EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000015885 (Gene tree)
Gene ID: 111832917
Gene Symbol: SMARCA5 (1 of many)
Alias: -
Full Name: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Plus strand
Length: 9237 bases
Position: chrPGUA01000113.1:1518047-1527283
Accession: 111832917
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000038011	ResIII	PF04851.15	1.9e-11	1	1
ENSPKIP00000037865	ResIII	PF04851.15	2.2e-11	1	1
ENSPKIP00000038050	ResIII	PF04851.15	2.3e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000019000	SMARCA5 (1 of many)-202	3505	-	ENSPKIP00000038011	968 (aa)	-	-
ENSPKIT00000019039	SMARCA5 (1 of many)-203	2880	-	ENSPKIP00000038050	959 (aa)	-	-
ENSPKIT00000018846	SMARCA5 (1 of many)-201	3384	XM_023790701	ENSPKIP00000037865	1024 (aa)	XP_023646469	UPI000CD5E103

Gene Model

Click here to download ENSPKIG00000015885's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000015885's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000015885	SMARCA5	56	42.910	ENSPKIG00000022166	chd1l	63	42.831
ENSPKIG00000015885	SMARCA5	100	94.014	ENSPKIG00000015699	SMARCA5	98	92.781
ENSPKIG00000015885	SMARCA5	52	45.418	ENSPKIG00000010890	hells	75	39.763
ENSPKIG00000015885	SMARCA5	98	84.543	ENSPKIG00000013411	smarca1	96	84.543

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000015885	SMARCA5	100	91.237	ENSG00000153147	SMARCA5	93	91.002	Homo_sapiens
ENSPKIG00000015885	SMARCA5	100	91.340	ENSAMEG00000009585	SMARCA5	95	89.500	Ailuropoda_melanoleuca
ENSPKIG00000015885	SMARCA5	98	91.051	ENSAPLG00000009206	SMARCA5	99	91.051	Anas_platyrhynchos
ENSPKIG00000015885	SMARCA5	99	91.847	ENSACAG00000003038	SMARCA5	94	91.847	Anolis_carolinensis
ENSPKIG00000015885	SMARCA5	100	91.340	ENSANAG00000019345	SMARCA5	98	91.104	Aotus_nancymaae
ENSPKIG00000015885	SMARCA5	100	91.340	ENSBTAG00000003399	SMARCA5	95	89.500	Bos_taurus
ENSPKIG00000015885	SMARCA5	100	91.340	ENSCJAG00000002735	SMARCA5	93	91.104	Callithrix_jacchus
ENSPKIG00000015885	SMARCA5	100	91.340	ENSCAFG00000007525	SMARCA5	95	89.500	Canis_familiaris
ENSPKIG00000015885	SMARCA5	98	91.684	ENSCAFG00020025641	SMARCA5	94	89.980	Canis_lupus_dingo
ENSPKIG00000015885	SMARCA5	100	89.691	ENSCHIG00000016375	-	95	89.468	Capra_hircus
ENSPKIG00000015885	SMARCA5	100	91.340	ENSCHIG00000013730	-	95	89.500	Capra_hircus
ENSPKIG00000015885	SMARCA5	100	91.443	ENSTSYG00000009954	SMARCA5	98	91.207	Carlito_syrichta
ENSPKIG00000015885	SMARCA5	99	90.815	ENSCAPG00000013747	SMARCA5	95	90.815	Cavia_aperea
ENSPKIG00000015885	SMARCA5	100	91.134	ENSCPOG00000002259	SMARCA5	97	87.622	Cavia_porcellus
