EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000015703 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Minus strand
Length: 8573 bases
Position: chrPGUA01000073.1:2207075-2215647
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000037634	RRM_1	PF00076.22	3.4e-30	1	2
ENSPKIP00000037634	RRM_1	PF00076.22	3.4e-30	2	2
ENSPKIP00000037647	RRM_1	PF00076.22	6.5e-22	1	1
ENSPKIP00000037650	RRM_1	PF00076.22	4.3e-18	1	1
ENSPKIP00000037604	RRM_1	PF00076.22	6.1e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000018623	-	438	-	ENSPKIP00000037650	145 (aa)	-	-
ENSPKIT00000018576	-	384	-	ENSPKIP00000037604	127 (aa)	-	-
ENSPKIT00000018619	-	864	-	ENSPKIP00000037647	287 (aa)	-	-
ENSPKIT00000018606	-	963	-	ENSPKIP00000037634	320 (aa)	-	-

Gene Model

Click here to download ENSPKIG00000015703's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000015703's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000015703	-	95	54.777	ENSPKIG00000002054	srsf5a	66	62.637
ENSPKIG00000015703	-	89	40.336	ENSPKIG00000024851	SRSF9	69	41.270
ENSPKIG00000015703	-	98	79.412	ENSPKIG00000018463	-	83	76.190
ENSPKIG00000015703	-	56	48.000	ENSPKIG00000017425	srsf7b	81	33.566
ENSPKIG00000015703	-	83	72.973	ENSPKIG00000015603	-	86	76.667
ENSPKIG00000015703	-	57	46.053	ENSPKIG00000022669	SRSF7	51	46.053
ENSPKIG00000015703	-	89	33.898	ENSPKIG00000023787	srsf9	72	39.683
ENSPKIG00000015703	-	65	41.176	ENSPKIG00000004949	srsf3a	58	43.000
ENSPKIG00000015703	-	57	31.507	ENSPKIG00000023807	RALYL	80	32.051
ENSPKIG00000015703	-	65	40.000	ENSPKIG00000001408	-	60	41.000
ENSPKIG00000015703	-	52	33.784	ENSPKIG00000010561	cirbpa	60	35.714
ENSPKIG00000015703	-	96	41.379	ENSPKIG00000007204	srsf1a	69	45.665
ENSPKIG00000015703	-	96	42.069	ENSPKIG00000012857	srsf1b	66	45.763
ENSPKIG00000015703	-	55	34.615	ENSPKIG00000024430	CIRBP	86	34.615

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000015703	-	95	61.745	ENSG00000124193	SRSF6	59	77.500	Homo_sapiens
ENSPKIG00000015703	-	97	59.124	ENSAPOG00000016635	-	87	67.143	Acanthochromis_polyacanthus
ENSPKIG00000015703	-	95	41.830	ENSAMEG00000003710	SRSF6	52	60.556	Ailuropoda_melanoleuca
ENSPKIG00000015703	-	95	60.690	ENSACIG00000020091	-	96	68.217	Amphilophus_citrinellus
ENSPKIG00000015703	-	95	60.135	ENSACIG00000023658	-	55	74.444	Amphilophus_citrinellus
ENSPKIG00000015703	-	95	61.644	ENSAOCG00000004309	-	55	73.596	Amphiprion_ocellaris
ENSPKIG00000015703	-	57	79.167	ENSAOCG00000019438	-	95	60.177	Amphiprion_ocellaris
