EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000015967 (Gene tree)
Gene ID: 111840985
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Plus strand
Length: 24849 bases
Position: chrPGUA01000810.1:56529-81377
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000038221	Not3	PF04065.15	4.8e-96	1	1
ENSPKIP00000038174	Not3	PF04065.15	1.2e-95	1	1
ENSPKIP00000038192	Not3	PF04065.15	1.4e-95	1	1
ENSPKIP00000038221	NOT2_3_5	PF04153.18	5.7e-40	1	1
ENSPKIP00000038174	NOT2_3_5	PF04153.18	1.8e-28	1	1
ENSPKIP00000038192	NOT2_3_5	PF04153.18	2.6e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000019165	-	2559	-	ENSPKIP00000038174	852 (aa)	-	-
ENSPKIT00000019212	-	1824	-	ENSPKIP00000038221	607 (aa)	-	-
ENSPKIT00000019183	-	2676	-	ENSPKIP00000038192	891 (aa)	-	-

Gene Model

Click here to download ENSPKIG00000015967's gene model file

Pathways

Pathway ID	Pathway Name	Source
pki03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000015967's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000015967	-	100	93.227	ENSPKIG00000011733	CNOT3	71	97.863

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000015967	-	78	94.872	ENSG00000088038	CNOT3	100	95.876	Homo_sapiens
ENSPKIG00000015967	-	84	91.429	ENSAPOG00000015499	CNOT3	87	82.918	Acanthochromis_polyacanthus
ENSPKIG00000015967	-	70	97.129	ENSAPOG00000015002	cnot3b	64	97.129	Acanthochromis_polyacanthus
ENSPKIG00000015967	-	78	95.299	ENSAMEG00000004528	CNOT3	66	95.299	Ailuropoda_melanoleuca
ENSPKIG00000015967	-	87	94.894	ENSACIG00000006635	cnot3a	93	94.872	Amphilophus_citrinellus
ENSPKIG00000015967	-	99	73.885	ENSACIG00000003652	cnot3b	94	93.304	Amphilophus_citrinellus
ENSPKIG00000015967	-	95	80.383	ENSAOCG00000018385	-	100	74.836	Amphiprion_ocellaris
ENSPKIG00000015967	-	98	89.020	ENSAOCG00000023769	cnot3a	66	94.872	Amphiprion_ocellaris
ENSPKIG00000015967	-	100	89.020	ENSAPEG00000006624	cnot3a	69	94.872	Amphiprion_percula
ENSPKIG00000015967	-	89	97.143	ENSAPEG00000002640	cnot3b	92	97.143	Amphiprion_percula
ENSPKIG00000015967	-	100	89.020	ENSATEG00000022737	cnot3a	68	94.872	Anabas_testudineus
ENSPKIG00000015967	-	100	92.430	ENSATEG00000015777	cnot3b	99	67.627	Anabas_testudineus
ENSPKIG00000015967	-	82	95.299	ENSACAG00000016085	CNOT3	69	95.299	Anolis_carolinensis
ENSPKIG00000015967	-	78	94.872	ENSANAG00000025756	CNOT3	68	94.872	Aotus_nancymaae
ENSPKIG00000015967	-	90	89.020	ENSACLG00000021136	cnot3a	68	94.872	Astatotilapia_calliptera
ENSPKIG00000015967	-	99	95.726	ENSACLG00000016702	cnot3b	97	68.350	Astatotilapia_calliptera
ENSPKIG00000015967	-	100	90.837	ENSAMXG00000012359	cnot3a	68	95.726	Astyanax_mexicanus