ENSPKIG00000015885	SMARCA5	100	91.340	ENSCCAG00000027215	SMARCA5	98	91.104	Cebus_capucinus
ENSPKIG00000015885	SMARCA5	100	91.237	ENSCATG00000044917	SMARCA5	93	91.002	Cercocebus_atys
ENSPKIG00000015885	SMARCA5	100	91.237	ENSCLAG00000006153	SMARCA5	98	91.237	Chinchilla_lanigera
ENSPKIG00000015885	SMARCA5	100	91.237	ENSCSAG00000003448	SMARCA5	100	91.237	Chlorocebus_sabaeus
ENSPKIG00000015885	SMARCA5	91	90.557	ENSCHOG00000011724	SMARCA5	83	90.557	Choloepus_hoffmanni
ENSPKIG00000015885	SMARCA5	100	91.649	ENSCPBG00000027535	SMARCA5	96	89.721	Chrysemys_picta_bellii
ENSPKIG00000015885	SMARCA5	100	91.237	ENSCANG00000041629	SMARCA5	93	91.002	Colobus_angolensis_palliatus
ENSPKIG00000015885	SMARCA5	100	91.134	ENSCGRG00001012719	Smarca5	97	87.464	Cricetulus_griseus_chok1gshd
ENSPKIG00000015885	SMARCA5	100	91.134	ENSCGRG00000001417	Smarca5	97	90.900	Cricetulus_griseus_crigri
ENSPKIG00000015885	SMARCA5	100	88.969	ENSDNOG00000009158	SMARCA5	97	85.492	Dasypus_novemcinctus
ENSPKIG00000015885	SMARCA5	98	83.878	ENSDORG00000003466	Smarca5	97	83.878	Dipodomys_ordii
ENSPKIG00000015885	SMARCA5	99	84.298	ENSEBUG00000014773	SMARCA5	97	83.967	Eptatretus_burgeri
ENSPKIG00000015885	SMARCA5	100	91.340	ENSEASG00005001866	SMARCA5	98	91.646	Equus_asinus_asinus
ENSPKIG00000015885	SMARCA5	100	91.340	ENSECAG00000002676	SMARCA5	95	89.500	Equus_caballus
ENSPKIG00000015885	SMARCA5	100	87.732	ENSEEUG00000013176	SMARCA5	98	87.732	Erinaceus_europaeus
ENSPKIG00000015885	SMARCA5	99	92.673	ENSELUG00000014653	SMARCA5	99	92.673	Esox_lucius
ENSPKIG00000015885	SMARCA5	100	91.340	ENSFCAG00000004544	SMARCA5	95	89.500	Felis_catus
ENSPKIG00000015885	SMARCA5	100	91.649	ENSFALG00000004987	SMARCA5	100	91.649	Ficedula_albicollis
ENSPKIG00000015885	SMARCA5	100	91.340	ENSFDAG00000021016	SMARCA5	98	91.340	Fukomys_damarensis
ENSPKIG00000015885	SMARCA5	99	92.045	ENSGMOG00000007519	SMARCA5	98	88.867	Gadus_morhua
ENSPKIG00000015885	SMARCA5	100	92.062	ENSGALG00000009913	SMARCA5	96	90.281	Gallus_gallus
ENSPKIG00000015885	SMARCA5	99	92.252	ENSGACG00000017238	SMARCA5	99	89.052	Gasterosteus_aculeatus
ENSPKIG00000015885	SMARCA5	100	91.546	ENSGAGG00000019882	SMARCA5	96	89.621	Gopherus_agassizii
ENSPKIG00000015885	SMARCA5	100	91.237	ENSGGOG00000012595	SMARCA5	98	91.002	Gorilla_gorilla
ENSPKIG00000015885	SMARCA5	100	82.784	ENSHGLG00000000317	-	93	82.515	Heterocephalus_glaber_female
ENSPKIG00000015885	SMARCA5	100	91.237	ENSHGLG00000000816	-	93	91.002	Heterocephalus_glaber_female
ENSPKIG00000015885	SMARCA5	100	91.237	ENSHGLG00100018421	-	98	91.237	Heterocephalus_glaber_male
