EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPKIG00000015861 (Gene tree)
Gene ID: 111835500
Gene Symbol: NCBP1
Alias: -
Full Name: nuclear cap binding protein subunit 1
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Plus strand
Length: 11723 bases
Position: chrPGUA01000053.1:2460930-2472652
Accession: 111835500
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000037898	MIF4G_like	PF09088.11	8.3e-38	1	1
ENSPKIP00000037844	MIF4G_like	PF09088.11	9.2e-38	1	1
ENSPKIP00000037898	MIF4G_like_2	PF09090.11	2.7e-87	1	1
ENSPKIP00000037844	MIF4G_like_2	PF09090.11	5.1e-87	1	1
ENSPKIP00000037844	MIF4G	PF02854.19	1.4e-26	1	1
ENSPKIP00000037898	MIF4G	PF02854.19	5.1e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000018824	NCBP1-201	4034	XM_023795885	ENSPKIP00000037844	794 (aa)	XP_023651653	UPI000CD664D9
ENSPKIT00000018883	NCBP1-202	4237	-	ENSPKIP00000037898	761 (aa)	-	-

Gene Model

Click here to download ENSPKIG00000015861's gene model file

Pathways

Pathway ID	Pathway Name	Source
pki03013	RNA transport	KEGG
pki03015	mRNA surveillance pathway	KEGG
pki03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000015861's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000015861	NCBP1	100	81.006	ENSG00000136937	NCBP1	100	81.132	Homo_sapiens
ENSPKIG00000015861	NCBP1	99	87.516	ENSAPOG00000008002	NCBP1	99	87.516	Acanthochromis_polyacanthus
ENSPKIG00000015861	NCBP1	100	81.054	ENSAMEG00000004763	NCBP1	100	81.179	Ailuropoda_melanoleuca
ENSPKIG00000015861	NCBP1	99	87.657	ENSACIG00000000274	NCBP1	99	87.657	Amphilophus_citrinellus
ENSPKIG00000015861	NCBP1	99	87.154	ENSAOCG00000021148	NCBP1	99	87.154	Amphiprion_ocellaris
ENSPKIG00000015861	NCBP1	99	87.154	ENSAPEG00000001701	NCBP1	99	87.154	Amphiprion_percula
ENSPKIG00000015861	NCBP1	99	88.161	ENSATEG00000006929	NCBP1	99	88.161	Anabas_testudineus
ENSPKIG00000015861	NCBP1	99	81.340	ENSAPLG00000016318	NCBP1	100	80.946	Anas_platyrhynchos
ENSPKIG00000015861	NCBP1	100	81.273	ENSACAG00000004409	NCBP1	87	80.673	Anolis_carolinensis
ENSPKIG00000015861	NCBP1	99	81.167	ENSANAG00000025744	NCBP1	99	80.716	Aotus_nancymaae
ENSPKIG00000015861	NCBP1	99	87.909	ENSACLG00000014812	NCBP1	99	87.909	Astatotilapia_calliptera
ENSPKIG00000015861	NCBP1	99	89.447	ENSAMXG00000016364	NCBP1	99	89.447	Astyanax_mexicanus
ENSPKIG00000015861	NCBP1	100	81.132	ENSBTAG00000009732	NCBP1	99	87.613	Bos_taurus
ENSPKIG00000015861	NCBP1	99	35.135	WBGene00018156	ncbp-1	99	34.761	Caenorhabditis_elegans
ENSPKIG00000015861	NCBP1	100	81.006	ENSCJAG00000010840	NCBP1	99	85.476	Callithrix_jacchus
ENSPKIG00000015861	NCBP1	100	81.132	ENSCAFG00000002445	NCBP1	100	81.258	Canis_familiaris
ENSPKIG00000015861	NCBP1	99	81.192	ENSCAFG00020017997	NCBP1	96	87.811	Canis_lupus_dingo
ENSPKIG00000015861	NCBP1	100	81.258	ENSCHIG00000020139	NCBP1	100	81.384	Capra_hircus
