EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000015630 (Gene tree)
Gene ID: 111859177
Gene Symbol: smpd3
Alias: -
Full Name: sphingomyelin phosphodiesterase 3
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Plus strand
Length: 35851 bases
Position: chrPGUA01000371.1:452256-488106
Accession: 111859177
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000037497	Exo_endo_phos	PF03372.23	5.7e-07	1	1
ENSPKIP00000037447	Exo_endo_phos	PF03372.23	1.8e-06	1	1
ENSPKIP00000037465	Exo_endo_phos	PF03372.23	1.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000018430	-	5259	-	ENSPKIP00000037465	727 (aa)	XP_023697408	UPI000CD631AE
ENSPKIT00000018412	-	5153	-	ENSPKIP00000037447	727 (aa)	XP_023697408	UPI000CD631AE
ENSPKIT00000018462	-	1929	-	ENSPKIP00000037497	642 (aa)	-	-

Gene Model

Click here to download ENSPKIG00000015630's gene model file

Pathways

Pathway ID	Pathway Name	Source
pki00600	Sphingolipid metabolism	KEGG
pki01100	Metabolic pathways	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000015630's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000015630	smpd3	85	51.899	ENSPKIG00000019783	smpd5	95	51.899

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000015630	smpd3	99	39.907	ENSAPOG00000005846	smpd5	97	48.750	Acanthochromis_polyacanthus
ENSPKIG00000015630	smpd3	55	59.091	ENSAMEG00000006154	-	96	41.100	Ailuropoda_melanoleuca
ENSPKIG00000015630	smpd3	99	39.783	ENSACIG00000015732	smpd5	99	39.783	Amphilophus_citrinellus
ENSPKIG00000015630	smpd3	83	48.750	ENSAOCG00000001729	smpd5	97	49.062	Amphiprion_ocellaris
ENSPKIG00000015630	smpd3	99	40.000	ENSAPEG00000010110	smpd5	97	48.750	Amphiprion_percula
ENSPKIG00000015630	smpd3	99	39.380	ENSATEG00000005476	smpd5	99	39.380	Anabas_testudineus
ENSPKIG00000015630	smpd3	72	45.779	ENSACAG00000005338	-	95	45.779	Anolis_carolinensis
ENSPKIG00000015630	smpd3	77	50.163	ENSACLG00000004150	smpd5	92	50.489	Astatotilapia_calliptera
ENSPKIG00000015630	smpd3	99	42.457	ENSAMXG00000015890	smpd5	93	52.412	Astyanax_mexicanus
ENSPKIG00000015630	smpd3	99	73.488	ENSAMXG00000009000	smpd3	99	77.698	Astyanax_mexicanus
ENSPKIG00000015630	smpd3	53	73.529	ENSCAFG00020018801	-	91	43.322	Canis_lupus_dingo
ENSPKIG00000015630	smpd3	73	49.836	ENSCPBG00000007123	-	93	49.191	Chrysemys_picta_bellii
ENSPKIG00000015630	smpd3	74	46.104	ENSCGRG00001020226	Smpd5	91	46.429	Cricetulus_griseus_chok1gshd
ENSPKIG00000015630	smpd3	74	46.104	ENSCGRG00000016807	Smpd5	91	46.429	Cricetulus_griseus_crigri
ENSPKIG00000015630	smpd3	73	48.060	ENSCSEG00000004339	smpd5	79	48.358	Cynoglossus_semilaevis
ENSPKIG00000015630	smpd3	99	38.725	ENSDARG00000059811	smpd5	92	47.335	Danio_rerio
ENSPKIG00000015630	smpd3	73	45.395	ENSEASG00005009745	-	92	45.395	Equus_asinus_asinus
ENSPKIG00000015630	smpd3	73	45.395	ENSECAG00000011998	-	92	45.395	Equus_caballus
ENSPKIG00000015630	smpd3	99	41.512	ENSELUG00000002998	smpd5	99	41.512	Esox_lucius
ENSPKIG00000015630	smpd3	99	57.292	ENSFCAG00000023364	SMPD3	99	61.098	Felis_catus
ENSPKIG00000015630	smpd3	63	51.415	ENSGMOG00000006983	smpd5	100	44.656	Gadus_morhua
ENSPKIG00000015630	smpd3	99	38.295	ENSGAFG00000005978	smpd5	99	42.336	Gambusia_affinis
ENSPKIG00000015630	smpd3	77	43.881	ENSGAGG00000010557	-	99	44.242	Gopherus_agassizii
ENSPKIG00000015630	smpd3	77	50.814	ENSHBUG00000017212	smpd5	92	51.140	Haplochromis_burtoni
ENSPKIG00000015630	smpd3	99	39.028	ENSHCOG00000005211	smpd5	90	49.837	Hippocampus_comes
ENSPKIG00000015630	smpd3	82	52.258	ENSIPUG00000007675	Smpd3	90	52.581	Ictalurus_punctatus
ENSPKIG00000015630	smpd3	74	45.779	ENSSTOG00000026841	-	93	45.779	Ictidomys_tridecemlineatus
ENSPKIG00000015630	smpd3	73	48.867	ENSKMAG00000014523	smpd5	93	49.191	Kryptolebias_marmoratus
