EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000015492 (Gene tree)
Gene ID: -
Gene Symbol: prdm5
Alias: -
Full Name: PR domain containing 5
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Minus strand
Length: 35303 bases
Position: chrPGUA01000321.1:709209-744511
Accession: ZDB-GENE-040708-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000037235	zf-C2H2	PF00096.26	1.9e-38	1	7
ENSPKIP00000037235	zf-C2H2	PF00096.26	1.9e-38	2	7
ENSPKIP00000037235	zf-C2H2	PF00096.26	1.9e-38	3	7
ENSPKIP00000037235	zf-C2H2	PF00096.26	1.9e-38	4	7
ENSPKIP00000037235	zf-C2H2	PF00096.26	1.9e-38	5	7
ENSPKIP00000037235	zf-C2H2	PF00096.26	1.9e-38	6	7
ENSPKIP00000037235	zf-C2H2	PF00096.26	1.9e-38	7	7
ENSPKIP00000037235	zf-met	PF12874.7	1.7e-19	1	4
ENSPKIP00000037235	zf-met	PF12874.7	1.7e-19	2	4
ENSPKIP00000037235	zf-met	PF12874.7	1.7e-19	3	4
ENSPKIP00000037235	zf-met	PF12874.7	1.7e-19	4	4
ENSPKIP00000037235	zf-C2H2_jaz	PF12171.8	2e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000018197	-	1608	-	ENSPKIP00000037235	535 (aa)	-	-

Gene Model

Click here to download ENSPKIG00000015492's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000015492's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000015492	prdm5	51	37.391	ENSPKIG00000020085	scrt1a	54	42.667
ENSPKIG00000015492	prdm5	67	35.652	ENSPKIG00000001942	e4f1	57	35.652
ENSPKIG00000015492	prdm5	75	36.264	ENSPKIG00000012069	-	94	36.264
ENSPKIG00000015492	prdm5	68	37.234	ENSPKIG00000010773	-	91	37.234
ENSPKIG00000015492	prdm5	72	39.048	ENSPKIG00000006616	-	59	39.048
ENSPKIG00000015492	prdm5	91	41.121	ENSPKIG00000020324	-	53	41.121
ENSPKIG00000015492	prdm5	53	44.000	ENSPKIG00000022303	SCRT1	53	44.000
ENSPKIG00000015492	prdm5	71	35.075	ENSPKIG00000017781	-	66	41.176
ENSPKIG00000015492	prdm5	71	45.217	ENSPKIG00000002670	-	56	45.217
ENSPKIG00000015492	prdm5	69	43.396	ENSPKIG00000007872	SNAI3	55	43.396
ENSPKIG00000015492	prdm5	73	31.414	ENSPKIG00000006563	-	97	31.152
ENSPKIG00000015492	prdm5	82	44.037	ENSPKIG00000018168	znf236	68	51.948
ENSPKIG00000015492	prdm5	67	38.053	ENSPKIG00000007643	gfi1b	54	38.393
ENSPKIG00000015492	prdm5	57	41.441	ENSPKIG00000002254	SNAI2	60	41.441
ENSPKIG00000015492	prdm5	83	41.509	ENSPKIG00000007228	prdm12b	68	41.509
ENSPKIG00000015492	prdm5	73	43.678	ENSPKIG00000012290	-	100	43.678
ENSPKIG00000015492	prdm5	82	39.286	ENSPKIG00000004305	PRDM12	72	39.286
ENSPKIG00000015492	prdm5	70	34.783	ENSPKIG00000018202	-	81	32.692
ENSPKIG00000015492	prdm5	76	30.662	ENSPKIG00000015139	znf319b	87	30.657
ENSPKIG00000015492	prdm5	71	33.333	ENSPKIG00000008355	-	66	33.333