ENSPKIG00000015861	NCBP1	51	87.313	ENSTSYG00000011914	NCBP1	98	86.834	Carlito_syrichta
ENSPKIG00000015861	NCBP1	85	73.994	ENSCAPG00000014252	NCBP1	90	73.994	Cavia_aperea
ENSPKIG00000015861	NCBP1	99	81.192	ENSCPOG00000012573	NCBP1	99	80.871	Cavia_porcellus
ENSPKIG00000015861	NCBP1	100	81.006	ENSCCAG00000032297	NCBP1	100	81.132	Cebus_capucinus
ENSPKIG00000015861	NCBP1	100	81.006	ENSCATG00000010052	NCBP1	100	81.132	Cercocebus_atys
ENSPKIG00000015861	NCBP1	100	81.132	ENSCLAG00000014339	NCBP1	100	81.258	Chinchilla_lanigera
ENSPKIG00000015861	NCBP1	100	81.006	ENSCSAG00000010929	NCBP1	100	81.132	Chlorocebus_sabaeus
ENSPKIG00000015861	NCBP1	89	77.570	ENSCHOG00000010332	NCBP1	91	74.138	Choloepus_hoffmanni
ENSPKIG00000015861	NCBP1	100	79.975	ENSCPBG00000024344	NCBP1	99	81.680	Chrysemys_picta_bellii
ENSPKIG00000015861	NCBP1	99	55.164	ENSCING00000008990	-	99	55.038	Ciona_intestinalis
ENSPKIG00000015861	NCBP1	99	54.750	ENSCSAVG00000005300	-	99	54.124	Ciona_savignyi
ENSPKIG00000015861	NCBP1	100	81.006	ENSCANG00000036913	NCBP1	100	81.132	Colobus_angolensis_palliatus
ENSPKIG00000015861	NCBP1	100	80.377	ENSCGRG00001015771	Ncbp1	100	80.503	Cricetulus_griseus_chok1gshd
ENSPKIG00000015861	NCBP1	99	80.530	ENSCGRG00000010311	Ncbp1	100	80.510	Cricetulus_griseus_crigri
ENSPKIG00000015861	NCBP1	99	87.028	ENSCSEG00000012377	NCBP1	99	87.028	Cynoglossus_semilaevis
ENSPKIG00000015861	NCBP1	99	87.296	ENSCVAG00000008795	NCBP1	99	87.296	Cyprinodon_variegatus
ENSPKIG00000015861	NCBP1	100	80.881	ENSDNOG00000006885	NCBP1	100	81.006	Dasypus_novemcinctus
ENSPKIG00000015861	NCBP1	100	76.971	ENSDORG00000013652	Ncbp1	100	77.096	Dipodomys_ordii
ENSPKIG00000015861	NCBP1	82	34.071	FBgn0038887	CG7907	87	33.826	Drosophila_melanogaster
ENSPKIG00000015861	NCBP1	100	56.750	FBgn0022942	Cbp80	100	56.750	Drosophila_melanogaster
ENSPKIG00000015861	NCBP1	89	75.594	ENSETEG00000009705	NCBP1	89	75.594	Echinops_telfairi
ENSPKIG00000015861	NCBP1	100	72.522	ENSEBUG00000008386	NCBP1	100	72.522	Eptatretus_burgeri
ENSPKIG00000015861	NCBP1	100	80.629	ENSEASG00005022795	NCBP1	100	80.755	Equus_asinus_asinus
ENSPKIG00000015861	NCBP1	100	80.755	ENSECAG00000013847	NCBP1	100	80.881	Equus_caballus
ENSPKIG00000015861	NCBP1	95	77.543	ENSEEUG00000015973	NCBP1	99	77.543	Erinaceus_europaeus
ENSPKIG00000015861	NCBP1	99	89.057	ENSELUG00000022519	NCBP1	99	89.057	Esox_lucius
ENSPKIG00000015861	NCBP1	100	81.006	ENSFCAG00000001206	NCBP1	100	81.132	Felis_catus
ENSPKIG00000015861	NCBP1	99	81.662	ENSFALG00000001193	NCBP1	100	82.061	Ficedula_albicollis
ENSPKIG00000015861	NCBP1	100	81.006	ENSFDAG00000010864	NCBP1	100	81.132	Fukomys_damarensis
ENSPKIG00000015861	NCBP1	99	87.170	ENSFHEG00000000655	NCBP1	99	87.170	Fundulus_heteroclitus
ENSPKIG00000015861	NCBP1	99	86.164	ENSGMOG00000008653	NCBP1	99	86.164	Gadus_morhua
ENSPKIG00000015861	NCBP1	99	81.722	ENSGALG00000002087	NCBP1	100	81.681	Gallus_gallus