ENSPKIG00000015630	smpd3	99	38.474	ENSLBEG00000000634	smpd5	98	38.474	Labrus_bergylta
ENSPKIG00000015630	smpd3	99	39.375	ENSMAMG00000012885	smpd5	99	39.375	Mastacembelus_armatus
ENSPKIG00000015630	smpd3	77	50.489	ENSMZEG00005014373	smpd5	98	39.308	Maylandia_zebra
ENSPKIG00000015630	smpd3	55	50.000	ENSMICG00000044882	-	95	44.516	Microcebus_murinus
ENSPKIG00000015630	smpd3	72	45.779	ENSMOCG00000004813	Smpd5	88	45.779	Microtus_ochrogaster
ENSPKIG00000015630	smpd3	99	52.671	ENSMODG00000005091	SMPD3	99	52.671	Monodelphis_domestica
ENSPKIG00000015630	smpd3	77	45.938	ENSMODG00000024098	-	95	45.938	Monodelphis_domestica
ENSPKIG00000015630	smpd3	55	54.000	ENSMPUG00000007287	-	97	47.039	Mustela_putorius_furo
ENSPKIG00000015630	smpd3	77	50.489	ENSNBRG00000015871	smpd5	98	39.465	Neolamprologus_brichardi
ENSPKIG00000015630	smpd3	58	60.622	ENSMEUG00000015228	-	92	60.724	Notamacropus_eugenii
ENSPKIG00000015630	smpd3	77	50.489	ENSONIG00000003005	smpd5	98	37.421	Oreochromis_niloticus
ENSPKIG00000015630	smpd3	99	38.341	ENSORLG00000007890	smpd5	98	38.341	Oryzias_latipes
ENSPKIG00000015630	smpd3	99	38.185	ENSORLG00020014621	smpd5	98	38.185	Oryzias_latipes_hni
ENSPKIG00000015630	smpd3	99	37.947	ENSORLG00015020862	smpd5	98	37.947	Oryzias_latipes_hsok
ENSPKIG00000015630	smpd3	99	38.654	ENSOMEG00000021400	smpd5	99	42.250	Oryzias_melastigma
ENSPKIG00000015630	smpd3	99	57.526	ENSPPRG00000012973	SMPD3	99	61.483	Panthera_pardus
ENSPKIG00000015630	smpd3	55	54.000	ENSPPRG00000024542	-	92	45.425	Panthera_pardus
ENSPKIG00000015630	smpd3	89	64.431	ENSPTIG00000006728	SMPD3	99	64.431	Panthera_tigris_altaica
ENSPKIG00000015630	smpd3	98	37.363	ENSPMGG00000011984	smpd5	98	45.860	Periophthalmus_magnuspinnatus
ENSPKIG00000015630	smpd3	68	44.300	ENSPEMG00000015740	Smpd5	88	44.300	Peromyscus_maniculatus_bairdii
ENSPKIG00000015630	smpd3	76	47.078	ENSPCIG00000009107	-	91	47.403	Phascolarctos_cinereus
ENSPKIG00000015630	smpd3	99	39.070	ENSPFOG00000002379	smpd5	99	39.070	Poecilia_formosa
ENSPKIG00000015630	smpd3	99	39.408	ENSPLAG00000015772	smpd5	99	39.408	Poecilia_latipinna
ENSPKIG00000015630	smpd3	99	38.785	ENSPMEG00000001599	smpd5	99	38.785	Poecilia_mexicana
ENSPKIG00000015630	smpd3	99	39.158	ENSPREG00000000831	smpd5	99	39.158	Poecilia_reticulata
ENSPKIG00000015630	smpd3	77	50.489	ENSPNYG00000015647	smpd5	92	50.814	Pundamilia_nyererei
ENSPKIG00000015630	smpd3	99	71.956	ENSPNAG00000001774	smpd3	99	71.956	Pygocentrus_nattereri
ENSPKIG00000015630	smpd3	99	41.369	ENSPNAG00000018539	smpd5	91	50.482	Pygocentrus_nattereri
ENSPKIG00000015630	smpd3	58	43.675	ENSSHAG00000004065	-	96	43.675	Sarcophilus_harrisii
ENSPKIG00000015630	smpd3	99	52.811	ENSSHAG00000006412	SMPD3	99	52.811	Sarcophilus_harrisii
ENSPKIG00000015630	smpd3	99	41.562	ENSSFOG00015000870	smpd5	99	49.091	Scleropages_formosus
ENSPKIG00000015630	smpd3	87	46.903	ENSSMAG00000020132	smpd5	95	46.647	Scophthalmus_maximus
ENSPKIG00000015630	smpd3	99	39.752	ENSSDUG00000005881	smpd5	99	39.752	Seriola_dumerili
ENSPKIG00000015630	smpd3	99	39.596	ENSSLDG00000015320	smpd5	99	39.596	Seriola_lalandi_dorsalis
ENSPKIG00000015630	smpd3	81	49.367	ENSSPAG00000007973	smpd5	96	49.367	Stegastes_partitus
ENSPKIG00000015630	smpd3	85	46.667	ENSTRUG00000014862	smpd5	94	46.944	Takifugu_rubripes
ENSPKIG00000015630	smpd3	99	38.846	ENSTNIG00000018420	smpd5	93	46.591	Tetraodon_nigroviridis
ENSPKIG00000015630	smpd3	73	51.923	ENSXETG00000031246	-	90	51.923	Xenopus_tropicalis
ENSPKIG00000015630	smpd3	99	60.870	ENSXETG00000006675	smpd3	93	68.217	Xenopus_tropicalis
ENSPKIG00000015630	smpd3	85	47.840	ENSXCOG00000019783	smpd5	93	48.882	Xiphophorus_couchianus
ENSPKIG00000015630	smpd3	99	38.331	ENSXMAG00000013998	smpd5	99	41.889	Xiphophorus_maculatus