EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000015699 (Gene tree)
Gene ID: 111837261
Gene Symbol: SMARCA5 (1 of many)
Alias: -
Full Name: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5-like
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Plus strand
Length: 10325 bases
Position: chrPGUA01000007.1:2733553-2743877
Accession: 111837261
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000037625	ResIII	PF04851.15	1.1e-10	1	1
ENSPKIP00000037678	ResIII	PF04851.15	1.2e-08	1	1
ENSPKIP00000037625	DEAD	PF00270.29	5.1e-07	1	1
ENSPKIP00000037678	DEAD	PF00270.29	4.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000018653	SMARCA5 (1 of many)-202	2565	-	ENSPKIP00000037678	854 (aa)	-	-
ENSPKIT00000018597	SMARCA5 (1 of many)-201	5021	-	ENSPKIP00000037625	1025 (aa)	XP_023654915	UPI000CD5FC90

Gene Model

Click here to download ENSPKIG00000015699's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000015699's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000015699	SMARCA5	98	92.781	ENSPKIG00000015885	SMARCA5	100	94.014
ENSPKIG00000015699	SMARCA5	56	39.279	ENSPKIG00000010890	hells	75	40.609
ENSPKIG00000015699	SMARCA5	50	31.656	ENSPKIG00000014974	rad54b	55	32.171
ENSPKIG00000015699	SMARCA5	96	82.871	ENSPKIG00000013411	smarca1	96	83.070
ENSPKIG00000015699	SMARCA5	61	42.533	ENSPKIG00000022166	chd1l	63	42.857
ENSPKIG00000015699	SMARCA5	51	30.498	ENSPKIG00000016172	rad54l	70	30.309

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000015699	SMARCA5	98	89.716	ENSG00000153147	SMARCA5	93	90.779	Homo_sapiens
ENSPKIG00000015699	SMARCA5	98	89.835	ENSAMEG00000009585	SMARCA5	93	90.881	Ailuropoda_melanoleuca
ENSPKIG00000015699	SMARCA5	96	89.247	ENSAPLG00000009206	SMARCA5	99	90.486	Anas_platyrhynchos
ENSPKIG00000015699	SMARCA5	98	89.953	ENSACAG00000003038	SMARCA5	94	90.881	Anolis_carolinensis
ENSPKIG00000015699	SMARCA5	98	89.835	ENSANAG00000019345	SMARCA5	98	90.881	Aotus_nancymaae
ENSPKIG00000015699	SMARCA5	98	89.835	ENSBTAG00000003399	SMARCA5	93	90.881	Bos_taurus
ENSPKIG00000015699	SMARCA5	98	89.835	ENSCJAG00000002735	SMARCA5	93	90.881	Callithrix_jacchus
ENSPKIG00000015699	SMARCA5	98	89.835	ENSCAFG00000007525	SMARCA5	93	90.881	Canis_familiaris
ENSPKIG00000015699	SMARCA5	96	90.073	ENSCAFG00020025641	SMARCA5	92	91.300	Canis_lupus_dingo
ENSPKIG00000015699	SMARCA5	98	88.298	ENSCHIG00000016375	-	95	89.447	Capra_hircus
ENSPKIG00000015699	SMARCA5	98	89.835	ENSCHIG00000013730	-	93	90.881	Capra_hircus
ENSPKIG00000015699	SMARCA5	98	89.716	ENSTSYG00000009954	SMARCA5	98	90.779	Carlito_syrichta
ENSPKIG00000015699	SMARCA5	98	89.243	ENSCAPG00000013747	SMARCA5	95	90.402	Cavia_aperea
