EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000015511 (Gene tree)
Gene ID: -
Gene Symbol: trnau1apa
Alias: -
Full Name: tRNA selenocysteine 1 associated protein 1a
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Plus strand
Length: 4898 bases
Position: chrPGUA01000073.1:2148820-2153717
Accession: ZDB-GENE-050522-502
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000037250	RRM_1	PF00076.22	6.9e-24	1	2
ENSPKIP00000037250	RRM_1	PF00076.22	6.9e-24	2	2
ENSPKIP00000037272	RRM_1	PF00076.22	1.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000018234	-	700	-	ENSPKIP00000037272	190 (aa)	-	-
ENSPKIT00000018212	-	924	-	ENSPKIP00000037250	307 (aa)	-	-

Gene Model

Click here to download ENSPKIG00000015511's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000015511's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000015511	trnau1apa	57	31.646	ENSPKIG00000005676	pabpc1b	57	31.646
ENSPKIG00000015511	trnau1apa	58	49.438	ENSPKIG00000007995	trnau1apb	96	41.860
ENSPKIG00000015511	trnau1apa	92	76.842	ENSPKIG00000022205	-	94	76.842
ENSPKIG00000015511	trnau1apa	57	31.288	ENSPKIG00000025356	pabpc4	59	31.288

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000015511	trnau1apa	92	57.951	ENSG00000180098	TRNAU1AP	95	59.717	Homo_sapiens
ENSPKIG00000015511	trnau1apa	93	60.616	ENSAPOG00000007148	TRNAU1AP	93	60.616	Acanthochromis_polyacanthus
ENSPKIG00000015511	trnau1apa	92	57.951	ENSAMEG00000011367	TRNAU1AP	95	59.364	Ailuropoda_melanoleuca
ENSPKIG00000015511	trnau1apa	89	76.136	ENSACIG00000004161	trnau1apa	93	76.136	Amphilophus_citrinellus
ENSPKIG00000015511	trnau1apa	93	60.690	ENSAOCG00000008056	trnau1apa	93	61.856	Amphiprion_ocellaris
ENSPKIG00000015511	trnau1apa	93	60.690	ENSAPEG00000008868	trnau1apa	93	61.856	Amphiprion_percula
ENSPKIG00000015511	trnau1apa	93	57.966	ENSATEG00000012140	trnau1apa	93	58.644	Anabas_testudineus
ENSPKIG00000015511	trnau1apa	91	57.801	ENSAPLG00000002606	TRNAU1AP	98	58.214	Anas_platyrhynchos
ENSPKIG00000015511	trnau1apa	92	49.826	ENSACAG00000003995	-	95	51.228	Anolis_carolinensis
ENSPKIG00000015511	trnau1apa	92	36.571	ENSACAG00000004205	-	76	36.967	Anolis_carolinensis
ENSPKIG00000015511	trnau1apa	92	57.951	ENSANAG00000018976	TRNAU1AP	95	59.717	Aotus_nancymaae
ENSPKIG00000015511	trnau1apa	96	59.259	ENSACLG00000018515	trnau1apa	97	59.259	Astatotilapia_calliptera
ENSPKIG00000015511	trnau1apa	90	76.404	ENSAMXG00000029240	-	95	76.404	Astyanax_mexicanus