ENSPKIG00000015492	prdm5	50	39.286	ENSPKIG00000006393	snai1a	57	41.026

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000015492	prdm5	99	54.980	ENSG00000138738	PRDM5	91	85.149	Homo_sapiens
ENSPKIG00000015492	prdm5	100	67.221	ENSAPOG00000023220	prdm5	100	56.423	Acanthochromis_polyacanthus
ENSPKIG00000015492	prdm5	89	49.307	ENSAMEG00000003050	PRDM5	99	49.799	Ailuropoda_melanoleuca
ENSPKIG00000015492	prdm5	100	64.667	ENSACIG00000000406	prdm5	99	59.962	Amphilophus_citrinellus
ENSPKIG00000015492	prdm5	100	65.449	ENSAOCG00000014806	prdm5	100	56.494	Amphiprion_ocellaris
ENSPKIG00000015492	prdm5	100	61.345	ENSAPEG00000016846	prdm5	98	59.740	Amphiprion_percula
ENSPKIG00000015492	prdm5	100	67.000	ENSATEG00000013829	prdm5	99	62.147	Anabas_testudineus
ENSPKIG00000015492	prdm5	94	60.265	ENSAPLG00000013828	PRDM5	100	55.140	Anas_platyrhynchos
ENSPKIG00000015492	prdm5	100	57.120	ENSACAG00000012999	PRDM5	99	51.510	Anolis_carolinensis
ENSPKIG00000015492	prdm5	100	87.288	ENSANAG00000027411	PRDM5	100	87.288	Aotus_nancymaae
ENSPKIG00000015492	prdm5	100	66.833	ENSACLG00000017996	prdm5	99	62.218	Astatotilapia_calliptera
ENSPKIG00000015492	prdm5	82	62.121	ENSAMXG00000041864	prdm5	99	56.427	Astyanax_mexicanus
ENSPKIG00000015492	prdm5	100	51.956	ENSBTAG00000012111	PRDM5	100	53.054	Bos_taurus
ENSPKIG00000015492	prdm5	100	86.441	ENSCJAG00000003133	PRDM5	100	86.441	Callithrix_jacchus
ENSPKIG00000015492	prdm5	90	48.009	ENSCAFG00000004179	PRDM5	96	48.315	Canis_familiaris
ENSPKIG00000015492	prdm5	100	52.097	ENSCAFG00020017685	PRDM5	100	53.578	Canis_lupus_dingo
ENSPKIG00000015492	prdm5	100	52.875	ENSCHIG00000018772	PRDM5	94	54.821	Capra_hircus
ENSPKIG00000015492	prdm5	93	53.291	ENSTSYG00000009630	PRDM5	95	52.030	Carlito_syrichta
ENSPKIG00000015492	prdm5	89	87.288	ENSCAPG00000015217	PRDM5	100	87.288	Cavia_aperea
ENSPKIG00000015492	prdm5	89	87.288	ENSCPOG00000012883	PRDM5	100	87.288	Cavia_porcellus
ENSPKIG00000015492	prdm5	100	87.288	ENSCCAG00000023157	PRDM5	100	87.288	Cebus_capucinus
ENSPKIG00000015492	prdm5	100	87.288	ENSCATG00000042510	PRDM5	100	87.288	Cercocebus_atys
ENSPKIG00000015492	prdm5	89	87.288	ENSCLAG00000005392	PRDM5	100	87.288	Chinchilla_lanigera
ENSPKIG00000015492	prdm5	99	51.792	ENSCSAG00000003729	PRDM5	94	53.442	Chlorocebus_sabaeus
ENSPKIG00000015492	prdm5	99	66.250	ENSCHOG00000007801	PRDM5	90	66.532	Choloepus_hoffmanni
ENSPKIG00000015492	prdm5	100	60.998	ENSCPBG00000024735	PRDM5	100	52.570	Chrysemys_picta_bellii
ENSPKIG00000015492	prdm5	100	87.288	ENSCANG00000036807	PRDM5	100	87.288	Colobus_angolensis_palliatus
