EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000014974 (Gene tree)
Gene ID: 111845109
Gene Symbol: rad54b
Alias: -
Full Name: RAD54 homolog B
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Minus strand
Length: 19486 bases
Position: chrPGUA01000002.1:2259687-2279172
Accession: 111845109
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000036385	ResIII	PF04851.15	3.2e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000017332	-	2927	-	ENSPKIP00000036385	918 (aa)	XP_023670019	UPI000CD61B59

Gene Model

Click here to download ENSPKIG00000014974's gene model file

Pathways

Pathway ID	Pathway Name	Source
pki03440	Homologous recombination	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000014974's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000014974	rad54b	54	32.490	ENSPKIG00000022166	chd1l	53	32.490
ENSPKIG00000014974	rad54b	77	41.192	ENSPKIG00000016172	rad54l	95	41.001
ENSPKIG00000014974	rad54b	55	32.171	ENSPKIG00000015699	SMARCA5	50	31.656

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000014974	rad54b	99	58.170	ENSG00000197275	RAD54B	99	58.170	Homo_sapiens
ENSPKIG00000014974	rad54b	78	62.881	ENSG00000265817	FSBP	99	62.881	Homo_sapiens
ENSPKIG00000014974	rad54b	99	58.568	ENSAMEG00000005834	-	99	58.568	Ailuropoda_melanoleuca
ENSPKIG00000014974	rad54b	99	63.952	ENSACIG00000013005	rad54b	99	63.952	Amphilophus_citrinellus
ENSPKIG00000014974	rad54b	99	63.501	ENSAOCG00000008523	rad54b	99	63.607	Amphiprion_ocellaris
ENSPKIG00000014974	rad54b	99	61.858	ENSAPEG00000001673	rad54b	99	62.077	Amphiprion_percula
ENSPKIG00000014974	rad54b	99	64.432	ENSATEG00000001527	rad54b	99	64.432	Anabas_testudineus
ENSPKIG00000014974	rad54b	99	60.000	ENSAPLG00000014366	-	99	60.000	Anas_platyrhynchos
ENSPKIG00000014974	rad54b	86	63.752	ENSACAG00000003671	-	98	63.970	Anolis_carolinensis
ENSPKIG00000014974	rad54b	70	64.697	ENSANAG00000019528	-	99	64.396	Aotus_nancymaae
ENSPKIG00000014974	rad54b	99	63.991	ENSACLG00000007826	rad54b	99	63.991	Astatotilapia_calliptera
ENSPKIG00000014974	rad54b	85	67.766	ENSAMXG00000039985	rad54b	95	67.588	Astyanax_mexicanus
ENSPKIG00000014974	rad54b	99	57.284	ENSBTAG00000000632	RAD54B	99	57.284	Bos_taurus
ENSPKIG00000014974	rad54b	77	35.995	WBGene00013792	Y116A8C.13	86	35.651	Caenorhabditis_elegans
ENSPKIG00000014974	rad54b	99	58.433	ENSCJAG00000000080	-	99	62.881	Callithrix_jacchus
ENSPKIG00000014974	rad54b	99	59.259	ENSCAFG00000009179	RAD54B	99	59.259	Canis_familiaris
ENSPKIG00000014974	rad54b	99	59.150	ENSCAFG00020012084	-	99	59.150	Canis_lupus_dingo