ENSPKIG00000015861	NCBP1	99	87.799	ENSGAFG00000017787	NCBP1	99	87.925	Gambusia_affinis
ENSPKIG00000015861	NCBP1	99	85.822	ENSGACG00000016772	NCBP1	98	85.822	Gasterosteus_aculeatus
ENSPKIG00000015861	NCBP1	100	82.390	ENSGAGG00000019483	NCBP1	100	82.390	Gopherus_agassizii
ENSPKIG00000015861	NCBP1	100	81.006	ENSGGOG00000001376	NCBP1	100	81.132	Gorilla_gorilla
ENSPKIG00000015861	NCBP1	99	87.909	ENSHBUG00000020843	NCBP1	99	87.909	Haplochromis_burtoni
ENSPKIG00000015861	NCBP1	100	70.625	ENSHGLG00000018112	-	100	70.891	Heterocephalus_glaber_female
ENSPKIG00000015861	NCBP1	100	81.132	ENSHGLG00000001882	NCBP1	100	81.258	Heterocephalus_glaber_female
ENSPKIG00000015861	NCBP1	100	70.375	ENSHGLG00100017373	-	100	70.640	Heterocephalus_glaber_male
ENSPKIG00000015861	NCBP1	100	81.132	ENSHGLG00100013014	NCBP1	100	81.258	Heterocephalus_glaber_male
ENSPKIG00000015861	NCBP1	78	80.405	ENSHCOG00000000204	NCBP1	87	80.405	Hippocampus_comes
ENSPKIG00000015861	NCBP1	99	88.679	ENSIPUG00000007275	ncbp1	99	88.679	Ictalurus_punctatus
ENSPKIG00000015861	NCBP1	100	80.881	ENSSTOG00000002695	NCBP1	100	81.006	Ictidomys_tridecemlineatus
ENSPKIG00000015861	NCBP1	99	87.154	ENSKMAG00000003594	NCBP1	99	89.431	Kryptolebias_marmoratus
ENSPKIG00000015861	NCBP1	99	86.211	ENSLBEG00000011661	NCBP1	99	86.211	Labrus_bergylta
ENSPKIG00000015861	NCBP1	100	76.617	ENSLACG00000013955	NCBP1	100	76.398	Latimeria_chalumnae
ENSPKIG00000015861	NCBP1	99	75.841	ENSLOCG00000009579	NCBP1	99	75.716	Lepisosteus_oculatus
ENSPKIG00000015861	NCBP1	100	80.755	ENSLAFG00000005999	NCBP1	100	80.881	Loxodonta_africana
ENSPKIG00000015861	NCBP1	100	81.006	ENSMFAG00000030994	NCBP1	100	81.132	Macaca_fascicularis
ENSPKIG00000015861	NCBP1	99	81.060	ENSMMUG00000012281	NCBP1	99	80.995	Macaca_mulatta
ENSPKIG00000015861	NCBP1	100	81.006	ENSMNEG00000042790	NCBP1	100	81.132	Macaca_nemestrina
ENSPKIG00000015861	NCBP1	100	81.006	ENSMLEG00000030374	NCBP1	100	81.132	Mandrillus_leucophaeus
ENSPKIG00000015861	NCBP1	99	86.524	ENSMAMG00000014806	NCBP1	99	86.524	Mastacembelus_armatus
ENSPKIG00000015861	NCBP1	99	87.909	ENSMZEG00005003469	NCBP1	99	87.909	Maylandia_zebra
ENSPKIG00000015861	NCBP1	99	85.392	ENSMZEG00005009290	-	99	85.881	Maylandia_zebra
ENSPKIG00000015861	NCBP1	99	80.530	ENSMAUG00000020583	Ncbp1	99	80.025	Mesocricetus_auratus
ENSPKIG00000015861	NCBP1	100	80.629	ENSMICG00000012682	NCBP1	100	80.755	Microcebus_murinus
ENSPKIG00000015861	NCBP1	100	80.629	ENSMOCG00000015818	Ncbp1	100	80.755	Microtus_ochrogaster
ENSPKIG00000015861	NCBP1	94	84.444	ENSMMOG00000002610	NCBP1	99	84.444	Mola_mola
ENSPKIG00000015861	NCBP1	100	79.874	ENSMODG00000003202	NCBP1	99	80.126	Monodelphis_domestica
ENSPKIG00000015861	NCBP1	99	87.531	ENSMALG00000003547	NCBP1	99	87.531	Monopterus_albus
ENSPKIG00000015861	NCBP1	100	80.629	MGP_CAROLIEiJ_G0025982	Ncbp1	100	80.755	Mus_caroli