ENSPKIG00000015511	trnau1apa	93	56.690	ENSAMXG00000013750	trnau1apa	90	56.690	Astyanax_mexicanus
ENSPKIG00000015511	trnau1apa	92	57.951	ENSBTAG00000010393	TRNAU1AP	95	59.717	Bos_taurus
ENSPKIG00000015511	trnau1apa	92	57.951	ENSCJAG00000009717	TRNAU1AP	87	72.603	Callithrix_jacchus
ENSPKIG00000015511	trnau1apa	92	57.951	ENSCAFG00000011735	TRNAU1AP	95	59.717	Canis_familiaris
ENSPKIG00000015511	trnau1apa	92	57.951	ENSCAFG00020023584	TRNAU1AP	95	59.717	Canis_lupus_dingo
ENSPKIG00000015511	trnau1apa	92	57.951	ENSCHIG00000023215	TRNAU1AP	95	59.717	Capra_hircus
ENSPKIG00000015511	trnau1apa	92	57.951	ENSTSYG00000003506	TRNAU1AP	87	72.603	Carlito_syrichta
ENSPKIG00000015511	trnau1apa	92	57.951	ENSCPOG00000001925	TRNAU1AP	95	59.717	Cavia_porcellus
ENSPKIG00000015511	trnau1apa	92	57.951	ENSCCAG00000037506	TRNAU1AP	87	72.603	Cebus_capucinus
ENSPKIG00000015511	trnau1apa	92	57.951	ENSCATG00000044617	TRNAU1AP	87	72.603	Cercocebus_atys
ENSPKIG00000015511	trnau1apa	92	57.951	ENSCLAG00000008223	TRNAU1AP	95	59.717	Chinchilla_lanigera
ENSPKIG00000015511	trnau1apa	92	57.951	ENSCSAG00000001014	TRNAU1AP	95	59.717	Chlorocebus_sabaeus
ENSPKIG00000015511	trnau1apa	89	56.618	ENSCPBG00000000121	TRNAU1AP	95	57.721	Chrysemys_picta_bellii
ENSPKIG00000015511	trnau1apa	53	51.534	ENSCSAVG00000011781	-	86	51.534	Ciona_savignyi
ENSPKIG00000015511	trnau1apa	92	50.857	ENSCANG00000041949	TRNAU1AP	94	53.371	Colobus_angolensis_palliatus
ENSPKIG00000015511	trnau1apa	92	57.951	ENSCGRG00001004713	Trnau1ap	95	59.717	Cricetulus_griseus_chok1gshd
ENSPKIG00000015511	trnau1apa	92	57.951	ENSCGRG00000014532	Trnau1ap	95	59.717	Cricetulus_griseus_crigri
ENSPKIG00000015511	trnau1apa	93	59.524	ENSCSEG00000006663	trnau1apa	94	60.678	Cynoglossus_semilaevis
ENSPKIG00000015511	trnau1apa	94	57.047	ENSCVAG00000018069	trnau1apa	96	57.746	Cyprinodon_variegatus
ENSPKIG00000015511	trnau1apa	93	52.962	ENSDARG00000101323	trnau1apa	89	52.962	Danio_rerio
ENSPKIG00000015511	trnau1apa	92	57.951	ENSDNOG00000033009	TRNAU1AP	95	59.717	Dasypus_novemcinctus
ENSPKIG00000015511	trnau1apa	56	57.225	ENSDNOG00000047959	-	90	57.225	Dasypus_novemcinctus
ENSPKIG00000015511	trnau1apa	92	54.255	ENSDORG00000006349	Trnau1ap	99	57.917	Dipodomys_ordii
ENSPKIG00000015511	trnau1apa	91	34.268	FBgn0031607	CG15440	95	35.514	Drosophila_melanogaster
ENSPKIG00000015511	trnau1apa	94	46.629	ENSETEG00000012594	TRNAU1AP	96	55.102	Echinops_telfairi
ENSPKIG00000015511	trnau1apa	92	57.951	ENSEASG00005010062	TRNAU1AP	90	72.603	Equus_asinus_asinus