ENSPKIG00000014974	rad54b	99	57.768	ENSCHIG00000008230	-	99	57.768	Capra_hircus
ENSPKIG00000014974	rad54b	99	58.370	ENSTSYG00000013234	-	99	58.370	Carlito_syrichta
ENSPKIG00000014974	rad54b	99	57.127	ENSCPOG00000011643	-	99	56.943	Cavia_porcellus
ENSPKIG00000014974	rad54b	99	58.523	ENSCCAG00000011754	-	99	63.172	Cebus_capucinus
ENSPKIG00000014974	rad54b	99	58.261	ENSCATG00000030661	-	99	62.881	Cercocebus_atys
ENSPKIG00000014974	rad54b	99	56.972	ENSCLAG00000010476	-	99	56.972	Chinchilla_lanigera
ENSPKIG00000014974	rad54b	99	58.388	ENSCSAG00000012712	-	99	58.388	Chlorocebus_sabaeus
ENSPKIG00000014974	rad54b	99	59.595	ENSCPBG00000003204	-	99	61.335	Chrysemys_picta_bellii
ENSPKIG00000014974	rad54b	99	58.279	ENSCANG00000017939	-	99	62.881	Colobus_angolensis_palliatus
ENSPKIG00000014974	rad54b	99	56.140	ENSCGRG00001020184	Rad54b	99	56.140	Cricetulus_griseus_chok1gshd
ENSPKIG00000014974	rad54b	99	55.434	ENSCGRG00000016752	Rad54b	99	55.434	Cricetulus_griseus_crigri
ENSPKIG00000014974	rad54b	86	68.388	ENSCSEG00000001601	rad54b	93	68.388	Cynoglossus_semilaevis
ENSPKIG00000014974	rad54b	99	64.169	ENSCVAG00000009200	rad54b	99	63.952	Cyprinodon_variegatus
ENSPKIG00000014974	rad54b	89	72.414	ENSDARG00000092134	rad54b	99	66.359	Danio_rerio
ENSPKIG00000014974	rad54b	99	58.388	ENSDNOG00000015535	-	99	58.061	Dasypus_novemcinctus
ENSPKIG00000014974	rad54b	99	58.497	ENSDORG00000002492	Rad54b	99	58.568	Dipodomys_ordii
ENSPKIG00000014974	rad54b	86	60.602	ENSETEG00000010605	-	100	60.602	Echinops_telfairi
ENSPKIG00000014974	rad54b	99	48.932	ENSEBUG00000009104	rad54b	99	48.514	Eptatretus_burgeri
ENSPKIG00000014974	rad54b	85	62.991	ENSEASG00005004021	-	88	62.991	Equus_asinus_asinus
ENSPKIG00000014974	rad54b	99	58.072	ENSECAG00000021949	-	98	58.072	Equus_caballus
ENSPKIG00000014974	rad54b	71	57.792	ENSEEUG00000008056	-	65	57.792	Erinaceus_europaeus
ENSPKIG00000014974	rad54b	99	63.203	ENSELUG00000009287	rad54b	99	63.203	Esox_lucius
ENSPKIG00000014974	rad54b	99	58.388	ENSFCAG00000015513	-	99	63.260	Felis_catus
ENSPKIG00000014974	rad54b	99	59.509	ENSFALG00000005467	-	99	59.509	Ficedula_albicollis
ENSPKIG00000014974	rad54b	99	57.361	ENSFDAG00000020541	-	99	57.361	Fukomys_damarensis
ENSPKIG00000014974	rad54b	86	67.125	ENSFHEG00000014382	rad54b	87	67.209	Fundulus_heteroclitus
ENSPKIG00000014974	rad54b	86	67.830	ENSGMOG00000014774	rad54b	99	67.830	Gadus_morhua
ENSPKIG00000014974	rad54b	99	59.184	ENSGALG00000043597	RAD54B	99	59.184	Gallus_gallus
ENSPKIG00000014974	rad54b	99	63.502	ENSGAFG00000007901	rad54b	99	63.713	Gambusia_affinis