ENSPKIG00000015967	-	98	97.321	ENSAMXG00000009447	cnot3b	93	93.464	Astyanax_mexicanus
ENSPKIG00000015967	-	82	94.872	ENSBTAG00000014900	CNOT3	64	94.872	Bos_taurus
ENSPKIG00000015967	-	77	50.761	WBGene00003826	ntl-3	98	51.546	Caenorhabditis_elegans
ENSPKIG00000015967	-	78	94.872	ENSCJAG00000001094	CNOT3	66	94.872	Callithrix_jacchus
ENSPKIG00000015967	-	78	94.872	ENSCAFG00000002699	CNOT3	66	94.872	Canis_familiaris
ENSPKIG00000015967	-	78	94.872	ENSCAFG00020018359	CNOT3	66	94.872	Canis_lupus_dingo
ENSPKIG00000015967	-	77	92.275	ENSCHIG00000015302	CNOT3	67	92.275	Capra_hircus
ENSPKIG00000015967	-	99	94.872	ENSTSYG00000008058	CNOT3	66	94.872	Carlito_syrichta
ENSPKIG00000015967	-	78	94.872	ENSCAPG00000009533	CNOT3	63	94.872	Cavia_aperea
ENSPKIG00000015967	-	78	94.872	ENSCPOG00000020741	CNOT3	85	93.359	Cavia_porcellus
ENSPKIG00000015967	-	78	94.872	ENSCCAG00000036290	CNOT3	69	94.872	Cebus_capucinus
ENSPKIG00000015967	-	78	94.872	ENSCATG00000030324	CNOT3	66	94.872	Cercocebus_atys
ENSPKIG00000015967	-	78	94.872	ENSCLAG00000003302	CNOT3	100	86.585	Chinchilla_lanigera
ENSPKIG00000015967	-	78	94.872	ENSCSAG00000001900	CNOT3	66	94.872	Chlorocebus_sabaeus
ENSPKIG00000015967	-	99	96.154	ENSCPBG00000011655	CNOT3	78	96.154	Chrysemys_picta_bellii
ENSPKIG00000015967	-	100	51.000	ENSCING00000000293	-	71	69.957	Ciona_intestinalis
ENSPKIG00000015967	-	82	94.872	ENSCANG00000013408	CNOT3	66	94.872	Colobus_angolensis_palliatus
ENSPKIG00000015967	-	78	95.299	ENSCGRG00001000855	Cnot3	63	95.299	Cricetulus_griseus_chok1gshd
ENSPKIG00000015967	-	69	70.233	ENSCGRG00000012929	Cnot3	68	70.233	Cricetulus_griseus_crigri
ENSPKIG00000015967	-	100	87.843	ENSCSEG00000003574	cnot3a	68	93.590	Cynoglossus_semilaevis
ENSPKIG00000015967	-	100	85.657	ENSCSEG00000016892	cnot3b	68	90.129	Cynoglossus_semilaevis
ENSPKIG00000015967	-	99	94.444	ENSCVAG00000008168	cnot3a	68	94.444	Cyprinodon_variegatus
ENSPKIG00000015967	-	97	95.946	ENSCVAG00000022122	cnot3b	97	64.883	Cyprinodon_variegatus
ENSPKIG00000015967	-	93	96.581	ENSDARG00000019842	cnot3b	69	96.581	Danio_rerio
ENSPKIG00000015967	-	100	90.438	ENSDARG00000007135	cnot3a	61	95.299	Danio_rerio
ENSPKIG00000015967	-	78	94.444	ENSDNOG00000045972	CNOT3	66	94.444	Dasypus_novemcinctus
ENSPKIG00000015967	-	80	94.872	ENSDORG00000008021	Cnot3	100	81.609	Dipodomys_ordii
ENSPKIG00000015967	-	74	100.000	ENSETEG00000006305	CNOT3	52	100.000	Echinops_telfairi
ENSPKIG00000015967	-	100	73.518	ENSEBUG00000010437	cnot3a	62	77.447	Eptatretus_burgeri
ENSPKIG00000015967	-	78	94.872	ENSEASG00005021591	CNOT3	66	94.872	Equus_asinus_asinus