ENSPKIG00000015861	NCBP1	100	80.629	ENSMUSG00000028330	Ncbp1	100	80.755	Mus_musculus
ENSPKIG00000015861	NCBP1	100	80.629	MGP_PahariEiJ_G0028318	Ncbp1	100	80.755	Mus_pahari
ENSPKIG00000015861	NCBP1	100	80.629	MGP_SPRETEiJ_G0026945	Ncbp1	100	80.755	Mus_spretus
ENSPKIG00000015861	NCBP1	100	81.258	ENSMPUG00000006399	NCBP1	100	81.384	Mustela_putorius_furo
ENSPKIG00000015861	NCBP1	99	80.397	ENSMLUG00000015201	NCBP1	100	80.230	Myotis_lucifugus
ENSPKIG00000015861	NCBP1	100	80.881	ENSNGAG00000014101	Ncbp1	100	80.881	Nannospalax_galili
ENSPKIG00000015861	NCBP1	74	91.189	ENSNBRG00000014674	NCBP1	94	91.189	Neolamprologus_brichardi
ENSPKIG00000015861	NCBP1	100	81.006	ENSNLEG00000016909	NCBP1	100	81.132	Nomascus_leucogenys
ENSPKIG00000015861	NCBP1	89	79.867	ENSMEUG00000010672	NCBP1	90	79.749	Notamacropus_eugenii
ENSPKIG00000015861	NCBP1	82	85.294	ENSOPRG00000002144	-	83	85.294	Ochotona_princeps
ENSPKIG00000015861	NCBP1	100	81.006	ENSODEG00000003232	NCBP1	100	81.132	Octodon_degus
ENSPKIG00000015861	NCBP1	99	87.909	ENSONIG00000001502	NCBP1	99	87.909	Oreochromis_niloticus
ENSPKIG00000015861	NCBP1	78	84.591	ENSOANG00000001918	NCBP1	100	84.591	Ornithorhynchus_anatinus
ENSPKIG00000015861	NCBP1	98	80.513	ENSOCUG00000013853	NCBP1	97	80.641	Oryctolagus_cuniculus
ENSPKIG00000015861	NCBP1	99	87.218	ENSORLG00000011008	NCBP1	99	87.218	Oryzias_latipes
ENSPKIG00000015861	NCBP1	99	87.093	ENSORLG00020017455	NCBP1	99	87.093	Oryzias_latipes_hni
ENSPKIG00000015861	NCBP1	99	87.218	ENSORLG00015012127	NCBP1	99	87.218	Oryzias_latipes_hsok
ENSPKIG00000015861	NCBP1	99	87.343	ENSOMEG00000020698	NCBP1	99	87.343	Oryzias_melastigma
ENSPKIG00000015861	NCBP1	100	80.803	ENSOGAG00000013888	NCBP1	100	80.928	Otolemur_garnettii
ENSPKIG00000015861	NCBP1	100	81.258	ENSOARG00000011233	NCBP1	100	81.384	Ovis_aries
ENSPKIG00000015861	NCBP1	100	81.006	ENSPPAG00000026462	NCBP1	100	81.132	Pan_paniscus
ENSPKIG00000015861	NCBP1	100	81.132	ENSPPRG00000022574	NCBP1	100	81.258	Panthera_pardus
ENSPKIG00000015861	NCBP1	100	81.132	ENSPTIG00000018507	NCBP1	100	81.258	Panthera_tigris_altaica
ENSPKIG00000015861	NCBP1	100	81.006	ENSPTRG00000021167	NCBP1	100	81.132	Pan_troglodytes
ENSPKIG00000015861	NCBP1	100	81.006	ENSPANG00000025591	NCBP1	100	81.132	Papio_anubis
ENSPKIG00000015861	NCBP1	67	80.078	ENSPSIG00000009558	NCBP1	100	80.078	Pelodiscus_sinensis
ENSPKIG00000015861	NCBP1	99	82.058	ENSPMGG00000020476	NCBP1	99	82.058	Periophthalmus_magnuspinnatus
ENSPKIG00000015861	NCBP1	100	80.126	ENSPEMG00000020105	Ncbp1	100	80.252	Peromyscus_maniculatus_bairdii
ENSPKIG00000015861	NCBP1	87	80.000	ENSPMAG00000005533	NCBP1	100	66.584	Petromyzon_marinus
ENSPKIG00000015861	NCBP1	100	79.874	ENSPCIG00000015800	NCBP1	99	81.938	Phascolarctos_cinereus
ENSPKIG00000015861	NCBP1	99	87.343	ENSPFOG00000004158	NCBP1	99	87.469	Poecilia_formosa
ENSPKIG00000015861	NCBP1	99	87.547	ENSPLAG00000020002	NCBP1	99	87.673	Poecilia_latipinna