ENSPKIG00000014974	rad54b	99	64.492	ENSGACG00000009128	rad54b	100	64.492	Gasterosteus_aculeatus
ENSPKIG00000014974	rad54b	99	60.065	ENSGAGG00000018747	-	99	60.065	Gopherus_agassizii
ENSPKIG00000014974	rad54b	99	57.872	ENSGGOG00000023516	-	99	57.872	Gorilla_gorilla
ENSPKIG00000014974	rad54b	99	64.681	ENSHBUG00000016017	rad54b	99	64.681	Haplochromis_burtoni
ENSPKIG00000014974	rad54b	99	57.127	ENSHGLG00000008263	RAD54B	98	57.127	Heterocephalus_glaber_female
ENSPKIG00000014974	rad54b	99	56.438	ENSHGLG00100008108	-	98	56.438	Heterocephalus_glaber_male
ENSPKIG00000014974	rad54b	99	60.973	ENSHCOG00000004764	rad54b	98	63.748	Hippocampus_comes
ENSPKIG00000014974	rad54b	99	61.538	ENSIPUG00000018531	rad54b	99	61.538	Ictalurus_punctatus
ENSPKIG00000014974	rad54b	100	56.526	ENSSTOG00000010791	-	99	56.526	Ictidomys_tridecemlineatus
ENSPKIG00000014974	rad54b	99	58.425	ENSJJAG00000010314	Rad54b	99	58.425	Jaculus_jaculus
ENSPKIG00000014974	rad54b	99	62.189	ENSKMAG00000004744	rad54b	99	62.189	Kryptolebias_marmoratus
ENSPKIG00000014974	rad54b	81	66.489	ENSLACG00000000859	-	100	66.489	Latimeria_chalumnae
ENSPKIG00000014974	rad54b	99	68.060	ENSLOCG00000010100	rad54b	99	68.376	Lepisosteus_oculatus
ENSPKIG00000014974	rad54b	85	61.217	ENSLAFG00000015315	-	97	61.217	Loxodonta_africana
ENSPKIG00000014974	rad54b	99	58.370	ENSMFAG00000031629	-	99	62.881	Macaca_fascicularis
ENSPKIG00000014974	rad54b	99	58.370	ENSMMUG00000005659	-	99	58.370	Macaca_mulatta
ENSPKIG00000014974	rad54b	99	58.152	ENSMNEG00000016408	-	99	58.152	Macaca_nemestrina
ENSPKIG00000014974	rad54b	99	58.370	ENSMLEG00000006946	-	99	58.370	Mandrillus_leucophaeus
ENSPKIG00000014974	rad54b	99	61.987	ENSMAMG00000012269	rad54b	99	61.987	Mastacembelus_armatus
ENSPKIG00000014974	rad54b	99	64.468	ENSMZEG00005005281	rad54b	96	69.098	Maylandia_zebra
ENSPKIG00000014974	rad54b	99	58.773	ENSMGAG00000012024	-	99	58.773	Meleagris_gallopavo
ENSPKIG00000014974	rad54b	99	56.627	ENSMAUG00000013586	Rad54b	99	56.627	Mesocricetus_auratus
ENSPKIG00000014974	rad54b	99	57.549	ENSMICG00000000754	-	99	57.549	Microcebus_murinus
ENSPKIG00000014974	rad54b	99	56.616	ENSMOCG00000020035	Rad54b	99	56.880	Microtus_ochrogaster
ENSPKIG00000014974	rad54b	99	60.799	ENSMMOG00000003394	rad54b	99	60.799	Mola_mola
ENSPKIG00000014974	rad54b	88	60.419	ENSMODG00000007343	-	99	60.419	Monodelphis_domestica
ENSPKIG00000014974	rad54b	70	69.147	ENSMALG00000001520	rad54b	99	69.147	Monopterus_albus
ENSPKIG00000014974	rad54b	99	57.361	MGP_CAROLIEiJ_G0025810	Rad54b	99	57.361	Mus_caroli