ENSPKIG00000015967	-	78	94.872	ENSECAG00000023181	CNOT3	66	94.872	Equus_caballus
ENSPKIG00000015967	-	98	94.894	ENSELUG00000014743	cnot3a	67	94.894	Esox_lucius
ENSPKIG00000015967	-	100	90.837	ENSELUG00000000953	cnot3b	66	95.726	Esox_lucius
ENSPKIG00000015967	-	78	94.872	ENSFCAG00000014042	CNOT3	66	94.872	Felis_catus
ENSPKIG00000015967	-	99	94.872	ENSFHEG00000023166	cnot3a	96	85.556	Fundulus_heteroclitus
ENSPKIG00000015967	-	85	96.396	ENSFHEG00000001696	cnot3b	67	94.017	Fundulus_heteroclitus
ENSPKIG00000015967	-	91	80.934	ENSGMOG00000005365	cnot3a	64	86.017	Gadus_morhua
ENSPKIG00000015967	-	99	94.872	ENSGAFG00000013094	cnot3a	67	94.872	Gambusia_affinis
ENSPKIG00000015967	-	97	95.495	ENSGAFG00000003459	cnot3b	97	64.667	Gambusia_affinis
ENSPKIG00000015967	-	91	80.545	ENSGACG00000011489	cnot3a	57	85.593	Gasterosteus_aculeatus
ENSPKIG00000015967	-	99	65.406	ENSGAGG00000012677	CNOT3	79	94.043	Gopherus_agassizii
ENSPKIG00000015967	-	82	94.872	ENSGGOG00000012996	CNOT3	69	94.872	Gorilla_gorilla
ENSPKIG00000015967	-	90	89.020	ENSHBUG00000005275	cnot3a	68	94.872	Haplochromis_burtoni
ENSPKIG00000015967	-	96	90.566	ENSHBUG00000019699	cnot3b	97	62.346	Haplochromis_burtoni
ENSPKIG00000015967	-	78	94.872	ENSHGLG00000008821	CNOT3	100	81.609	Heterocephalus_glaber_female
ENSPKIG00000015967	-	78	85.385	ENSHGLG00100006181	CNOT3	100	81.609	Heterocephalus_glaber_male
ENSPKIG00000015967	-	87	94.894	ENSHCOG00000020968	cnot3a	62	94.872	Hippocampus_comes
ENSPKIG00000015967	-	99	97.009	ENSIPUG00000009046	cnot3b	70	97.009	Ictalurus_punctatus
ENSPKIG00000015967	-	99	93.590	ENSIPUG00000000167	cnot3	86	77.436	Ictalurus_punctatus
ENSPKIG00000015967	-	99	94.872	ENSSTOG00000028248	CNOT3	66	94.872	Ictidomys_tridecemlineatus
ENSPKIG00000015967	-	88	95.299	ENSJJAG00000014594	Cnot3	100	81.609	Jaculus_jaculus
ENSPKIG00000015967	-	97	96.018	ENSKMAG00000018723	cnot3b	97	68.298	Kryptolebias_marmoratus
ENSPKIG00000015967	-	100	89.020	ENSKMAG00000004863	cnot3a	74	94.872	Kryptolebias_marmoratus
ENSPKIG00000015967	-	94	96.581	ENSLBEG00000018278	cnot3b	67	96.581	Labrus_bergylta
ENSPKIG00000015967	-	78	91.284	ENSLBEG00000017296	cnot3a	62	94.017	Labrus_bergylta
ENSPKIG00000015967	-	81	95.299	ENSLACG00000009742	CNOT3	72	95.299	Latimeria_chalumnae
ENSPKIG00000015967	-	69	98.204	ENSLOCG00000000005	cnot3b	82	95.270	Lepisosteus_oculatus
ENSPKIG00000015967	-	77	94.043	ENSLAFG00000022133	CNOT3	82	92.218	Loxodonta_africana
ENSPKIG00000015967	-	78	94.872	ENSMFAG00000040073	CNOT3	66	94.872	Macaca_fascicularis