ENSPKIG00000015699	SMARCA5	98	89.598	ENSCPOG00000002259	SMARCA5	93	90.676	Cavia_porcellus
ENSPKIG00000015699	SMARCA5	98	89.835	ENSCCAG00000027215	SMARCA5	98	90.881	Cebus_capucinus
ENSPKIG00000015699	SMARCA5	98	89.716	ENSCATG00000044917	SMARCA5	93	90.779	Cercocebus_atys
ENSPKIG00000015699	SMARCA5	98	89.716	ENSCLAG00000006153	SMARCA5	98	90.779	Chinchilla_lanigera
ENSPKIG00000015699	SMARCA5	98	89.716	ENSCSAG00000003448	SMARCA5	100	90.825	Chlorocebus_sabaeus
ENSPKIG00000015699	SMARCA5	98	88.534	ENSCHOG00000011724	SMARCA5	83	89.875	Choloepus_hoffmanni
ENSPKIG00000015699	SMARCA5	98	89.716	ENSCPBG00000027535	SMARCA5	94	90.881	Chrysemys_picta_bellii
ENSPKIG00000015699	SMARCA5	98	89.716	ENSCANG00000041629	SMARCA5	93	90.779	Colobus_angolensis_palliatus
ENSPKIG00000015699	SMARCA5	98	89.716	ENSCGRG00001012719	Smarca5	92	90.676	Cricetulus_griseus_chok1gshd
ENSPKIG00000015699	SMARCA5	98	89.716	ENSCGRG00000001417	Smarca5	97	90.676	Cricetulus_griseus_crigri
ENSPKIG00000015699	SMARCA5	98	87.352	ENSDNOG00000009158	SMARCA5	93	88.730	Dasypus_novemcinctus
ENSPKIG00000015699	SMARCA5	96	81.356	ENSDORG00000003466	Smarca5	97	83.562	Dipodomys_ordii
ENSPKIG00000015699	SMARCA5	98	83.333	ENSEBUG00000014773	SMARCA5	96	83.591	Eptatretus_burgeri
ENSPKIG00000015699	SMARCA5	98	89.835	ENSEASG00005001866	SMARCA5	98	91.162	Equus_asinus_asinus
ENSPKIG00000015699	SMARCA5	98	89.835	ENSECAG00000002676	SMARCA5	93	90.881	Equus_caballus
ENSPKIG00000015699	SMARCA5	98	85.697	ENSEEUG00000013176	SMARCA5	98	87.295	Erinaceus_europaeus
ENSPKIG00000015699	SMARCA5	98	91.736	ENSELUG00000014653	SMARCA5	99	92.673	Esox_lucius
ENSPKIG00000015699	SMARCA5	98	89.835	ENSFCAG00000004544	SMARCA5	93	90.881	Felis_catus
ENSPKIG00000015699	SMARCA5	98	90.071	ENSFALG00000004987	SMARCA5	100	91.237	Ficedula_albicollis
ENSPKIG00000015699	SMARCA5	98	89.716	ENSFDAG00000021016	SMARCA5	98	90.881	Fukomys_damarensis
ENSPKIG00000015699	SMARCA5	98	91.253	ENSGMOG00000007519	SMARCA5	100	87.718	Gadus_morhua
ENSPKIG00000015699	SMARCA5	98	90.307	ENSGALG00000009913	SMARCA5	94	91.393	Gallus_gallus
ENSPKIG00000015699	SMARCA5	98	92.553	ENSGACG00000017238	SMARCA5	97	91.583	Gasterosteus_aculeatus
ENSPKIG00000015699	SMARCA5	98	89.716	ENSGAGG00000019882	SMARCA5	94	90.779	Gopherus_agassizii
ENSPKIG00000015699	SMARCA5	98	89.716	ENSGGOG00000012595	SMARCA5	98	90.779	Gorilla_gorilla
ENSPKIG00000015699	SMARCA5	98	89.598	ENSHGLG00000000816	-	93	90.779	Heterocephalus_glaber_female
ENSPKIG00000015699	SMARCA5	98	80.851	ENSHGLG00000000317	-	93	82.275	Heterocephalus_glaber_female