ENSPKIG00000015511	trnau1apa	92	57.951	ENSECAG00000012980	TRNAU1AP	90	72.603	Equus_caballus
ENSPKIG00000015511	trnau1apa	93	60.976	ENSELUG00000017686	trnau1apa	93	61.324	Esox_lucius
ENSPKIG00000015511	trnau1apa	92	78.125	ENSELUG00000022790	-	93	78.125	Esox_lucius
ENSPKIG00000015511	trnau1apa	92	57.951	ENSFCAG00000013401	TRNAU1AP	95	59.717	Felis_catus
ENSPKIG00000015511	trnau1apa	89	55.147	ENSFALG00000001371	TRNAU1AP	95	58.456	Ficedula_albicollis
ENSPKIG00000015511	trnau1apa	92	57.951	ENSFDAG00000018599	TRNAU1AP	95	59.717	Fukomys_damarensis
ENSPKIG00000015511	trnau1apa	77	59.426	ENSFHEG00000018232	trnau1apa	86	56.923	Fundulus_heteroclitus
ENSPKIG00000015511	trnau1apa	99	50.980	ENSGMOG00000016508	trnau1apa	99	54.397	Gadus_morhua
ENSPKIG00000015511	trnau1apa	92	55.477	ENSGALG00000001310	-	95	59.011	Gallus_gallus
ENSPKIG00000015511	trnau1apa	92	38.462	ENSGALG00000012721	C2H6orf52	85	40.909	Gallus_gallus
ENSPKIG00000015511	trnau1apa	77	58.159	ENSGAFG00000004928	trnau1apa	98	57.854	Gambusia_affinis
ENSPKIG00000015511	trnau1apa	93	58.885	ENSGACG00000001443	trnau1apa	93	59.516	Gasterosteus_aculeatus
ENSPKIG00000015511	trnau1apa	89	54.412	ENSGAGG00000004940	TRNAU1AP	95	57.721	Gopherus_agassizii
ENSPKIG00000015511	trnau1apa	92	57.951	ENSGGOG00000003511	TRNAU1AP	87	72.603	Gorilla_gorilla
ENSPKIG00000015511	trnau1apa	93	59.794	ENSHBUG00000002510	trnau1apa	94	59.794	Haplochromis_burtoni
ENSPKIG00000015511	trnau1apa	92	57.951	ENSHGLG00000010380	TRNAU1AP	95	59.717	Heterocephalus_glaber_female
ENSPKIG00000015511	trnau1apa	92	55.477	ENSHGLG00100012699	TRNAU1AP	95	57.244	Heterocephalus_glaber_male
ENSPKIG00000015511	trnau1apa	93	56.122	ENSHCOG00000014770	trnau1apa	93	56.122	Hippocampus_comes
ENSPKIG00000015511	trnau1apa	92	57.951	ENSSTOG00000000079	TRNAU1AP	95	59.717	Ictidomys_tridecemlineatus
ENSPKIG00000015511	trnau1apa	92	58.304	ENSJJAG00000010128	Trnau1ap	95	60.424	Jaculus_jaculus
ENSPKIG00000015511	trnau1apa	93	57.986	ENSKMAG00000001230	trnau1apa	93	58.333	Kryptolebias_marmoratus
ENSPKIG00000015511	trnau1apa	93	59.122	ENSLBEG00000011683	trnau1apa	93	59.933	Labrus_bergylta
ENSPKIG00000015511	trnau1apa	93	52.448	ENSLACG00000005541	TRNAU1AP	95	53.521	Latimeria_chalumnae
ENSPKIG00000015511	trnau1apa	96	61.204	ENSLOCG00000004041	trnau1apa	100	61.204	Lepisosteus_oculatus
ENSPKIG00000015511	trnau1apa	92	58.304	ENSLAFG00000007628	TRNAU1AP	95	60.071	Loxodonta_africana
ENSPKIG00000015511	trnau1apa	92	57.951	ENSMFAG00000043751	TRNAU1AP	87	72.603	Macaca_fascicularis