ENSPKIG00000015885	SMARCA5	100	91.340	ENSSTOG00000010683	SMARCA5	93	91.104	Ictidomys_tridecemlineatus
ENSPKIG00000015885	SMARCA5	100	91.237	ENSJJAG00000014965	Smarca5	98	87.366	Jaculus_jaculus
ENSPKIG00000015885	SMARCA5	100	91.134	ENSLACG00000007091	SMARCA5	99	88.299	Latimeria_chalumnae
ENSPKIG00000015885	SMARCA5	100	94.124	ENSLOCG00000008966	SMARCA5	100	91.342	Lepisosteus_oculatus
ENSPKIG00000015885	SMARCA5	100	91.340	ENSLAFG00000007795	SMARCA5	93	91.104	Loxodonta_africana
ENSPKIG00000015885	SMARCA5	100	91.237	ENSMFAG00000043649	SMARCA5	93	91.002	Macaca_fascicularis
ENSPKIG00000015885	SMARCA5	100	91.237	ENSMMUG00000000829	SMARCA5	97	91.570	Macaca_mulatta
ENSPKIG00000015885	SMARCA5	100	91.237	ENSMNEG00000031916	SMARCA5	93	91.002	Macaca_nemestrina
ENSPKIG00000015885	SMARCA5	100	91.237	ENSMLEG00000042393	SMARCA5	93	91.002	Mandrillus_leucophaeus
ENSPKIG00000015885	SMARCA5	100	92.062	ENSMGAG00000003517	SMARCA5	99	90.030	Meleagris_gallopavo
ENSPKIG00000015885	SMARCA5	100	91.134	ENSMAUG00000015902	Smarca5	96	90.900	Mesocricetus_auratus
ENSPKIG00000015885	SMARCA5	100	91.443	ENSMICG00000003971	SMARCA5	98	90.276	Microcebus_murinus
ENSPKIG00000015885	SMARCA5	100	90.928	ENSMOCG00000016986	-	93	90.695	Microtus_ochrogaster
ENSPKIG00000015885	SMARCA5	100	91.649	ENSMODG00000000391	SMARCA5	95	89.621	Monodelphis_domestica
ENSPKIG00000015885	SMARCA5	100	91.031	ENSMUSG00000031715	Smarca5	95	89.200	Mus_musculus
ENSPKIG00000015885	SMARCA5	100	91.134	MGP_PahariEiJ_G0022862	Smarca5	95	89.300	Mus_pahari
ENSPKIG00000015885	SMARCA5	100	91.340	ENSMLUG00000000468	SMARCA5	95	89.500	Myotis_lucifugus
ENSPKIG00000015885	SMARCA5	100	91.134	ENSNGAG00000000441	Smarca5	95	89.066	Nannospalax_galili
ENSPKIG00000015885	SMARCA5	100	91.237	ENSNLEG00000005383	SMARCA5	93	91.002	Nomascus_leucogenys
ENSPKIG00000015885	SMARCA5	99	84.830	ENSMEUG00000001267	SMARCA5	100	84.830	Notamacropus_eugenii
ENSPKIG00000015885	SMARCA5	90	95.812	ENSOPRG00000014427	SMARCA5	86	95.812	Ochotona_princeps
ENSPKIG00000015885	SMARCA5	100	91.649	ENSOANG00000013921	SMARCA5	100	91.649	Ornithorhynchus_anatinus
ENSPKIG00000015885	SMARCA5	100	91.237	ENSOCUG00000013042	SMARCA5	100	91.237	Oryctolagus_cuniculus
ENSPKIG00000015885	SMARCA5	100	91.443	ENSOGAG00000009702	SMARCA5	95	89.500	Otolemur_garnettii
ENSPKIG00000015885	SMARCA5	99	91.228	ENSOARG00000010589	SMARCA5	94	89.389	Ovis_aries
ENSPKIG00000015885	SMARCA5	100	91.340	ENSPPAG00000028523	SMARCA5	98	91.104	Pan_paniscus
ENSPKIG00000015885	SMARCA5	100	86.186	ENSPPRG00000004925	SMARCA5	95	85.100	Panthera_pardus
ENSPKIG00000015885	SMARCA5	100	91.340	ENSPTIG00000020959	SMARCA5	96	89.500	Panthera_tigris_altaica