ENSPKIG00000015703	-	83	68.103	ENSAPEG00000020746	-	63	72.067	Amphiprion_percula
ENSPKIG00000015703	-	95	60.927	ENSAPEG00000013086	-	52	73.370	Amphiprion_percula
ENSPKIG00000015703	-	86	66.154	ENSATEG00000007255	-	69	70.330	Anabas_testudineus
ENSPKIG00000015703	-	95	62.585	ENSACAG00000002061	SRSF6	77	75.362	Anolis_carolinensis
ENSPKIG00000015703	-	95	61.745	ENSANAG00000024080	SRSF6	59	77.500	Aotus_nancymaae
ENSPKIG00000015703	-	54	73.913	ENSACLG00000024373	-	89	71.264	Astatotilapia_calliptera
ENSPKIG00000015703	-	95	55.921	ENSAMXG00000042692	-	94	70.229	Astyanax_mexicanus
ENSPKIG00000015703	-	95	60.784	ENSAMXG00000003101	-	65	60.569	Astyanax_mexicanus
ENSPKIG00000015703	-	95	60.403	ENSBTAG00000008527	SRSF6	59	76.250	Bos_taurus
ENSPKIG00000015703	-	95	61.745	ENSCJAG00000048403	SRSF6	66	75.691	Callithrix_jacchus
ENSPKIG00000015703	-	95	60.403	ENSCAFG00000009289	SRSF6	59	76.250	Canis_familiaris
ENSPKIG00000015703	-	95	60.403	ENSCAFG00020013559	SRSF6	59	76.250	Canis_lupus_dingo
ENSPKIG00000015703	-	95	59.060	ENSCHIG00000009148	-	52	73.481	Capra_hircus
ENSPKIG00000015703	-	95	60.403	ENSCHIG00000015890	-	59	76.250	Capra_hircus
ENSPKIG00000015703	-	95	61.745	ENSCPOG00000011761	SRSF6	59	77.500	Cavia_porcellus
ENSPKIG00000015703	-	95	56.000	ENSCCAG00000018540	-	58	66.298	Cebus_capucinus
ENSPKIG00000015703	-	95	61.745	ENSCCAG00000026018	-	59	77.500	Cebus_capucinus
ENSPKIG00000015703	-	95	61.745	ENSCATG00000030794	SRSF6	59	77.500	Cercocebus_atys
ENSPKIG00000015703	-	95	61.745	ENSCLAG00000010247	SRSF6	59	77.500	Chinchilla_lanigera
ENSPKIG00000015703	-	95	61.745	ENSCSAG00000014022	SRSF6	52	75.691	Chlorocebus_sabaeus
ENSPKIG00000015703	-	60	75.000	ENSCHOG00000000561	SRSF6	52	53.933	Choloepus_hoffmanni
ENSPKIG00000015703	-	95	61.745	ENSCANG00000037774	-	52	74.586	Colobus_angolensis_palliatus
ENSPKIG00000015703	-	95	60.403	ENSCGRG00001022339	Srsf6	59	75.000	Cricetulus_griseus_chok1gshd
ENSPKIG00000015703	-	97	66.400	ENSCSEG00000019778	SRSF6	88	75.214	Cynoglossus_semilaevis
ENSPKIG00000015703	-	91	69.672	ENSCVAG00000001863	SRSF6	96	72.000	Cyprinodon_variegatus
ENSPKIG00000015703	-	95	57.516	ENSDARG00000016783	srsf6b	88	71.429	Danio_rerio
ENSPKIG00000015703	-	95	61.745	ENSDNOG00000008410	SRSF6	51	75.691	Dasypus_novemcinctus
ENSPKIG00000015703	-	95	61.745	ENSDORG00000028378	Srsf6	59	77.500	Dipodomys_ordii
ENSPKIG00000015703	-	97	61.832	ENSETEG00000006221	SRSF6	51	73.596	Echinops_telfairi
ENSPKIG00000015703	-	95	60.403	ENSEASG00005023429	SRSF6	52	74.586	Equus_asinus_asinus
ENSPKIG00000015703	-	95	60.403	ENSECAG00000023932	SRSF6	55	74.586	Equus_caballus