ENSPKIG00000015967	-	83	93.724	ENSMMUG00000009698	CNOT3	100	98.039	Macaca_mulatta
ENSPKIG00000015967	-	78	94.872	ENSMNEG00000036750	CNOT3	66	94.872	Macaca_nemestrina
ENSPKIG00000015967	-	78	94.872	ENSMLEG00000036579	CNOT3	65	94.872	Mandrillus_leucophaeus
ENSPKIG00000015967	-	100	89.412	ENSMAMG00000019397	cnot3a	67	95.299	Mastacembelus_armatus
ENSPKIG00000015967	-	99	96.154	ENSMAMG00000019357	cnot3b	97	67.478	Mastacembelus_armatus
ENSPKIG00000015967	-	99	95.726	ENSMZEG00005002466	cnot3b	97	68.468	Maylandia_zebra
ENSPKIG00000015967	-	90	89.020	ENSMZEG00005016304	cnot3a	68	94.872	Maylandia_zebra
ENSPKIG00000015967	-	78	95.299	ENSMAUG00000014996	Cnot3	63	95.299	Mesocricetus_auratus
ENSPKIG00000015967	-	78	94.872	ENSMICG00000002370	CNOT3	69	94.872	Microcebus_murinus
ENSPKIG00000015967	-	100	75.481	ENSMMOG00000013086	cnot3b	93	93.162	Mola_mola
ENSPKIG00000015967	-	93	89.787	ENSMMOG00000016446	cnot3a	63	89.787	Mola_mola
ENSPKIG00000015967	-	78	95.726	ENSMODG00000004066	CNOT3	67	95.726	Monodelphis_domestica
ENSPKIG00000015967	-	76	91.705	ENSMALG00000004936	cnot3b	80	91.600	Monopterus_albus
ENSPKIG00000015967	-	90	87.843	ENSMALG00000009204	cnot3a	61	93.590	Monopterus_albus
ENSPKIG00000015967	-	99	95.299	MGP_CAROLIEiJ_G0029095	Cnot3	100	97.000	Mus_caroli
ENSPKIG00000015967	-	99	95.299	ENSMUSG00000035632	Cnot3	100	97.000	Mus_musculus
ENSPKIG00000015967	-	99	95.299	MGP_PahariEiJ_G0020964	Cnot3	100	97.000	Mus_pahari
ENSPKIG00000015967	-	99	95.299	MGP_SPRETEiJ_G0030148	Cnot3	100	97.000	Mus_spretus
ENSPKIG00000015967	-	78	94.872	ENSMPUG00000010352	CNOT3	66	94.872	Mustela_putorius_furo
ENSPKIG00000015967	-	88	94.872	ENSNGAG00000013266	Cnot3	70	94.872	Nannospalax_galili
ENSPKIG00000015967	-	90	89.020	ENSNBRG00000002401	cnot3a	68	94.872	Neolamprologus_brichardi
ENSPKIG00000015967	-	99	85.597	ENSNBRG00000003336	cnot3b	92	90.265	Neolamprologus_brichardi
ENSPKIG00000015967	-	66	94.872	ENSNLEG00000006272	CNOT3	68	94.872	Nomascus_leucogenys
ENSPKIG00000015967	-	51	100.000	ENSMEUG00000002952	CNOT3	54	72.119	Notamacropus_eugenii
ENSPKIG00000015967	-	62	100.000	ENSOPRG00000001605	-	54	100.000	Ochotona_princeps
ENSPKIG00000015967	-	99	94.872	ENSODEG00000000705	CNOT3	100	89.873	Octodon_degus
ENSPKIG00000015967	-	99	96.154	ENSONIG00000007047	cnot3b	97	67.303	Oreochromis_niloticus
ENSPKIG00000015967	-	90	89.020	ENSONIG00000006568	cnot3a	63	94.872	Oreochromis_niloticus
ENSPKIG00000015967	-	88	94.872	ENSOCUG00000007691	CNOT3	64	94.872	Oryctolagus_cuniculus
ENSPKIG00000015967	-	98	97.345	ENSORLG00000005982	cnot3b	68	97.009	Oryzias_latipes
ENSPKIG00000015967	-	100	88.627	ENSORLG00000011174	cnot3a	97	63.063	Oryzias_latipes