ENSPKIG00000015492	prdm5	98	87.288	ENSCGRG00001010581	Prdm5	100	87.288	Cricetulus_griseus_chok1gshd
ENSPKIG00000015492	prdm5	94	50.180	ENSCGRG00000010996	-	98	47.110	Cricetulus_griseus_crigri
ENSPKIG00000015492	prdm5	100	65.894	ENSCSEG00000019979	prdm5	99	60.935	Cynoglossus_semilaevis
ENSPKIG00000015492	prdm5	100	67.047	ENSCVAG00000013692	prdm5	100	62.522	Cyprinodon_variegatus
ENSPKIG00000015492	prdm5	100	63.924	ENSDARG00000006288	prdm5	100	50.000	Danio_rerio
ENSPKIG00000015492	prdm5	90	47.774	ENSDNOG00000002009	PRDM5	100	51.378	Dasypus_novemcinctus
ENSPKIG00000015492	prdm5	99	43.164	ENSDORG00000007739	Prdm5	99	44.318	Dipodomys_ordii
ENSPKIG00000015492	prdm5	83	79.091	ENSETEG00000020268	PRDM5	85	88.034	Echinops_telfairi
ENSPKIG00000015492	prdm5	99	54.801	ENSEBUG00000004301	prdm5	100	47.761	Eptatretus_burgeri
ENSPKIG00000015492	prdm5	100	88.136	ENSEASG00005018365	PRDM5	100	88.136	Equus_asinus_asinus
ENSPKIG00000015492	prdm5	99	54.478	ENSECAG00000011516	PRDM5	90	54.631	Equus_caballus
ENSPKIG00000015492	prdm5	100	58.446	ENSECAG00000024747	-	100	48.311	Equus_caballus
ENSPKIG00000015492	prdm5	99	53.726	ENSEEUG00000010306	PRDM5	100	52.669	Erinaceus_europaeus
ENSPKIG00000015492	prdm5	100	63.361	ENSELUG00000005894	prdm5	100	63.605	Esox_lucius
ENSPKIG00000015492	prdm5	99	55.556	ENSFCAG00000025656	PRDM5	100	53.229	Felis_catus
ENSPKIG00000015492	prdm5	74	61.610	ENSFALG00000008381	PRDM5	100	63.158	Ficedula_albicollis
ENSPKIG00000015492	prdm5	100	87.288	ENSFDAG00000021361	PRDM5	100	87.288	Fukomys_damarensis
ENSPKIG00000015492	prdm5	100	66.611	ENSFHEG00000013040	prdm5	99	62.524	Fundulus_heteroclitus
ENSPKIG00000015492	prdm5	100	70.000	ENSGMOG00000012038	prdm5	100	70.000	Gadus_morhua
ENSPKIG00000015492	prdm5	100	61.260	ENSGALG00000011963	PRDM5	100	47.412	Gallus_gallus
ENSPKIG00000015492	prdm5	100	64.516	ENSGAFG00000019233	prdm5	99	62.970	Gambusia_affinis
ENSPKIG00000015492	prdm5	99	55.235	ENSGAGG00000020362	PRDM5	98	48.866	Gopherus_agassizii
ENSPKIG00000015492	prdm5	100	87.288	ENSGGOG00000013562	PRDM5	100	87.288	Gorilla_gorilla
ENSPKIG00000015492	prdm5	100	67.450	ENSHBUG00000023375	prdm5	99	62.619	Haplochromis_burtoni
ENSPKIG00000015492	prdm5	85	75.424	ENSHGLG00000003010	PRDM5	100	75.424	Heterocephalus_glaber_female
ENSPKIG00000015492	prdm5	100	87.288	ENSHGLG00100003696	PRDM5	100	87.288	Heterocephalus_glaber_male
ENSPKIG00000015492	prdm5	100	66.881	ENSHCOG00000012131	prdm5	100	62.749	Hippocampus_comes
ENSPKIG00000015492	prdm5	100	66.083	ENSIPUG00000001248	prdm5	99	61.717	Ictalurus_punctatus