ENSPKIG00000015703	-	92	65.385	ENSELUG00000024182	SRSF6	87	71.901	Esox_lucius
ENSPKIG00000015703	-	95	61.224	ENSELUG00000013506	SRSF6	78	71.264	Esox_lucius
ENSPKIG00000015703	-	95	60.403	ENSFCAG00000032814	SRSF6	52	74.586	Felis_catus
ENSPKIG00000015703	-	93	75.000	ENSFHEG00000023065	srsf6a	53	74.302	Fundulus_heteroclitus
ENSPKIG00000015703	-	96	60.284	ENSGMOG00000006105	srsf6a	61	64.205	Gadus_morhua
ENSPKIG00000015703	-	95	59.615	ENSGALG00000000990	SRSF6	53	81.944	Gallus_gallus
ENSPKIG00000015703	-	97	62.222	ENSGAFG00000019088	-	70	71.074	Gambusia_affinis
ENSPKIG00000015703	-	98	65.753	ENSGACG00000006084	srsf6a	51	70.652	Gasterosteus_aculeatus
ENSPKIG00000015703	-	95	61.745	ENSGGOG00000009808	SRSF6	59	77.500	Gorilla_gorilla
ENSPKIG00000015703	-	83	68.468	ENSHBUG00000006386	-	56	74.157	Haplochromis_burtoni
ENSPKIG00000015703	-	95	61.745	ENSHGLG00000007348	SRSF6	59	77.500	Heterocephalus_glaber_female
ENSPKIG00000015703	-	96	52.778	ENSHGLG00000007701	-	55	60.221	Heterocephalus_glaber_female
ENSPKIG00000015703	-	95	63.889	ENSHCOG00000002740	srsf6a	55	73.743	Hippocampus_comes
ENSPKIG00000015703	-	95	63.699	ENSIPUG00000004776	-	79	75.362	Ictalurus_punctatus
ENSPKIG00000015703	-	91	62.044	ENSIPUG00000016856	SRSF6	92	46.688	Ictalurus_punctatus
ENSPKIG00000015703	-	95	61.745	ENSSTOG00000010866	SRSF6	59	77.500	Ictidomys_tridecemlineatus
ENSPKIG00000015703	-	95	62.143	ENSKMAG00000011934	srsf6a	78	42.781	Kryptolebias_marmoratus
ENSPKIG00000015703	-	95	61.589	ENSLBEG00000007356	srsf6a	50	72.678	Labrus_bergylta
ENSPKIG00000015703	-	95	65.772	ENSLACG00000005466	SRSF6	53	74.595	Latimeria_chalumnae
ENSPKIG00000015703	-	95	61.745	ENSMFAG00000036925	SRSF6	59	77.500	Macaca_fascicularis
ENSPKIG00000015703	-	95	61.745	ENSMMUG00000006742	SRSF6	59	77.500	Macaca_mulatta
ENSPKIG00000015703	-	95	61.074	ENSMNEG00000038270	-	52	75.138	Macaca_nemestrina
ENSPKIG00000015703	-	95	61.074	ENSMNEG00000027392	-	59	76.250	Macaca_nemestrina
ENSPKIG00000015703	-	95	60.927	ENSMAMG00000017161	srsf6a	52	73.370	Mastacembelus_armatus
ENSPKIG00000015703	-	70	67.416	ENSMAMG00000023477	-	96	69.663	Mastacembelus_armatus
ENSPKIG00000015703	-	84	67.857	ENSMZEG00005008032	-	55	74.157	Maylandia_zebra
ENSPKIG00000015703	-	97	63.636	ENSMZEG00005020658	-	60	72.222	Maylandia_zebra
ENSPKIG00000015703	-	61	75.000	ENSMAUG00000019086	-	59	75.000	Mesocricetus_auratus
ENSPKIG00000015703	-	95	61.745	ENSMICG00000008537	SRSF6	59	77.500	Microcebus_murinus
ENSPKIG00000015703	-	57	80.556	ENSMMOG00000015241	-	86	69.565	Mola_mola