ENSPKIG00000015861	NCBP1	99	87.673	ENSPMEG00000019821	NCBP1	99	87.799	Poecilia_mexicana
ENSPKIG00000015861	NCBP1	99	87.437	ENSPREG00000006035	NCBP1	99	87.563	Poecilia_reticulata
ENSPKIG00000015861	NCBP1	100	81.006	ENSPPYG00000019426	NCBP1	100	81.132	Pongo_abelii
ENSPKIG00000015861	NCBP1	88	87.931	ENSPCAG00000009943	NCBP1	85	87.931	Procavia_capensis
ENSPKIG00000015861	NCBP1	85	85.526	ENSPCOG00000020024	NCBP1	98	85.526	Propithecus_coquereli
ENSPKIG00000015861	NCBP1	100	80.755	ENSPVAG00000005924	NCBP1	100	80.881	Pteropus_vampyrus
ENSPKIG00000015861	NCBP1	94	86.509	ENSPNYG00000002140	NCBP1	99	86.509	Pundamilia_nyererei
ENSPKIG00000015861	NCBP1	99	88.693	ENSPNAG00000027753	NCBP1	99	88.693	Pygocentrus_nattereri
ENSPKIG00000015861	NCBP1	100	80.629	ENSRNOG00000023605	Ncbp1	100	80.755	Rattus_norvegicus
ENSPKIG00000015861	NCBP1	100	81.006	ENSRBIG00000043175	NCBP1	100	81.132	Rhinopithecus_bieti
ENSPKIG00000015861	NCBP1	100	81.006	ENSRROG00000029767	NCBP1	100	81.132	Rhinopithecus_roxellana
ENSPKIG00000015861	NCBP1	100	81.006	ENSSBOG00000019378	NCBP1	98	86.585	Saimiri_boliviensis_boliviensis
ENSPKIG00000015861	NCBP1	70	76.046	ENSSHAG00000015882	NCBP1	72	74.708	Sarcophilus_harrisii
ENSPKIG00000015861	NCBP1	99	88.903	ENSSFOG00015001872	NCBP1	100	87.154	Scleropages_formosus
ENSPKIG00000015861	NCBP1	99	86.902	ENSSMAG00000007463	NCBP1	99	86.902	Scophthalmus_maximus
ENSPKIG00000015861	NCBP1	99	86.524	ENSSDUG00000007019	NCBP1	100	87.517	Seriola_dumerili
ENSPKIG00000015861	NCBP1	99	86.902	ENSSLDG00000021924	NCBP1	99	86.902	Seriola_lalandi_dorsalis
ENSPKIG00000015861	NCBP1	85	69.330	ENSSARG00000007274	NCBP1	87	69.546	Sorex_araneus
ENSPKIG00000015861	NCBP1	100	74.591	ENSSPUG00000008609	NCBP1	100	74.843	Sphenodon_punctatus
ENSPKIG00000015861	NCBP1	99	87.783	ENSSPAG00000012550	NCBP1	99	87.783	Stegastes_partitus
ENSPKIG00000015861	NCBP1	100	81.132	ENSSSCG00000005366	NCBP1	100	81.258	Sus_scrofa
ENSPKIG00000015861	NCBP1	100	77.358	ENSTGUG00000001472	NCBP1	100	77.358	Taeniopygia_guttata
ENSPKIG00000015861	NCBP1	99	86.272	ENSTRUG00000005287	NCBP1	99	86.272	Takifugu_rubripes
ENSPKIG00000015861	NCBP1	100	78.742	ENSTBEG00000004035	NCBP1	100	78.868	Tupaia_belangeri
ENSPKIG00000015861	NCBP1	88	82.266	ENSTTRG00000000507	NCBP1	88	82.266	Tursiops_truncatus
ENSPKIG00000015861	NCBP1	100	81.006	ENSUAMG00000005471	NCBP1	100	81.132	Ursus_americanus
ENSPKIG00000015861	NCBP1	99	79.178	ENSUMAG00000011865	NCBP1	100	80.523	Ursus_maritimus
ENSPKIG00000015861	NCBP1	100	77.358	ENSVPAG00000010537	NCBP1	100	77.484	Vicugna_pacos
ENSPKIG00000015861	NCBP1	100	81.132	ENSVVUG00000019725	NCBP1	100	81.258	Vulpes_vulpes
ENSPKIG00000015861	NCBP1	100	78.365	ENSXETG00000010179	ncbp1	100	77.736	Xenopus_tropicalis
ENSPKIG00000015861	NCBP1	99	87.547	ENSXMAG00000018253	NCBP1	99	87.673	Xiphophorus_maculatus