ENSPKIG00000015511	trnau1apa	92	57.951	ENSMMUG00000006561	TRNAU1AP	95	59.717	Macaca_mulatta
ENSPKIG00000015511	trnau1apa	92	57.951	ENSMNEG00000044201	TRNAU1AP	87	72.603	Macaca_nemestrina
ENSPKIG00000015511	trnau1apa	92	57.951	ENSMLEG00000015649	TRNAU1AP	87	72.603	Mandrillus_leucophaeus
ENSPKIG00000015511	trnau1apa	93	58.904	ENSMAMG00000001247	trnau1apa	94	60.678	Mastacembelus_armatus
ENSPKIG00000015511	trnau1apa	96	59.259	ENSMZEG00005017722	trnau1apa	97	59.259	Maylandia_zebra
ENSPKIG00000015511	trnau1apa	90	55.072	ENSMGAG00000002105	TRNAU1AP	95	57.971	Meleagris_gallopavo
ENSPKIG00000015511	trnau1apa	92	57.951	ENSMICG00000008386	TRNAU1AP	87	72.603	Microcebus_murinus
ENSPKIG00000015511	trnau1apa	92	57.951	ENSMOCG00000011189	Trnau1ap	95	59.717	Microtus_ochrogaster
ENSPKIG00000015511	trnau1apa	96	53.642	ENSMMOG00000012107	trnau1apa	97	54.636	Mola_mola
ENSPKIG00000015511	trnau1apa	92	59.011	ENSMODG00000010927	TRNAU1AP	95	59.011	Monodelphis_domestica
ENSPKIG00000015511	trnau1apa	93	60.690	ENSMALG00000016778	trnau1apa	93	61.092	Monopterus_albus
ENSPKIG00000015511	trnau1apa	92	57.951	MGP_CAROLIEiJ_G0026563	Trnau1ap	98	71.111	Mus_caroli
ENSPKIG00000015511	trnau1apa	92	57.951	ENSMUSG00000028898	Trnau1ap	98	71.111	Mus_musculus
ENSPKIG00000015511	trnau1apa	92	57.951	MGP_PahariEiJ_G0028896	Trnau1ap	98	71.111	Mus_pahari
ENSPKIG00000015511	trnau1apa	92	57.951	MGP_SPRETEiJ_G0027544	Trnau1ap	98	71.111	Mus_spretus
ENSPKIG00000015511	trnau1apa	92	57.951	ENSMPUG00000015511	TRNAU1AP	95	59.717	Mustela_putorius_furo
ENSPKIG00000015511	trnau1apa	92	57.951	ENSMLUG00000012586	TRNAU1AP	95	59.717	Myotis_lucifugus
ENSPKIG00000015511	trnau1apa	92	56.890	ENSNGAG00000015881	Trnau1ap	95	59.717	Nannospalax_galili
ENSPKIG00000015511	trnau1apa	96	51.667	ENSNBRG00000001758	trnau1apa	97	51.667	Neolamprologus_brichardi
ENSPKIG00000015511	trnau1apa	92	57.951	ENSNLEG00000009822	TRNAU1AP	87	72.603	Nomascus_leucogenys
ENSPKIG00000015511	trnau1apa	90	57.971	ENSMEUG00000006117	TRNAU1AP	95	57.971	Notamacropus_eugenii
ENSPKIG00000015511	trnau1apa	52	66.667	ENSOPRG00000007084	-	60	66.667	Ochotona_princeps
ENSPKIG00000015511	trnau1apa	92	57.951	ENSODEG00000002970	TRNAU1AP	95	59.717	Octodon_degus
ENSPKIG00000015511	trnau1apa	79	57.851	ENSONIG00000004715	trnau1apa	95	57.851	Oreochromis_niloticus
ENSPKIG00000015511	trnau1apa	93	48.070	ENSOANG00000005325	-	95	48.772	Ornithorhynchus_anatinus
ENSPKIG00000015511	trnau1apa	92	57.244	ENSOCUG00000011704	-	95	59.011	Oryctolagus_cuniculus