ENSPKIG00000015703	-	95	62.667	ENSMODG00000003107	SRSF6	52	76.503	Monodelphis_domestica
ENSPKIG00000015703	-	95	60.403	MGP_CAROLIEiJ_G0024606	Srsf6	59	75.000	Mus_caroli
ENSPKIG00000015703	-	95	60.403	ENSMUSG00000016921	Srsf6	59	75.000	Mus_musculus
ENSPKIG00000015703	-	95	60.403	MGP_PahariEiJ_G0026050	Srsf6	59	75.000	Mus_pahari
ENSPKIG00000015703	-	95	60.403	MGP_SPRETEiJ_G0025528	Srsf6	59	75.000	Mus_spretus
ENSPKIG00000015703	-	95	60.403	ENSMPUG00000017692	SRSF6	62	74.586	Mustela_putorius_furo
ENSPKIG00000015703	-	95	61.745	ENSNGAG00000017560	Srsf6	59	77.500	Nannospalax_galili
ENSPKIG00000015703	-	83	68.468	ENSNBRG00000014709	-	82	75.362	Neolamprologus_brichardi
ENSPKIG00000015703	-	95	60.265	ENSNBRG00000001846	-	77	73.913	Neolamprologus_brichardi
ENSPKIG00000015703	-	95	61.745	ENSNLEG00000006524	SRSF6	59	77.500	Nomascus_leucogenys
ENSPKIG00000015703	-	95	62.667	ENSMEUG00000014615	SRSF6	59	76.503	Notamacropus_eugenii
ENSPKIG00000015703	-	61	77.500	ENSODEG00000016510	-	59	77.500	Octodon_degus
ENSPKIG00000015703	-	95	60.959	ENSONIG00000020247	-	60	68.269	Oreochromis_niloticus
ENSPKIG00000015703	-	95	60.927	ENSONIG00000001925	-	50	73.370	Oreochromis_niloticus
ENSPKIG00000015703	-	82	39.669	ENSOCUG00000023999	-	70	48.315	Oryctolagus_cuniculus
ENSPKIG00000015703	-	95	44.516	ENSOCUG00000009785	-	61	59.162	Oryctolagus_cuniculus
ENSPKIG00000015703	-	83	70.270	ENSORLG00020017506	srsf6a	86	61.074	Oryzias_latipes_hni
ENSPKIG00000015703	-	86	60.000	ENSOMEG00000006001	srsf6a	55	55.349	Oryzias_melastigma
ENSPKIG00000015703	-	95	61.745	ENSOGAG00000014468	SRSF6	88	55.663	Otolemur_garnettii
ENSPKIG00000015703	-	95	58.784	ENSOARG00000003117	SRSF6	51	70.652	Ovis_aries
ENSPKIG00000015703	-	89	63.478	ENSPPAG00000043131	-	55	65.746	Pan_paniscus
ENSPKIG00000015703	-	95	60.403	ENSPPRG00000008917	SRSF6	52	74.586	Panthera_pardus
ENSPKIG00000015703	-	95	61.745	ENSPTRG00000044686	-	59	77.500	Pan_troglodytes
ENSPKIG00000015703	-	89	63.478	ENSPTRG00000046274	-	55	65.746	Pan_troglodytes
ENSPKIG00000015703	-	95	61.745	ENSPANG00000035224	SRSF6	59	77.500	Papio_anubis
ENSPKIG00000015703	-	95	62.416	ENSPMGG00000014963	srsf6a	53	72.826	Periophthalmus_magnuspinnatus
ENSPKIG00000015703	-	95	62.667	ENSPCIG00000003820	SRSF6	59	78.750	Phascolarctos_cinereus
ENSPKIG00000015703	-	95	61.842	ENSPLAG00000009243	srsf6a	78	70.079	Poecilia_latipinna
ENSPKIG00000015703	-	95	62.000	ENSPMEG00000006042	SRSF6	88	55.663	Poecilia_mexicana
ENSPKIG00000015703	-	83	68.644	ENSPREG00000001040	srsf6a	85	72.441	Poecilia_reticulata