ENSPKIG00000015492	prdm5	89	85.593	ENSSTOG00000004741	PRDM5	100	85.593	Ictidomys_tridecemlineatus
ENSPKIG00000015492	prdm5	89	86.441	ENSJJAG00000011464	Prdm5	100	86.441	Jaculus_jaculus
ENSPKIG00000015492	prdm5	100	65.947	ENSKMAG00000013663	prdm5	98	61.914	Kryptolebias_marmoratus
ENSPKIG00000015492	prdm5	100	68.167	ENSLBEG00000022736	prdm5	100	63.291	Labrus_bergylta
ENSPKIG00000015492	prdm5	90	60.417	ENSLACG00000009187	PRDM5	99	55.424	Latimeria_chalumnae
ENSPKIG00000015492	prdm5	100	65.397	ENSLOCG00000009778	prdm5	99	62.903	Lepisosteus_oculatus
ENSPKIG00000015492	prdm5	100	51.613	ENSLAFG00000006532	PRDM5	94	53.430	Loxodonta_africana
ENSPKIG00000015492	prdm5	100	87.288	ENSMFAG00000045845	PRDM5	100	87.288	Macaca_fascicularis
ENSPKIG00000015492	prdm5	100	87.288	ENSMMUG00000003249	PRDM5	100	87.288	Macaca_mulatta
ENSPKIG00000015492	prdm5	100	87.288	ENSMNEG00000019018	PRDM5	100	87.288	Macaca_nemestrina
ENSPKIG00000015492	prdm5	99	48.734	ENSMLEG00000023145	PRDM5	99	51.476	Mandrillus_leucophaeus
ENSPKIG00000015492	prdm5	100	67.049	ENSMAMG00000013419	prdm5	99	62.292	Mastacembelus_armatus
ENSPKIG00000015492	prdm5	100	67.450	ENSMZEG00005020645	prdm5	99	62.619	Maylandia_zebra
ENSPKIG00000015492	prdm5	94	60.099	ENSMGAG00000010710	PRDM5	100	54.766	Meleagris_gallopavo
ENSPKIG00000015492	prdm5	98	87.288	ENSMAUG00000006768	Prdm5	100	87.288	Mesocricetus_auratus
ENSPKIG00000015492	prdm5	100	87.288	ENSMICG00000001459	PRDM5	100	87.288	Microcebus_murinus
ENSPKIG00000015492	prdm5	98	87.288	ENSMOCG00000016267	Prdm5	100	87.288	Microtus_ochrogaster
ENSPKIG00000015492	prdm5	100	64.426	ENSMMOG00000006035	prdm5	99	61.538	Mola_mola
ENSPKIG00000015492	prdm5	100	58.044	ENSMODG00000018942	PRDM5	100	54.159	Monodelphis_domestica
ENSPKIG00000015492	prdm5	100	58.291	ENSMALG00000013934	prdm5	100	54.770	Monopterus_albus
ENSPKIG00000015492	prdm5	98	86.441	MGP_CAROLIEiJ_G0028463	Prdm5	100	86.441	Mus_caroli
ENSPKIG00000015492	prdm5	98	86.441	ENSMUSG00000029913	Prdm5	100	86.441	Mus_musculus
ENSPKIG00000015492	prdm5	98	86.441	MGP_PahariEiJ_G0022203	Prdm5	100	86.441	Mus_pahari
ENSPKIG00000015492	prdm5	98	86.441	MGP_SPRETEiJ_G0029467	Prdm5	100	86.441	Mus_spretus
ENSPKIG00000015492	prdm5	100	51.487	ENSMPUG00000017415	PRDM5	100	53.578	Mustela_putorius_furo
ENSPKIG00000015492	prdm5	90	50.690	ENSMLUG00000006097	PRDM5	100	50.099	Myotis_lucifugus
ENSPKIG00000015492	prdm5	98	86.441	ENSNGAG00000018317	Prdm5	100	86.441	Nannospalax_galili
ENSPKIG00000015492	prdm5	100	67.126	ENSNBRG00000004976	prdm5	98	59.665	Neolamprologus_brichardi