ENSPKIG00000015511	trnau1apa	85	48.473	ENSOCUG00000006834	-	98	48.473	Oryctolagus_cuniculus
ENSPKIG00000015511	trnau1apa	92	50.690	ENSOCUG00000002353	-	95	50.690	Oryctolagus_cuniculus
ENSPKIG00000015511	trnau1apa	96	56.333	ENSORLG00000010428	trnau1apa	97	56.811	Oryzias_latipes
ENSPKIG00000015511	trnau1apa	96	56.146	ENSORLG00020000926	trnau1ap	97	56.811	Oryzias_latipes_hni
ENSPKIG00000015511	trnau1apa	96	56.146	ENSORLG00015009858	trnau1ap	97	56.811	Oryzias_latipes_hsok
ENSPKIG00000015511	trnau1apa	96	57.143	ENSOMEG00000007873	trnau1apa	97	57.807	Oryzias_melastigma
ENSPKIG00000015511	trnau1apa	92	57.951	ENSOGAG00000002274	TRNAU1AP	95	59.717	Otolemur_garnettii
ENSPKIG00000015511	trnau1apa	92	57.951	ENSOARG00000002843	TRNAU1AP	95	59.717	Ovis_aries
ENSPKIG00000015511	trnau1apa	92	57.951	ENSPPAG00000033927	TRNAU1AP	87	72.603	Pan_paniscus
ENSPKIG00000015511	trnau1apa	92	57.951	ENSPPRG00000004416	TRNAU1AP	95	59.717	Panthera_pardus
ENSPKIG00000015511	trnau1apa	92	57.951	ENSPTIG00000016677	TRNAU1AP	95	59.717	Panthera_tigris_altaica
ENSPKIG00000015511	trnau1apa	85	49.231	ENSPTRG00000000434	-	90	51.154	Pan_troglodytes
ENSPKIG00000015511	trnau1apa	92	57.951	ENSPANG00000016019	TRNAU1AP	87	72.603	Papio_anubis
ENSPKIG00000015511	trnau1apa	89	56.934	ENSPSIG00000006864	TRNAU1AP	95	57.721	Pelodiscus_sinensis
ENSPKIG00000015511	trnau1apa	91	54.839	ENSPMGG00000023893	trnau1apa	90	54.839	Periophthalmus_magnuspinnatus
ENSPKIG00000015511	trnau1apa	92	57.597	ENSPEMG00000007877	Trnau1ap	95	59.364	Peromyscus_maniculatus_bairdii
ENSPKIG00000015511	trnau1apa	56	53.977	ENSPMAG00000000592	trnau1apa	97	53.977	Petromyzon_marinus
ENSPKIG00000015511	trnau1apa	74	49.780	ENSPMAG00000005934	trnau1apa	96	49.780	Petromyzon_marinus
ENSPKIG00000015511	trnau1apa	93	55.903	ENSPFOG00000008100	trnau1apa	93	57.931	Poecilia_formosa
ENSPKIG00000015511	trnau1apa	89	54.710	ENSPLAG00000010236	trnau1apa	93	56.835	Poecilia_latipinna
ENSPKIG00000015511	trnau1apa	92	54.007	ENSPMEG00000016387	trnau1apa	91	56.055	Poecilia_mexicana
ENSPKIG00000015511	trnau1apa	90	52.536	ENSPREG00000019821	trnau1apa	86	70.238	Poecilia_reticulata
ENSPKIG00000015511	trnau1apa	92	41.243	ENSPPYG00000001639	-	95	50.980	Pongo_abelii
ENSPKIG00000015511	trnau1apa	91	47.312	ENSPCOG00000023470	-	95	48.746	Propithecus_coquereli
ENSPKIG00000015511	trnau1apa	92	57.951	ENSPCOG00000027712	-	95	59.717	Propithecus_coquereli
ENSPKIG00000015511	trnau1apa	92	57.951	ENSPVAG00000017214	TRNAU1AP	95	59.717	Pteropus_vampyrus