ENSPKIG00000015885	SMARCA5	100	91.237	ENSPTRG00000016472	SMARCA5	98	91.002	Pan_troglodytes
ENSPKIG00000015885	SMARCA5	100	91.237	ENSPANG00000001175	SMARCA5	93	91.002	Papio_anubis
ENSPKIG00000015885	SMARCA5	100	89.691	ENSPSIG00000004177	SMARCA5	100	87.988	Pelodiscus_sinensis
ENSPKIG00000015885	SMARCA5	99	91.658	ENSPMGG00000012316	SMARCA5	100	91.658	Periophthalmus_magnuspinnatus
ENSPKIG00000015885	SMARCA5	100	91.134	ENSPEMG00000008060	Smarca5	96	90.900	Peromyscus_maniculatus_bairdii
ENSPKIG00000015885	SMARCA5	100	70.842	ENSPMAG00000006011	SMARCA5	76	90.345	Petromyzon_marinus
ENSPKIG00000015885	SMARCA5	65	84.102	ENSPMAG00000008026	SMARCA5	100	82.998	Petromyzon_marinus
ENSPKIG00000015885	SMARCA5	100	91.649	ENSPCIG00000003926	SMARCA5	95	89.621	Phascolarctos_cinereus
ENSPKIG00000015885	SMARCA5	100	91.237	ENSPPYG00000015091	SMARCA5	93	91.002	Pongo_abelii
ENSPKIG00000015885	SMARCA5	86	87.333	ENSPCAG00000014230	SMARCA5	83	87.333	Procavia_capensis
ENSPKIG00000015885	SMARCA5	100	88.958	ENSPCOG00000026744	SMARCA5	98	88.458	Propithecus_coquereli
ENSPKIG00000015885	SMARCA5	100	91.237	ENSPVAG00000006482	SMARCA5	95	89.400	Pteropus_vampyrus
ENSPKIG00000015885	SMARCA5	100	93.705	ENSPNAG00000027824	SMARCA5	98	92.033	Pygocentrus_nattereri
ENSPKIG00000015885	SMARCA5	100	91.031	ENSRNOG00000018149	Smarca5	100	89.379	Rattus_norvegicus
ENSPKIG00000015885	SMARCA5	100	91.237	ENSRBIG00000044644	SMARCA5	93	91.002	Rhinopithecus_bieti
ENSPKIG00000015885	SMARCA5	100	91.237	ENSRROG00000029591	SMARCA5	98	91.002	Rhinopithecus_roxellana
ENSPKIG00000015885	SMARCA5	100	91.340	ENSSBOG00000036257	SMARCA5	93	91.104	Saimiri_boliviensis_boliviensis
ENSPKIG00000015885	SMARCA5	100	91.649	ENSSHAG00000008464	SMARCA5	98	91.649	Sarcophilus_harrisii
ENSPKIG00000015885	SMARCA5	100	95.459	ENSSFOG00015013252	SMARCA5	100	93.093	Scleropages_formosus
ENSPKIG00000015885	SMARCA5	100	90.000	ENSSPUG00000007604	SMARCA5	97	91.560	Sphenodon_punctatus
ENSPKIG00000015885	SMARCA5	100	91.340	ENSSSCG00000009047	SMARCA5	95	89.500	Sus_scrofa
ENSPKIG00000015885	SMARCA5	100	91.546	ENSTGUG00000002408	SMARCA5	97	91.393	Taeniopygia_guttata
ENSPKIG00000015885	SMARCA5	99	91.318	ENSUAMG00000023495	SMARCA5	92	91.079	Ursus_americanus
ENSPKIG00000015885	SMARCA5	100	91.340	ENSUMAG00000015324	SMARCA5	97	89.500	Ursus_maritimus
ENSPKIG00000015885	SMARCA5	100	91.134	ENSVPAG00000008982	SMARCA5	95	89.300	Vicugna_pacos
ENSPKIG00000015885	SMARCA5	100	91.340	ENSVVUG00000017473	SMARCA5	95	89.500	Vulpes_vulpes
ENSPKIG00000015885	SMARCA5	94	89.749	ENSXETG00000017566	smarca5	93	89.502	Xenopus_tropicalis