ENSPKIG00000015967	-	98	97.345	ENSORLG00020005779	cnot3b	67	97.009	Oryzias_latipes_hni
ENSPKIG00000015967	-	100	88.627	ENSORLG00020008009	cnot3a	61	94.444	Oryzias_latipes_hni
ENSPKIG00000015967	-	100	88.627	ENSORLG00015013729	cnot3a	61	94.444	Oryzias_latipes_hsok
ENSPKIG00000015967	-	98	97.345	ENSORLG00015019021	cnot3b	67	97.009	Oryzias_latipes_hsok
ENSPKIG00000015967	-	98	95.575	ENSOMEG00000015557	cnot3b	68	95.299	Oryzias_melastigma
ENSPKIG00000015967	-	94	88.627	ENSOMEG00000010309	cnot3a	66	94.444	Oryzias_melastigma
ENSPKIG00000015967	-	78	94.872	ENSOGAG00000006945	CNOT3	63	94.872	Otolemur_garnettii
ENSPKIG00000015967	-	82	94.872	ENSPPAG00000002748	CNOT3	69	94.872	Pan_paniscus
ENSPKIG00000015967	-	78	94.872	ENSPPRG00000011705	CNOT3	66	94.872	Panthera_pardus
ENSPKIG00000015967	-	100	72.757	ENSPTIG00000008781	CNOT3	80	93.359	Panthera_tigris_altaica
ENSPKIG00000015967	-	82	94.872	ENSPTRG00000011444	CNOT3	69	94.872	Pan_troglodytes
ENSPKIG00000015967	-	82	94.872	ENSPTRG00000046717	-	69	94.872	Pan_troglodytes
ENSPKIG00000015967	-	78	94.872	ENSPANG00000009375	CNOT3	66	94.872	Papio_anubis
ENSPKIG00000015967	-	92	88.745	ENSPMGG00000022539	cnot3b	66	93.925	Periophthalmus_magnuspinnatus
ENSPKIG00000015967	-	78	95.299	ENSPEMG00000024185	Cnot3	63	95.299	Peromyscus_maniculatus_bairdii
ENSPKIG00000015967	-	78	95.299	ENSPCIG00000023018	CNOT3	97	86.096	Phascolarctos_cinereus
ENSPKIG00000015967	-	97	94.595	ENSPFOG00000007168	cnot3b	97	64.286	Poecilia_formosa
ENSPKIG00000015967	-	99	94.872	ENSPFOG00000008693	cnot3a	83	91.406	Poecilia_formosa
ENSPKIG00000015967	-	97	94.595	ENSPLAG00000013457	cnot3b	97	64.286	Poecilia_latipinna
ENSPKIG00000015967	-	99	94.872	ENSPLAG00000013324	cnot3a	67	94.872	Poecilia_latipinna
ENSPKIG00000015967	-	99	94.872	ENSPMEG00000017718	cnot3a	67	94.872	Poecilia_mexicana
ENSPKIG00000015967	-	97	94.595	ENSPMEG00000010184	cnot3b	98	64.739	Poecilia_mexicana
ENSPKIG00000015967	-	92	87.111	ENSPREG00000000662	cnot3b	97	61.910	Poecilia_reticulata
ENSPKIG00000015967	-	99	95.299	ENSPREG00000007592	cnot3a	96	89.453	Poecilia_reticulata
ENSPKIG00000015967	-	78	94.444	ENSPPYG00000010372	CNOT3	66	94.444	Pongo_abelii
ENSPKIG00000015967	-	78	94.872	ENSPCOG00000017673	CNOT3	69	94.872	Propithecus_coquereli
ENSPKIG00000015967	-	82	94.444	ENSPVAG00000015564	CNOT3	60	94.444	Pteropus_vampyrus
ENSPKIG00000015967	-	90	89.020	ENSPNYG00000002282	cnot3a	62	94.872	Pundamilia_nyererei
ENSPKIG00000015967	-	99	94.397	ENSPNYG00000003358	cnot3b	97	63.544	Pundamilia_nyererei