ENSPKIG00000015511	trnau1apa	96	58.278	ENSPNYG00000010130	trnau1apa	98	58.039	Pundamilia_nyererei
ENSPKIG00000015511	trnau1apa	93	57.193	ENSPNAG00000024905	trnau1apa	91	57.193	Pygocentrus_nattereri
ENSPKIG00000015511	trnau1apa	84	55.212	ENSRNOG00000055344	Trnau1ap	85	57.143	Rattus_norvegicus
ENSPKIG00000015511	trnau1apa	92	57.951	ENSRBIG00000029083	TRNAU1AP	87	72.603	Rhinopithecus_bieti
ENSPKIG00000015511	trnau1apa	92	57.951	ENSRROG00000029128	TRNAU1AP	87	72.603	Rhinopithecus_roxellana
ENSPKIG00000015511	trnau1apa	92	57.951	ENSSBOG00000021299	TRNAU1AP	87	72.603	Saimiri_boliviensis_boliviensis
ENSPKIG00000015511	trnau1apa	92	59.717	ENSSHAG00000008108	TRNAU1AP	95	59.011	Sarcophilus_harrisii
ENSPKIG00000015511	trnau1apa	93	56.314	ENSSMAG00000020851	trnau1apa	94	57.338	Scophthalmus_maximus
ENSPKIG00000015511	trnau1apa	93	58.983	ENSSDUG00000011734	trnau1apa	93	59.932	Seriola_dumerili
ENSPKIG00000015511	trnau1apa	93	47.887	ENSSLDG00000012101	trnau1apa	91	50.352	Seriola_lalandi_dorsalis
ENSPKIG00000015511	trnau1apa	90	57.246	ENSSARG00000007536	TRNAU1AP	95	59.058	Sorex_araneus
ENSPKIG00000015511	trnau1apa	94	47.191	ENSSPUG00000010415	-	95	47.191	Sphenodon_punctatus
ENSPKIG00000015511	trnau1apa	92	54.737	ENSSPUG00000010400	-	95	55.477	Sphenodon_punctatus
ENSPKIG00000015511	trnau1apa	93	60.137	ENSSPAG00000005029	trnau1apa	93	60.481	Stegastes_partitus
ENSPKIG00000015511	trnau1apa	92	57.951	ENSSSCG00000030284	TRNAU1AP	95	59.717	Sus_scrofa
ENSPKIG00000015511	trnau1apa	92	43.182	ENSTGUG00000005908	-	92	47.917	Taeniopygia_guttata
ENSPKIG00000015511	trnau1apa	90	55.435	ENSTGUG00000000735	-	95	59.058	Taeniopygia_guttata
ENSPKIG00000015511	trnau1apa	93	58.276	ENSTRUG00000003352	trnau1apa	93	58.276	Takifugu_rubripes
ENSPKIG00000015511	trnau1apa	93	58.333	ENSTNIG00000006129	trnau1apa	93	58.333	Tetraodon_nigroviridis
ENSPKIG00000015511	trnau1apa	92	50.286	ENSTBEG00000008049	-	94	52.893	Tupaia_belangeri
ENSPKIG00000015511	trnau1apa	92	57.951	ENSTTRG00000001854	TRNAU1AP	95	59.717	Tursiops_truncatus
ENSPKIG00000015511	trnau1apa	89	56.985	ENSUAMG00000008789	TRNAU1AP	95	58.824	Ursus_americanus
ENSPKIG00000015511	trnau1apa	92	58.304	ENSUMAG00000011068	TRNAU1AP	95	59.717	Ursus_maritimus
ENSPKIG00000015511	trnau1apa	93	50.508	ENSVPAG00000006778	TRNAU1AP	96	52.203	Vicugna_pacos
ENSPKIG00000015511	trnau1apa	92	56.738	ENSVVUG00000012518	TRNAU1AP	89	58.246	Vulpes_vulpes
ENSPKIG00000015511	trnau1apa	93	55.556	ENSXMAG00000017361	trnau1apa	93	58.276	Xiphophorus_maculatus