ENSPKIG00000014974	rad54b	99	57.127	ENSMUSG00000078773	Rad54b	99	57.127	Mus_musculus
ENSPKIG00000014974	rad54b	99	57.709	MGP_PahariEiJ_G0023933	Rad54b	99	57.709	Mus_pahari
ENSPKIG00000014974	rad54b	99	57.236	MGP_SPRETEiJ_G0026758	Rad54b	99	57.236	Mus_spretus
ENSPKIG00000014974	rad54b	85	63.464	ENSMPUG00000008878	-	96	63.464	Mustela_putorius_furo
ENSPKIG00000014974	rad54b	99	57.543	ENSMLUG00000008953	-	99	57.543	Myotis_lucifugus
ENSPKIG00000014974	rad54b	99	56.659	ENSNGAG00000017537	Rad54b	99	56.659	Nannospalax_galili
ENSPKIG00000014974	rad54b	99	64.425	ENSNBRG00000013394	rad54b	99	64.425	Neolamprologus_brichardi
ENSPKIG00000014974	rad54b	99	57.923	ENSNLEG00000003062	-	99	62.742	Nomascus_leucogenys
ENSPKIG00000014974	rad54b	69	60.519	ENSMEUG00000012426	-	69	60.519	Notamacropus_eugenii
ENSPKIG00000014974	rad54b	78	63.889	ENSODEG00000002650	-	95	63.889	Octodon_degus
ENSPKIG00000014974	rad54b	99	57.314	ENSODEG00000019564	-	99	57.314	Octodon_degus
ENSPKIG00000014974	rad54b	99	64.856	ENSONIG00000006067	rad54b	99	64.856	Oreochromis_niloticus
ENSPKIG00000014974	rad54b	81	63.320	ENSOANG00000011348	-	99	63.320	Ornithorhynchus_anatinus
ENSPKIG00000014974	rad54b	99	57.804	ENSOCUG00000016478	-	99	57.804	Oryctolagus_cuniculus
ENSPKIG00000014974	rad54b	99	63.819	ENSORLG00000008918	rad54b	99	71.517	Oryzias_latipes
ENSPKIG00000014974	rad54b	70	71.362	ENSORLG00020012171	rad54b	99	71.362	Oryzias_latipes_hni
ENSPKIG00000014974	rad54b	99	63.819	ENSORLG00015018536	rad54b	99	63.819	Oryzias_latipes_hsok
ENSPKIG00000014974	rad54b	84	69.201	ENSOMEG00000004345	rad54b	99	69.201	Oryzias_melastigma
ENSPKIG00000014974	rad54b	99	57.359	ENSOGAG00000007854	-	99	57.359	Otolemur_garnettii
ENSPKIG00000014974	rad54b	88	61.776	ENSOARG00000007691	-	99	61.776	Ovis_aries
ENSPKIG00000014974	rad54b	99	56.972	ENSPPAG00000029572	-	99	56.972	Pan_paniscus
ENSPKIG00000014974	rad54b	99	58.651	ENSPPRG00000007571	-	99	63.260	Panthera_pardus
ENSPKIG00000014974	rad54b	78	63.260	ENSPTIG00000012670	-	99	63.260	Panthera_tigris_altaica
ENSPKIG00000014974	rad54b	99	58.170	ENSPTRG00000020427	-	99	62.881	Pan_troglodytes
ENSPKIG00000014974	rad54b	99	58.370	ENSPANG00000019566	-	99	58.370	Papio_anubis
ENSPKIG00000014974	rad54b	99	59.115	ENSPSIG00000002383	-	96	64.177	Pelodiscus_sinensis
ENSPKIG00000014974	rad54b	99	57.002	ENSPEMG00000012133	Rad54b	99	57.002	Peromyscus_maniculatus_bairdii
ENSPKIG00000014974	rad54b	85	60.629	ENSPMAG00000002916	rad54b	98	60.629	Petromyzon_marinus
ENSPKIG00000014974	rad54b	85	61.899	ENSPCIG00000020151	-	91	61.646	Phascolarctos_cinereus
