EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000015926 (Gene tree)
Gene ID: 111846187
Gene Symbol: -
Alias: -
Full Name: RNA-binding Raly-like protein
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Minus strand
Length: 56578 bases
Position: chrPGUA01000154.1:740445-797022
Accession: 111846187
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000037942	RRM_1	PF00076.22	4.2e-10	1	1
ENSPKIP00000037927	RRM_1	PF00076.22	6.1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000018928	-	3988	-	ENSPKIP00000037942	289 (aa)	XP_023671909	UPI000CD64204
ENSPKIT00000018913	-	6012	-	ENSPKIP00000037927	349 (aa)	-	-

Gene Model

Click here to download ENSPKIG00000015926's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000015926's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000015926	-	79	53.390	ENSPKIG00000022837	-	71	53.191
ENSPKIG00000015926	-	100	54.671	ENSPKIG00000004894	raly	99	53.767
ENSPKIG00000015926	-	82	53.498	ENSPKIG00000008592	-	74	52.245

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000015926	-	100	72.696	ENSAPOG00000008744	-	100	72.696	Acanthochromis_polyacanthus
ENSPKIG00000015926	-	97	66.667	ENSACIG00000007143	-	97	66.667	Amphilophus_citrinellus
ENSPKIG00000015926	-	100	73.379	ENSAOCG00000023599	-	100	73.379	Amphiprion_ocellaris
ENSPKIG00000015926	-	100	79.863	ENSAOCG00000001605	-	100	79.863	Amphiprion_ocellaris
ENSPKIG00000015926	-	99	64.570	ENSATEG00000022219	-	95	68.874	Anabas_testudineus
ENSPKIG00000015926	-	78	82.222	ENSATEG00000023356	-	88	81.579	Anabas_testudineus
ENSPKIG00000015926	-	100	78.157	ENSACLG00000006949	-	100	78.157	Astatotilapia_calliptera
ENSPKIG00000015926	-	100	73.630	ENSACLG00000011720	-	100	73.630	Astatotilapia_calliptera
ENSPKIG00000015926	-	100	78.157	ENSAMXG00000019031	-	100	78.157	Astyanax_mexicanus
ENSPKIG00000015926	-	100	61.565	ENSAMXG00000032617	-	100	61.565	Astyanax_mexicanus
ENSPKIG00000015926	-	100	67.918	ENSCSEG00000014237	-	100	67.677	Cynoglossus_semilaevis
ENSPKIG00000015926	-	100	73.038	ENSCVAG00000013624	-	100	73.038	Cyprinodon_variegatus
ENSPKIG00000015926	-	100	78.912	ENSCVAG00000018104	-	100	78.912	Cyprinodon_variegatus
ENSPKIG00000015926	-	60	76.744	ENSDARG00000090292	ralyl	83	77.844	Danio_rerio
ENSPKIG00000015926	-	93	65.942	ENSELUG00000001702	-	96	66.906	Esox_lucius
ENSPKIG00000015926	-	57	73.494	ENSGMOG00000005914	-	100	73.494	Gadus_morhua
ENSPKIG00000015926	-	60	82.184	ENSGACG00000004991	-	91	84.431	Gasterosteus_aculeatus
ENSPKIG00000015926	-	100	73.379	ENSHBUG00000010040	-	100	73.379	Haplochromis_burtoni
ENSPKIG00000015926	-	100	78.157	ENSHBUG00000015412	-	100	78.157	Haplochromis_burtoni
ENSPKIG00000015926	-	100	79.181	ENSIPUG00000000507	ralyl	100	80.678	Ictalurus_punctatus
ENSPKIG00000015926	-	100	72.014	ENSKMAG00000022093	-	100	72.014	Kryptolebias_marmoratus
ENSPKIG00000015926	-	100	78.498	ENSKMAG00000018155	-	100	79.252	Kryptolebias_marmoratus
ENSPKIG00000015926	-	100	78.840	ENSLBEG00000011011	-	100	78.840	Labrus_bergylta
ENSPKIG00000015926	-	100	72.014	ENSLBEG00000012873	-	100	72.014	Labrus_bergylta
ENSPKIG00000015926	-	100	76.451	ENSLOCG00000012787	ralyl	99	76.451	Lepisosteus_oculatus
ENSPKIG00000015926	-	97	70.567	ENSMAMG00000001723	-	95	70.922	Mastacembelus_armatus
ENSPKIG00000015926	-	98	74.658	ENSMZEG00005018748	-	99	75.000	Maylandia_zebra
ENSPKIG00000015926	-	100	73.630	ENSMZEG00005024447	-	100	73.630	Maylandia_zebra