ENSPKIG00000015699	SMARCA5	98	89.598	ENSHGLG00100018421	-	98	90.779	Heterocephalus_glaber_male
ENSPKIG00000015699	SMARCA5	98	89.716	ENSSTOG00000010683	SMARCA5	93	90.779	Ictidomys_tridecemlineatus
ENSPKIG00000015699	SMARCA5	98	89.953	ENSJJAG00000014965	Smarca5	93	90.881	Jaculus_jaculus
ENSPKIG00000015699	SMARCA5	98	90.307	ENSLACG00000007091	SMARCA5	98	90.222	Latimeria_chalumnae
ENSPKIG00000015699	SMARCA5	100	92.405	ENSLOCG00000008966	SMARCA5	100	92.308	Lepisosteus_oculatus
ENSPKIG00000015699	SMARCA5	98	89.835	ENSLAFG00000007795	SMARCA5	93	90.881	Loxodonta_africana
ENSPKIG00000015699	SMARCA5	98	89.716	ENSMFAG00000043649	SMARCA5	93	90.779	Macaca_fascicularis
ENSPKIG00000015699	SMARCA5	98	89.716	ENSMMUG00000000829	SMARCA5	97	91.043	Macaca_mulatta
ENSPKIG00000015699	SMARCA5	98	89.716	ENSMNEG00000031916	SMARCA5	93	90.779	Macaca_nemestrina
ENSPKIG00000015699	SMARCA5	98	89.716	ENSMLEG00000042393	SMARCA5	93	90.779	Mandrillus_leucophaeus
ENSPKIG00000015699	SMARCA5	98	90.307	ENSMGAG00000003517	SMARCA5	97	91.393	Meleagris_gallopavo
ENSPKIG00000015699	SMARCA5	98	89.716	ENSMAUG00000015902	Smarca5	96	90.676	Mesocricetus_auratus
ENSPKIG00000015699	SMARCA5	98	89.716	ENSMICG00000003971	SMARCA5	98	89.624	Microcebus_murinus
ENSPKIG00000015699	SMARCA5	98	89.362	ENSMOCG00000016986	-	93	90.369	Microtus_ochrogaster
ENSPKIG00000015699	SMARCA5	98	90.071	ENSMODG00000000391	SMARCA5	93	91.086	Monodelphis_domestica
ENSPKIG00000015699	SMARCA5	98	89.598	ENSMUSG00000031715	Smarca5	95	89.347	Mus_musculus
ENSPKIG00000015699	SMARCA5	98	89.716	MGP_PahariEiJ_G0022862	Smarca5	95	89.447	Mus_pahari
ENSPKIG00000015699	SMARCA5	98	89.835	ENSMLUG00000000468	SMARCA5	93	90.881	Myotis_lucifugus
ENSPKIG00000015699	SMARCA5	98	89.716	ENSNGAG00000000441	Smarca5	95	89.447	Nannospalax_galili
ENSPKIG00000015699	SMARCA5	98	89.716	ENSNLEG00000005383	SMARCA5	93	90.779	Nomascus_leucogenys
ENSPKIG00000015699	SMARCA5	98	83.215	ENSMEUG00000001267	SMARCA5	100	84.211	Notamacropus_eugenii
ENSPKIG00000015699	SMARCA5	87	94.764	ENSOPRG00000014427	SMARCA5	85	94.764	Ochotona_princeps
ENSPKIG00000015699	SMARCA5	98	90.071	ENSOANG00000013921	SMARCA5	100	91.134	Ornithorhynchus_anatinus
ENSPKIG00000015699	SMARCA5	98	89.716	ENSOCUG00000013042	SMARCA5	100	90.825	Oryctolagus_cuniculus
ENSPKIG00000015699	SMARCA5	98	89.716	ENSOGAG00000009702	SMARCA5	93	90.779	Otolemur_garnettii
ENSPKIG00000015699	SMARCA5	98	89.704	ENSOARG00000010589	SMARCA5	92	90.769	Ovis_aries
ENSPKIG00000015699	SMARCA5	98	89.598	ENSPPAG00000028523	SMARCA5	98	90.676	Pan_paniscus
ENSPKIG00000015699	SMARCA5	98	83.806	ENSPPRG00000004925	SMARCA5	92	86.270	Panthera_pardus
