSPKIG00000014528	-	79	30.065	ENSPKIG00000003511	rasl11b	64	30.065
ENSPKIG00000014528	-	58	43.925	ENSPKIG00000021308	-	86	43.925
ENSPKIG00000014528	-	85	50.641	ENSPKIG00000020893	rab11al	74	50.314
ENSPKIG00000014528	-	91	44.565	ENSPKIG00000009825	rab18a	89	44.565
ENSPKIG00000014528	-	98	52.239	ENSPKIG00000001593	rab15	94	52.239
ENSPKIG00000014528	-	85	43.312	ENSPKIG00000006906	rab14	77	43.030
ENSPKIG00000014528	-	83	34.839	ENSPKIG00000019227	-	68	35.583
ENSPKIG00000014528	-	86	41.860	ENSPKIG00000020112	-	79	41.860
ENSPKIG00000014528	-	95	38.462	ENSPKIG00000004103	rab22a	97	38.462
ENSPKIG00000014528	-	82	42.208	ENSPKIG00000006695	rab34a	62	41.875
ENSPKIG00000014528	-	82	32.692	ENSPKIG00000005039	dnajc27	86	32.911
ENSPKIG00000014528	-	57	30.172	ENSPKIG00000007818	rabl3	59	30.172
ENSPKIG00000014528	-	93	46.237	ENSPKIG00000007606	rab11a	87	46.237
ENSPKIG00000014528	-	86	44.785	ENSPKIG00000021215	-	80	44.509
ENSPKIG00000014528	-	86	36.111	ENSPKIG00000013982	rheb	93	36.111
ENSPKIG00000014528	-	86	39.444	ENSPKIG00000021975	rab36	72	39.444
ENSPKIG00000014528	-	80	32.000	ENSPKIG00000000892	rasl11a	67	32.000
ENSPKIG00000014528	-	86	48.734	ENSPKIG00000001389	-	56	46.821
ENSPKIG00000014528	-	95	41.451	ENSPKIG00000009578	rab5ab	89	41.451
ENSPKIG00000014528	-	99	53.234	ENSPKIG00000004714	rab1ab	98	53.234
ENSPKIG00000014528	-	99	53.731	ENSPKIG00000005049	-	99	53.731
ENSPKIG00000014528	-	90	32.787	ENSPKIG00000018772	-	86	32.787
ENSPKIG00000014528	-	91	44.505	ENSPKIG00000020869	rab25a	84	44.505
ENSPKIG00000014528	-	95	40.000	ENSPKIG00000025682	RAB33B	91	40.000
ENSPKIG00000014528	-	88	40.606	ENSPKIG00000007864	-	87	40.223
ENSPKIG00000014528	-	83	37.013	ENSPKIG00000025491	-	98	36.082
ENSPKIG00000014528	-	86	53.459	ENSPKIG00000005686	-	83	51.136
ENSPKIG00000014528	-	63	30.769	ENSPKIG00000012886	arl3	65	30.769
ENSPKIG00000014528	-	86	36.416	ENSPKIG00000000303	HRAS	90	36.416
ENSPKIG00000014528	-	98	42.995	ENSPKIG00000015102	-	96	42.995
ENSPKIG00000014528	-	95	31.731	ENSPKIG00000013103	rasd3	94	31.731
ENSPKIG00000014528	-	83	46.053	ENSPKIG00000003261	-	76	45.570
ENSPKIG00000014528	-	68	30.159	ENSPKIG00000017974	-	70	30.159
ENSPKIG00000014528	-	93	30.526	ENSPKIG00000025372	rabl2	83	30.526
ENSPKIG00000014528	-	95	41.451	ENSPKIG00000010291	RAB5A	89	41.451
ENSPKIG00000014528	-	91	48.901	ENSPKIG00000018888	si:dkey-16l2.16	87	48.901
ENSPKIG00000014528	-	83	35.714	ENSPKIG00000009416	nras	85	36.420
ENSPKIG00000014528	-	87	55.000	ENSPKIG00000016213	-	99	48.780
ENSPKIG00000014528	-	85	43.590	ENSPKIG00000004170	-	77	43.030
ENSPKIG00000014528	-	95	40.415	ENSPKIG00000014618	-	92	40.415