ENSPKIG00000015926	-	97	64.983	ENSMMOG00000020441	-	86	63.973	Mola_mola
ENSPKIG00000015926	-	100	78.157	ENSMALG00000012952	-	100	78.157	Monopterus_albus
ENSPKIG00000015926	-	100	74.061	ENSMALG00000019019	-	78	74.061	Monopterus_albus
ENSPKIG00000015926	-	98	75.342	ENSNBRG00000011376	-	99	75.342	Neolamprologus_brichardi
ENSPKIG00000015926	-	97	67.014	ENSNBRG00000011206	-	97	67.014	Neolamprologus_brichardi
ENSPKIG00000015926	-	100	70.648	ENSORLG00000017934	-	100	70.307	Oryzias_latipes
ENSPKIG00000015926	-	100	79.522	ENSORLG00000012719	-	100	79.522	Oryzias_latipes
ENSPKIG00000015926	-	100	79.522	ENSORLG00020004438	-	100	79.522	Oryzias_latipes_hni
ENSPKIG00000015926	-	100	69.625	ENSORLG00020000082	-	100	69.128	Oryzias_latipes_hni
ENSPKIG00000015926	-	100	70.307	ENSORLG00015004280	-	100	69.966	Oryzias_latipes_hsok
ENSPKIG00000015926	-	100	79.522	ENSORLG00015004727	-	100	79.522	Oryzias_latipes_hsok
ENSPKIG00000015926	-	100	79.522	ENSOMEG00000001170	-	100	79.522	Oryzias_melastigma
ENSPKIG00000015926	-	100	71.044	ENSOMEG00000011821	-	100	70.648	Oryzias_melastigma
ENSPKIG00000015926	-	82	71.250	ENSPMGG00000014481	-	99	71.548	Periophthalmus_magnuspinnatus
ENSPKIG00000015926	-	97	64.384	ENSPMGG00000009532	-	97	63.194	Periophthalmus_magnuspinnatus
ENSPKIG00000015926	-	97	69.831	ENSPFOG00000006120	-	99	69.831	Poecilia_formosa
ENSPKIG00000015926	-	97	65.614	ENSPLAG00000009877	-	76	65.614	Poecilia_latipinna
ENSPKIG00000015926	-	97	78.397	ENSPLAG00000011323	ralyl	100	78.397	Poecilia_latipinna
ENSPKIG00000015926	-	97	65.614	ENSPMEG00000013624	-	79	65.614	Poecilia_mexicana
ENSPKIG00000015926	-	97	78.397	ENSPMEG00000023847	ralyl	100	78.397	Poecilia_mexicana
ENSPKIG00000015926	-	97	77.003	ENSPREG00000001956	ralyl	100	77.431	Poecilia_reticulata
ENSPKIG00000015926	-	97	72.887	ENSPREG00000013805	-	100	68.690	Poecilia_reticulata
ENSPKIG00000015926	-	97	67.014	ENSPNYG00000008772	-	97	67.014	Pundamilia_nyererei
ENSPKIG00000015926	-	98	74.658	ENSPNYG00000003548	-	99	75.000	Pundamilia_nyererei
ENSPKIG00000015926	-	100	79.181	ENSPNAG00000000498	-	88	79.181	Pygocentrus_nattereri
ENSPKIG00000015926	-	100	65.052	ENSPNAG00000026098	-	100	65.052	Pygocentrus_nattereri
ENSPKIG00000015926	-	100	69.283	ENSSFOG00015004575	-	96	74.648	Scleropages_formosus
ENSPKIG00000015926	-	100	81.356	ENSSFOG00015009401	-	100	82.034	Scleropages_formosus
ENSPKIG00000015926	-	97	70.567	ENSSMAG00000015907	-	93	70.567	Scophthalmus_maximus
ENSPKIG00000015926	-	100	77.474	ENSSMAG00000005608	-	100	77.474	Scophthalmus_maximus
ENSPKIG00000015926	-	100	73.720	ENSSDUG00000012473	-	100	73.720	Seriola_dumerili
ENSPKIG00000015926	-	100	80.205	ENSSDUG00000007587	-	100	80.205	Seriola_dumerili
ENSPKIG00000015926	-	100	79.592	ENSSLDG00000020603	-	100	79.592	Seriola_lalandi_dorsalis
ENSPKIG00000015926	-	100	73.720	ENSSLDG00000011534	-	100	73.720	Seriola_lalandi_dorsalis
ENSPKIG00000015926	-	100	60.900	ENSSPAG00000013858	-	96	60.900	Stegastes_partitus
ENSPKIG00000015926	-	83	73.333	ENSTRUG00000003829	-	95	70.000	Takifugu_rubripes
ENSPKIG00000015926	-	97	69.416	ENSTNIG00000005594	-	99	69.416	Tetraodon_nigroviridis
ENSPKIG00000015926	-	100	66.102	ENSXETG00000017729	ralyl	99	67.458	Xenopus_tropicalis
ENSPKIG00000015926	-	97	75.932	ENSXCOG00000015156	-	93	75.932	Xiphophorus_couchianus
ENSPKIG00000015926	-	100	73.720	ENSXMAG00000007614	-	100	73.720	Xiphophorus_maculatus
ENSPKIG00000015926	-	100	79.522	ENSXMAG00000008396	-	100	79.522	Xiphophorus_maculatus