ENSPKIG00000015492	prdm5	100	87.288	ENSNLEG00000009107	PRDM5	100	87.288	Nomascus_leucogenys
ENSPKIG00000015492	prdm5	83	88.136	ENSMEUG00000006576	-	71	88.136	Notamacropus_eugenii
ENSPKIG00000015492	prdm5	88	63.415	ENSOPRG00000011066	-	73	63.415	Ochotona_princeps
ENSPKIG00000015492	prdm5	99	87.288	ENSODEG00000009133	PRDM5	100	87.288	Octodon_degus
ENSPKIG00000015492	prdm5	100	65.978	ENSONIG00000003111	prdm5	99	61.964	Oreochromis_niloticus
ENSPKIG00000015492	prdm5	99	53.788	ENSOANG00000015109	PRDM5	97	51.543	Ornithorhynchus_anatinus
ENSPKIG00000015492	prdm5	91	53.680	ENSOCUG00000013454	PRDM5	99	54.182	Oryctolagus_cuniculus
ENSPKIG00000015492	prdm5	100	65.449	ENSORLG00000016247	prdm5	99	61.278	Oryzias_latipes
ENSPKIG00000015492	prdm5	100	65.886	ENSORLG00020018051	prdm5	99	62.193	Oryzias_latipes_hni
ENSPKIG00000015492	prdm5	100	65.449	ENSORLG00015013760	prdm5	99	61.278	Oryzias_latipes_hsok
ENSPKIG00000015492	prdm5	100	66.169	ENSOMEG00000005143	prdm5	99	61.308	Oryzias_melastigma
ENSPKIG00000015492	prdm5	81	52.703	ENSOGAG00000009996	PRDM5	98	47.510	Otolemur_garnettii
ENSPKIG00000015492	prdm5	89	52.542	ENSOARG00000015473	PRDM5	100	52.070	Ovis_aries
ENSPKIG00000015492	prdm5	99	48.101	ENSPPAG00000043045	PRDM5	99	51.248	Pan_paniscus
ENSPKIG00000015492	prdm5	99	55.556	ENSPPRG00000001020	PRDM5	100	53.229	Panthera_pardus
ENSPKIG00000015492	prdm5	93	53.700	ENSPTIG00000010807	PRDM5	95	51.476	Panthera_tigris_altaica
ENSPKIG00000015492	prdm5	100	87.288	ENSPTRG00000016403	PRDM5	100	87.288	Pan_troglodytes
ENSPKIG00000015492	prdm5	100	87.288	ENSPANG00000023612	PRDM5	100	87.288	Papio_anubis
ENSPKIG00000015492	prdm5	100	60.630	ENSPSIG00000013505	PRDM5	100	46.745	Pelodiscus_sinensis
ENSPKIG00000015492	prdm5	100	65.651	ENSPMGG00000012622	prdm5	100	55.829	Periophthalmus_magnuspinnatus
ENSPKIG00000015492	prdm5	73	53.403	ENSPMAG00000005248	prdm5	100	45.074	Petromyzon_marinus
ENSPKIG00000015492	prdm5	99	75.467	ENSPFOG00000018630	prdm5	99	75.733	Poecilia_formosa
ENSPKIG00000015492	prdm5	100	67.150	ENSPLAG00000014148	prdm5	100	62.929	Poecilia_latipinna
ENSPKIG00000015492	prdm5	100	67.667	ENSPMEG00000018002	prdm5	99	62.782	Poecilia_mexicana
ENSPKIG00000015492	prdm5	100	67.667	ENSPREG00000018366	prdm5	99	62.782	Poecilia_reticulata
ENSPKIG00000015492	prdm5	99	51.181	ENSPPYG00000015031	PRDM5	99	53.229	Pongo_abelii
ENSPKIG00000015492	prdm5	94	51.741	ENSPCAG00000011671	PRDM5	100	45.487	Procavia_capensis
ENSPKIG00000015492	prdm5	100	87.288	ENSPCOG00000022828	PRDM5	100	87.288	Propithecus_coquereli
ENSPKIG00000015492	prdm5	94	54.849	ENSPVAG00000012309	PRDM5	99	50.188	Pteropus_vampyrus