ENSPKIG00000015699	SMARCA5	98	89.835	ENSPTIG00000020959	SMARCA5	94	90.881	Panthera_tigris_altaica
ENSPKIG00000015699	SMARCA5	98	89.716	ENSPTRG00000016472	SMARCA5	98	90.779	Pan_troglodytes
ENSPKIG00000015699	SMARCA5	98	89.716	ENSPANG00000001175	SMARCA5	93	90.779	Papio_anubis
ENSPKIG00000015699	SMARCA5	98	87.352	ENSPSIG00000004177	SMARCA5	98	88.730	Pelodiscus_sinensis
ENSPKIG00000015699	SMARCA5	99	92.335	ENSPMGG00000012316	SMARCA5	100	92.894	Periophthalmus_magnuspinnatus
ENSPKIG00000015699	SMARCA5	98	89.716	ENSPEMG00000008060	Smarca5	96	90.676	Peromyscus_maniculatus_bairdii
ENSPKIG00000015699	SMARCA5	62	83.937	ENSPMAG00000008026	SMARCA5	99	83.937	Petromyzon_marinus
ENSPKIG00000015699	SMARCA5	97	68.688	ENSPMAG00000006011	SMARCA5	81	82.698	Petromyzon_marinus
ENSPKIG00000015699	SMARCA5	98	90.071	ENSPCIG00000003926	SMARCA5	93	91.086	Phascolarctos_cinereus
ENSPKIG00000015699	SMARCA5	98	89.716	ENSPPYG00000015091	SMARCA5	93	90.779	Pongo_abelii
ENSPKIG00000015699	SMARCA5	78	98.230	ENSPCAG00000014230	SMARCA5	84	87.000	Procavia_capensis
ENSPKIG00000015699	SMARCA5	98	86.864	ENSPCOG00000026744	SMARCA5	98	88.025	Propithecus_coquereli
ENSPKIG00000015699	SMARCA5	98	89.835	ENSPVAG00000006482	SMARCA5	93	90.779	Pteropus_vampyrus
ENSPKIG00000015699	SMARCA5	98	93.846	ENSPNAG00000027824	SMARCA5	97	94.381	Pygocentrus_nattereri
ENSPKIG00000015699	SMARCA5	98	89.598	ENSRNOG00000018149	Smarca5	99	89.347	Rattus_norvegicus
ENSPKIG00000015699	SMARCA5	98	89.716	ENSRBIG00000044644	SMARCA5	93	90.779	Rhinopithecus_bieti
ENSPKIG00000015699	SMARCA5	98	89.716	ENSRROG00000029591	SMARCA5	98	90.779	Rhinopithecus_roxellana
ENSPKIG00000015699	SMARCA5	98	89.835	ENSSBOG00000036257	SMARCA5	93	90.881	Saimiri_boliviensis_boliviensis
ENSPKIG00000015699	SMARCA5	98	90.071	ENSSHAG00000008464	SMARCA5	98	91.086	Sarcophilus_harrisii
ENSPKIG00000015699	SMARCA5	98	92.544	ENSSFOG00015013252	SMARCA5	95	92.806	Scleropages_formosus
ENSPKIG00000015699	SMARCA5	98	88.416	ENSSPUG00000007604	SMARCA5	97	91.049	Sphenodon_punctatus
ENSPKIG00000015699	SMARCA5	98	89.835	ENSSSCG00000009047	SMARCA5	93	90.881	Sus_scrofa
ENSPKIG00000015699	SMARCA5	98	89.953	ENSTGUG00000002408	SMARCA5	97	90.835	Taeniopygia_guttata
ENSPKIG00000015699	SMARCA5	96	90.073	ENSUAMG00000023495	SMARCA5	91	91.300	Ursus_americanus
ENSPKIG00000015699	SMARCA5	98	89.835	ENSUMAG00000015324	SMARCA5	95	90.881	Ursus_maritimus
ENSPKIG00000015699	SMARCA5	98	89.598	ENSVPAG00000008982	SMARCA5	93	90.676	Vicugna_pacos
ENSPKIG00000015699	SMARCA5	98	89.835	ENSVVUG00000017473	SMARCA5	93	90.881	Vulpes_vulpes
ENSPKIG00000015699	SMARCA5	92	88.917	ENSXETG00000017566	smarca5	93	89.719	Xenopus_tropicalis