ENSPKIG00000015703	-	83	68.696	ENSPCAG00000010954	SRSF6	54	75.691	Procavia_capensis
ENSPKIG00000015703	-	95	61.745	ENSPCOG00000026364	SRSF6	59	77.500	Propithecus_coquereli
ENSPKIG00000015703	-	95	60.265	ENSPNYG00000011272	-	53	73.913	Pundamilia_nyererei
ENSPKIG00000015703	-	83	68.468	ENSPNYG00000004944	-	82	75.362	Pundamilia_nyererei
ENSPKIG00000015703	-	83	72.072	ENSPNAG00000023179	-	92	74.167	Pygocentrus_nattereri
ENSPKIG00000015703	-	95	60.403	ENSRNOG00000006380	Srsf6	53	74.586	Rattus_norvegicus
ENSPKIG00000015703	-	95	63.889	ENSRBIG00000041414	SRSF6	55	80.556	Rhinopithecus_bieti
ENSPKIG00000015703	-	95	61.745	ENSRROG00000029989	SRSF6	59	77.500	Rhinopithecus_roxellana
ENSPKIG00000015703	-	95	61.745	ENSSBOG00000033708	-	59	77.500	Saimiri_boliviensis_boliviensis
ENSPKIG00000015703	-	86	57.143	ENSSBOG00000034078	-	53	63.128	Saimiri_boliviensis_boliviensis
ENSPKIG00000015703	-	95	62.667	ENSSHAG00000012805	SRSF6	52	76.503	Sarcophilus_harrisii
ENSPKIG00000015703	-	95	61.486	ENSSFOG00015015169	SRSF6	58	75.000	Scleropages_formosus
ENSPKIG00000015703	-	95	59.375	ENSSFOG00015019681	-	84	54.516	Scleropages_formosus
ENSPKIG00000015703	-	57	80.556	ENSSMAG00000014861	-	96	53.077	Scophthalmus_maximus
ENSPKIG00000015703	-	83	65.487	ENSSMAG00000017447	-	54	72.222	Scophthalmus_maximus
ENSPKIG00000015703	-	95	60.927	ENSSDUG00000016097	srsf6a	52	73.370	Seriola_dumerili
ENSPKIG00000015703	-	70	67.416	ENSSDUG00000011036	-	95	71.264	Seriola_dumerili
ENSPKIG00000015703	-	70	67.416	ENSSLDG00000014858	-	95	71.264	Seriola_lalandi_dorsalis
ENSPKIG00000015703	-	95	60.927	ENSSLDG00000022841	srsf6a	52	73.370	Seriola_lalandi_dorsalis
ENSPKIG00000015703	-	95	63.265	ENSSPUG00000004967	SRSF6	84	76.812	Sphenodon_punctatus
ENSPKIG00000015703	-	95	61.688	ENSSPAG00000002362	srsf6a	55	60.897	Stegastes_partitus
ENSPKIG00000015703	-	63	72.500	ENSSPAG00000021913	-	91	69.663	Stegastes_partitus
ENSPKIG00000015703	-	95	60.403	ENSSSCG00000007362	SRSF6	59	74.586	Sus_scrofa
ENSPKIG00000015703	-	95	62.000	ENSTGUG00000003455	SRSF6	51	75.275	Taeniopygia_guttata
ENSPKIG00000015703	-	57	79.167	ENSTRUG00000021397	-	78	79.167	Takifugu_rubripes
ENSPKIG00000015703	-	95	60.265	ENSTNIG00000001692	srsf6a	77	73.913	Tetraodon_nigroviridis
ENSPKIG00000015703	-	95	60.403	ENSUAMG00000003559	SRSF6	59	76.250	Ursus_americanus
ENSPKIG00000015703	-	61	46.250	ENSVVUG00000019276	-	57	46.250	Vulpes_vulpes
ENSPKIG00000015703	-	95	63.265	ENSXMAG00000021849	srsf6a	53	74.860	Xiphophorus_maculatus