ENSPKIG00000015492	prdm5	100	66.667	ENSPNYG00000012194	prdm5	99	62.030	Pundamilia_nyererei
ENSPKIG00000015492	prdm5	100	66.612	ENSPNAG00000026181	prdm5	99	61.754	Pygocentrus_nattereri
ENSPKIG00000015492	prdm5	92	59.932	ENSPNAG00000023191	-	100	56.538	Pygocentrus_nattereri
ENSPKIG00000015492	prdm5	99	54.482	ENSRNOG00000023679	Prdm5	96	54.613	Rattus_norvegicus
ENSPKIG00000015492	prdm5	100	87.288	ENSRBIG00000041307	PRDM5	100	87.288	Rhinopithecus_bieti
ENSPKIG00000015492	prdm5	93	62.808	ENSRROG00000035343	PRDM5	99	62.998	Rhinopithecus_roxellana
ENSPKIG00000015492	prdm5	100	87.288	ENSSBOG00000022100	PRDM5	100	87.288	Saimiri_boliviensis_boliviensis
ENSPKIG00000015492	prdm5	89	49.697	ENSSHAG00000003250	PRDM5	100	51.172	Sarcophilus_harrisii
ENSPKIG00000015492	prdm5	100	66.283	ENSSFOG00015020478	prdm5	100	54.952	Scleropages_formosus
ENSPKIG00000015492	prdm5	100	67.554	ENSSMAG00000018844	prdm5	99	62.782	Scophthalmus_maximus
ENSPKIG00000015492	prdm5	100	67.055	ENSSDUG00000020397	prdm5	99	62.218	Seriola_dumerili
ENSPKIG00000015492	prdm5	100	67.055	ENSSLDG00000013353	prdm5	99	62.218	Seriola_lalandi_dorsalis
ENSPKIG00000015492	prdm5	81	88.889	ENSSARG00000014129	-	65	88.889	Sorex_araneus
ENSPKIG00000015492	prdm5	100	95.763	ENSSPUG00000009941	PRDM5	100	95.763	Sphenodon_punctatus
ENSPKIG00000015492	prdm5	100	68.599	ENSSPAG00000013866	prdm5	100	63.653	Stegastes_partitus
ENSPKIG00000015492	prdm5	100	58.226	ENSSSCG00000009101	PRDM5	100	54.446	Sus_scrofa
ENSPKIG00000015492	prdm5	94	59.567	ENSTGUG00000001920	PRDM5	100	55.263	Taeniopygia_guttata
ENSPKIG00000015492	prdm5	100	63.907	ENSTRUG00000013850	prdm5	99	61.308	Takifugu_rubripes
ENSPKIG00000015492	prdm5	100	51.310	ENSTNIG00000005901	prdm5	100	51.618	Tetraodon_nigroviridis
ENSPKIG00000015492	prdm5	93	62.943	ENSTBEG00000015386	PRDM5	85	64.850	Tupaia_belangeri
ENSPKIG00000015492	prdm5	100	52.113	ENSTTRG00000010996	PRDM5	100	53.752	Tursiops_truncatus
ENSPKIG00000015492	prdm5	93	51.992	ENSUAMG00000009994	PRDM5	90	46.964	Ursus_americanus
ENSPKIG00000015492	prdm5	94	49.670	ENSUMAG00000003733	PRDM5	99	50.923	Ursus_maritimus
ENSPKIG00000015492	prdm5	97	51.140	ENSVPAG00000007435	PRDM5	100	51.712	Vicugna_pacos
ENSPKIG00000015492	prdm5	92	48.658	ENSVVUG00000013192	PRDM5	100	50.566	Vulpes_vulpes
ENSPKIG00000015492	prdm5	100	60.821	ENSXETG00000002101	prdm5	100	35.620	Xenopus_tropicalis
ENSPKIG00000015492	prdm5	100	68.053	ENSXCOG00000008567	prdm5	99	62.782	Xiphophorus_couchianus
ENSPKIG00000015492	prdm5	100	68.053	ENSXMAG00000013825	prdm5	99	62.782	Xiphophorus_maculatus