ENSPKIG00000015967	-	99	95.726	ENSPNAG00000027459	cnot3b	97	69.809	Pygocentrus_nattereri
ENSPKIG00000015967	-	100	90.438	ENSPNAG00000017679	cnot3a	84	93.750	Pygocentrus_nattereri
ENSPKIG00000015967	-	99	95.299	ENSRNOG00000053234	Cnot3	84	93.750	Rattus_norvegicus
ENSPKIG00000015967	-	78	94.872	ENSRBIG00000031025	CNOT3	66	94.872	Rhinopithecus_bieti
ENSPKIG00000015967	-	78	94.872	ENSRROG00000003872	CNOT3	67	94.872	Rhinopithecus_roxellana
ENSPKIG00000015967	-	99	94.872	ENSSBOG00000030268	CNOT3	69	94.872	Saimiri_boliviensis_boliviensis
ENSPKIG00000015967	-	100	98.718	ENSSFOG00015019203	-	97	74.578	Scleropages_formosus
ENSPKIG00000015967	-	99	94.024	ENSSFOG00015000248	cnot3	71	98.718	Scleropages_formosus
ENSPKIG00000015967	-	100	87.891	ENSSMAG00000013235	cnot3a	61	94.017	Scophthalmus_maximus
ENSPKIG00000015967	-	97	96.581	ENSSMAG00000016031	cnot3b	97	67.657	Scophthalmus_maximus
ENSPKIG00000015967	-	98	95.319	ENSSDUG00000008181	cnot3a	93	95.299	Seriola_dumerili
ENSPKIG00000015967	-	96	92.430	ENSSDUG00000003428	cnot3b	97	68.392	Seriola_dumerili
ENSPKIG00000015967	-	95	89.412	ENSSLDG00000014733	cnot3a	67	95.299	Seriola_lalandi_dorsalis
ENSPKIG00000015967	-	96	92.430	ENSSLDG00000014376	cnot3b	97	68.282	Seriola_lalandi_dorsalis
ENSPKIG00000015967	-	72	94.510	ENSSPUG00000008510	CNOT3	72	95.726	Sphenodon_punctatus
ENSPKIG00000015967	-	90	89.020	ENSSPAG00000003858	cnot3a	72	94.093	Stegastes_partitus
ENSPKIG00000015967	-	99	97.436	ENSSPAG00000001429	cnot3b	97	68.549	Stegastes_partitus
ENSPKIG00000015967	-	78	94.872	ENSSSCG00000003264	CNOT3	63	94.872	Sus_scrofa
ENSPKIG00000015967	-	99	94.872	ENSTRUG00000007248	cnot3b	87	90.909	Takifugu_rubripes
ENSPKIG00000015967	-	100	88.235	ENSTRUG00000015732	cnot3a	61	94.017	Takifugu_rubripes
ENSPKIG00000015967	-	91	88.627	ENSTNIG00000008082	cnot3a	66	94.444	Tetraodon_nigroviridis
ENSPKIG00000015967	-	90	94.872	ENSTNIG00000005663	cnot3b	100	64.147	Tetraodon_nigroviridis
ENSPKIG00000015967	-	78	95.299	ENSUAMG00000005234	CNOT3	66	95.299	Ursus_americanus
ENSPKIG00000015967	-	78	95.299	ENSUMAG00000010934	CNOT3	84	95.299	Ursus_maritimus
ENSPKIG00000015967	-	88	94.872	ENSVVUG00000008239	CNOT3	64	94.872	Vulpes_vulpes
ENSPKIG00000015967	-	80	92.766	ENSXETG00000003166	cnot3	69	94.468	Xenopus_tropicalis
ENSPKIG00000015967	-	86	95.495	ENSXCOG00000018976	cnot3b	99	66.783	Xiphophorus_couchianus
ENSPKIG00000015967	-	99	94.872	ENSXCOG00000019460	cnot3a	92	94.872	Xiphophorus_couchianus
ENSPKIG00000015967	-	91	95.495	ENSXMAG00000014176	cnot3b	68	93.162	Xiphophorus_maculatus
ENSPKIG00000015967	-	87	94.872	ENSXMAG00000012273	cnot3a	67	94.872	Xiphophorus_maculatus