ENSPKIG00000014974	rad54b	99	63.836	ENSPFOG00000023411	rad54b	99	63.598	Poecilia_formosa
ENSPKIG00000014974	rad54b	99	63.941	ENSPLAG00000010430	rad54b	99	63.703	Poecilia_latipinna
ENSPKIG00000014974	rad54b	99	63.627	ENSPMEG00000016873	rad54b	99	63.627	Poecilia_mexicana
ENSPKIG00000014974	rad54b	99	64.195	ENSPREG00000018443	rad54b	99	64.195	Poecilia_reticulata
ENSPKIG00000014974	rad54b	99	58.061	ENSPPYG00000018750	-	99	58.061	Pongo_abelii
ENSPKIG00000014974	rad54b	99	58.658	ENSPCOG00000026845	-	99	63.812	Propithecus_coquereli
ENSPKIG00000014974	rad54b	80	61.425	ENSPVAG00000000261	-	85	61.425	Pteropus_vampyrus
ENSPKIG00000014974	rad54b	86	68.414	ENSPNYG00000018303	rad54b	97	68.414	Pundamilia_nyererei
ENSPKIG00000014974	rad54b	99	63.215	ENSPNAG00000000295	rad54b	99	63.215	Pygocentrus_nattereri
ENSPKIG00000014974	rad54b	99	57.018	ENSRNOG00000039949	Rad54b	99	57.018	Rattus_norvegicus
ENSPKIG00000014974	rad54b	99	58.061	ENSRBIG00000020419	-	99	58.061	Rhinopithecus_bieti
ENSPKIG00000014974	rad54b	99	57.952	ENSRROG00000039897	-	99	57.952	Rhinopithecus_roxellana
ENSPKIG00000014974	rad54b	89	34.721	YBR073W	RDH54	92	34.973	Saccharomyces_cerevisiae
ENSPKIG00000014974	rad54b	99	58.568	ENSSBOG00000028501	-	99	58.568	Saimiri_boliviensis_boliviensis
ENSPKIG00000014974	rad54b	99	58.215	ENSSHAG00000017038	-	99	58.215	Sarcophilus_harrisii
ENSPKIG00000014974	rad54b	63	78.472	ENSSFOG00015008483	rad54b	89	78.472	Scleropages_formosus
ENSPKIG00000014974	rad54b	99	62.513	ENSSMAG00000018659	rad54b	99	62.618	Scophthalmus_maximus
ENSPKIG00000014974	rad54b	96	63.922	ENSSDUG00000001122	rad54b	96	64.464	Seriola_dumerili
ENSPKIG00000014974	rad54b	99	63.789	ENSSLDG00000013787	rad54b	99	64.316	Seriola_lalandi_dorsalis
ENSPKIG00000014974	rad54b	99	60.022	ENSSPUG00000016497	-	99	60.022	Sphenodon_punctatus
ENSPKIG00000014974	rad54b	99	63.952	ENSSPAG00000012800	rad54b	99	63.952	Stegastes_partitus
ENSPKIG00000014974	rad54b	99	57.705	ENSSSCG00000006101	-	97	62.916	Sus_scrofa
ENSPKIG00000014974	rad54b	99	59.572	ENSTGUG00000011880	-	100	59.572	Taeniopygia_guttata
ENSPKIG00000014974	rad54b	99	62.290	ENSTRUG00000010015	rad54b	99	62.712	Takifugu_rubripes
ENSPKIG00000014974	rad54b	99	54.139	ENSTTRG00000006312	-	99	54.139	Tursiops_truncatus
ENSPKIG00000014974	rad54b	99	58.297	ENSUMAG00000016401	-	99	58.297	Ursus_maritimus
ENSPKIG00000014974	rad54b	99	57.895	ENSVPAG00000003157	-	99	57.895	Vicugna_pacos
ENSPKIG00000014974	rad54b	99	49.196	ENSXETG00000025924	rad54b	99	53.021	Xenopus_tropicalis
ENSPKIG00000014974	rad54b	99	63.587	ENSXMAG00000013141	rad54b	99	63.587	Xiphophorus_maculatus