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000014528	-	100	89.055	ENSAPOG00000001040	-	100	89.055	Acanthochromis_polyacanthus
ENSPKIG00000014528	-	100	69.312	ENSACIG00000003157	-	100	69.312	Amphilophus_citrinellus
ENSPKIG00000014528	-	100	89.055	ENSAOCG00000015908	-	100	89.055	Amphiprion_ocellaris
ENSPKIG00000014528	-	100	89.055	ENSAPEG00000004121	-	100	89.055	Amphiprion_percula
ENSPKIG00000014528	-	100	85.075	ENSATEG00000023662	-	100	85.075	Anabas_testudineus
ENSPKIG00000014528	-	100	87.562	ENSACLG00000019643	-	100	87.562	Astatotilapia_calliptera
ENSPKIG00000014528	-	100	87.562	ENSCVAG00000022649	-	100	87.562	Cyprinodon_variegatus
ENSPKIG00000014528	-	88	75.155	ENSDARG00000103934	megf8	99	74.419	Danio_rerio
ENSPKIG00000014528	-	100	85.572	ENSGAFG00000014787	-	100	85.572	Gambusia_affinis
ENSPKIG00000014528	-	100	87.562	ENSHBUG00000003728	-	100	87.562	Haplochromis_burtoni
ENSPKIG00000014528	-	100	87.562	ENSMZEG00005015817	-	100	87.562	Maylandia_zebra
ENSPKIG00000014528	-	100	87.562	ENSMMOG00000003924	-	100	87.562	Mola_mola
ENSPKIG00000014528	-	100	89.552	ENSMALG00000020807	-	100	89.552	Monopterus_albus
ENSPKIG00000014528	-	59	88.889	ENSOPRG00000014416	-	100	88.889	Ochotona_princeps
ENSPKIG00000014528	-	100	85.572	ENSORLG00000025395	-	100	85.572	Oryzias_latipes
ENSPKIG00000014528	-	100	85.075	ENSORLG00020009535	-	100	85.075	Oryzias_latipes_hni
ENSPKIG00000014528	-	100	85.572	ENSORLG00015015518	-	100	85.572	Oryzias_latipes_hsok
ENSPKIG00000014528	-	100	86.567	ENSPFOG00000014418	-	100	86.567	Poecilia_formosa
ENSPKIG00000014528	-	100	86.567	ENSPLAG00000003181	-	100	86.567	Poecilia_latipinna
ENSPKIG00000014528	-	100	86.567	ENSPMEG00000022988	-	100	86.567	Poecilia_mexicana
ENSPKIG00000014528	-	100	86.567	ENSPMEG00000008020	-	100	86.567	Poecilia_mexicana
ENSPKIG00000014528	-	100	87.065	ENSPNYG00000004681	-	100	87.065	Pundamilia_nyererei
ENSPKIG00000014528	-	100	91.045	ENSSFOG00015021754	rab13	100	91.045	Scleropages_formosus
ENSPKIG00000014528	-	100	88.557	ENSSMAG00000016376	-	100	88.557	Scophthalmus_maximus
ENSPKIG00000014528	-	100	65.534	ENSSMAG00000002569	-	100	65.534	Scophthalmus_maximus
ENSPKIG00000014528	-	100	89.552	ENSSDUG00000006307	-	100	89.552	Seriola_dumerili
ENSPKIG00000014528	-	100	89.552	ENSSLDG00000015823	-	100	89.552	Seriola_lalandi_dorsalis
ENSPKIG00000014528	-	100	89.055	ENSSPAG00000022440	-	100	89.055	Stegastes_partitus
ENSPKIG00000014528	-	100	88.557	ENSTNIG00000018319	-	100	88.557	Tetraodon_nigroviridis
ENSPKIG00000014528	-	100	86.070	ENSXMAG00000016094	-	100	86.070	Xiphophorus_maculatus