EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPKIG00000015883 (Gene tree)
Gene ID: 111858512
Gene Symbol: cth1
Alias: -
Full Name: mRNA decay activator protein ZFP36L2-like
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Plus strand
Length: 2591 bases
Position: chrPGUA01000354.1:264443-267033
Accession: 111858512
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000037856	zf-CCCH	PF00642.24	1.2e-30	1	4
ENSPKIP00000037856	zf-CCCH	PF00642.24	1.2e-30	2	4
ENSPKIP00000037856	zf-CCCH	PF00642.24	1.2e-30	3	4
ENSPKIP00000037856	zf-CCCH	PF00642.24	1.2e-30	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000018837	-	2230	-	ENSPKIP00000037856	319 (aa)	XP_023696125	UPI000CD5FF02

Gene Model

Click here to download ENSPKIG00000015883's gene model file

Pathways

Pathway ID	Pathway Name	Source
pki04114	Oocyte meiosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000015883's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000015883	cth1	87	51.351	ENSAPOG00000012552	cth1	99	51.125	Acanthochromis_polyacanthus
ENSPKIG00000015883	cth1	85	54.296	ENSACIG00000016026	cth1	84	53.559	Amphilophus_citrinellus
ENSPKIG00000015883	cth1	88	50.495	ENSAOCG00000001644	cth1	97	51.840	Amphiprion_ocellaris
ENSPKIG00000015883	cth1	88	50.495	ENSAPEG00000008930	cth1	97	51.840	Amphiprion_percula
ENSPKIG00000015883	cth1	88	50.809	ENSATEG00000002281	cth1	94	53.614	Anabas_testudineus
ENSPKIG00000015883	cth1	70	56.303	ENSACLG00000015353	cth1	99	50.804	Astatotilapia_calliptera
ENSPKIG00000015883	cth1	94	61.022	ENSAMXG00000025717	cth1	96	61.661	Astyanax_mexicanus
ENSPKIG00000015883	cth1	88	47.896	ENSCSEG00000014617	cth1	97	49.852	Cynoglossus_semilaevis
ENSPKIG00000015883	cth1	65	56.818	ENSCVAG00000001680	cth1	62	51.299	Cyprinodon_variegatus
ENSPKIG00000015883	cth1	89	59.661	ENSDARG00000057328	cth1	94	61.093	Danio_rerio
ENSPKIG00000015883	cth1	94	57.362	ENSELUG00000012738	cth1	93	57.975	Esox_lucius
ENSPKIG00000015883	cth1	88	44.984	ENSFHEG00000022665	cth1	96	46.440	Fundulus_heteroclitus
ENSPKIG00000015883	cth1	89	50.331	ENSGMOG00000007360	cth1	98	49.697	Gadus_morhua
ENSPKIG00000015883	cth1	94	48.447	ENSGAFG00000019288	cth1	96	49.383	Gambusia_affinis
ENSPKIG00000015883	cth1	95	50.000	ENSGACG00000000802	cth1	97	50.000	Gasterosteus_aculeatus
ENSPKIG00000015883	cth1	95	50.938	ENSHBUG00000014400	cth1	97	51.562	Haplochromis_burtoni
ENSPKIG00000015883	cth1	95	47.883	ENSHCOG00000010276	cth1	96	47.883	Hippocampus_comes
ENSPKIG00000015883	cth1	95	62.300	ENSIPUG00000018040	cth1	95	63.259	Ictalurus_punctatus
ENSPKIG00000015883	cth1	64	57.848	ENSKMAG00000005944	cth1	95	50.774	Kryptolebias_marmoratus
ENSPKIG00000015883	cth1	64	58.667	ENSLBEG00000019253	cth1	97	54.154	Labrus_bergylta
ENSPKIG00000015883	cth1	61	60.500	ENSLOCG00000002047	cth1	98	61.000	Lepisosteus_oculatus
ENSPKIG00000015883	cth1	95	42.582	ENSMAMG00000001525	cth1	61	52.766	Mastacembelus_armatus
ENSPKIG00000015883	cth1	95	50.314	ENSMZEG00005022335	cth1	97	50.943	Maylandia_zebra
ENSPKIG00000015883	cth1	88	49.498	ENSMMOG00000020518	cth1	97	50.311	Mola_mola
ENSPKIG00000015883	cth1	67	53.913	ENSMALG00000020738	cth1	61	54.783	Monopterus_albus
ENSPKIG00000015883	cth1	92	50.000	ENSNBRG00000022789	cth1	90	52.448	Neolamprologus_brichardi
ENSPKIG00000015883	cth1	95	49.691	ENSONIG00000021318	cth1	97	50.617	Oreochromis_niloticus
ENSPKIG00000015883	cth1	86	50.865	ENSORLG00000022847	cth1	86	51.557	Oryzias_latipes
ENSPKIG00000015883	cth1	86	50.865	ENSORLG00020011979	cth1	86	51.557	Oryzias_latipes_hni
ENSPKIG00000015883	cth1	86	50.173	ENSORLG00015013084	cth1	86	51.557	Oryzias_latipes_hsok
ENSPKIG00000015883	cth1	86	51.049	ENSOMEG00000005809	cth1	75	52.098	Oryzias_melastigma
ENSPKIG00000015883	cth1	66	53.814	ENSPMGG00000004275	cth1	94	51.829	Periophthalmus_magnuspinnatus
ENSPKIG00000015883	cth1	95	49.045	ENSPFOG00000013583	cth1	91	50.473	Poecilia_formosa
ENSPKIG00000015883	cth1	95	49.045	ENSPLAG00000018158	cth1	91	50.473	Poecilia_latipinna
ENSPKIG00000015883	cth1	95	49.682	ENSPMEG00000005744	cth1	97	50.000	Poecilia_mexicana
ENSPKIG00000015883	cth1	96	51.118	ENSPREG00000004099	cth1	92	50.321	Poecilia_reticulata
ENSPKIG00000015883	cth1	89	50.694	ENSPNYG00000016705	cth1	94	51.389	Pundamilia_nyererei
ENSPKIG00000015883	cth1	94	61.218	ENSPNAG00000013147	cth1	94	60.897	Pygocentrus_nattereri
ENSPKIG00000015883	cth1	93	63.961	ENSSFOG00015017190	cth1	95	61.688	Scleropages_formosus
ENSPKIG00000015883	cth1	88	51.274	ENSSDUG00000004321	cth1	97	53.012	Seriola_dumerili
ENSPKIG00000015883	cth1	78	54.579	ENSSLDG00000010023	-	97	52.553	Seriola_lalandi_dorsalis
ENSPKIG00000015883	cth1	78	54.579	ENSSLDG00000004516	-	97	52.553	Seriola_lalandi_dorsalis
ENSPKIG00000015883	cth1	88	50.955	ENSSLDG00000012760	cth1	97	52.853	Seriola_lalandi_dorsalis
ENSPKIG00000015883	cth1	88	49.013	ENSSPAG00000018659	cth1	96	51.242	Stegastes_partitus
ENSPKIG00000015883	cth1	94	45.963	ENSTRUG00000012770	cth1	96	48.438	Takifugu_rubripes
ENSPKIG00000015883	cth1	95	45.706	ENSTNIG00000000740	cth1	96	46.440	Tetraodon_nigroviridis
ENSPKIG00000015883	cth1	87	48.239	ENSXCOG00000003710	cth1	98	47.719	Xiphophorus_couchianus
ENSPKIG00000015883	cth1	95	49.074	ENSXMAG00000023885	cth1	97	49.074	Xiphophorus_maculatus