EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000016025 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Plus strand
Length: 100011 bases
Position: chrPGUA01000579.1:88374-188384
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000038092	RRM_1	PF00076.22	3.5e-32	1	2
ENSPKIP00000038092	RRM_1	PF00076.22	3.5e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000019082	-	938	-	ENSPKIP00000038092	284 (aa)	-	-

Gene Model

Click here to download ENSPKIG00000016025's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000016025's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000016025	-	55	35.000	ENSPKIG00000004198	si:dkey-205h23.2	60	35.000
ENSPKIG00000016025	-	62	35.484	ENSPKIG00000016207	elavl3	62	37.255
ENSPKIG00000016025	-	67	37.097	ENSPKIG00000006999	elavl4	62	37.097
ENSPKIG00000016025	-	50	36.508	ENSPKIG00000024667	-	77	36.250
ENSPKIG00000016025	-	61	35.000	ENSPKIG00000010833	celf3a	51	35.000
ENSPKIG00000016025	-	73	93.750	ENSPKIG00000007989	-	81	93.750
ENSPKIG00000016025	-	55	35.000	ENSPKIG00000019554	-	51	35.065
ENSPKIG00000016025	-	64	37.824	ENSPKIG00000001903	-	63	38.728
ENSPKIG00000016025	-	70	36.073	ENSPKIG00000006187	ELAVL2	60	38.728

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000016025	-	74	90.233	ENSG00000144642	RBMS3	81	86.047	Homo_sapiens
ENSPKIG00000016025	-	86	80.632	ENSAPOG00000003432	-	50	93.269	Acanthochromis_polyacanthus
ENSPKIG00000016025	-	67	90.526	ENSACIG00000006987	-	50	93.443	Amphilophus_citrinellus
ENSPKIG00000016025	-	52	88.158	ENSACIG00000021113	RBMS3	53	96.212	Amphilophus_citrinellus
ENSPKIG00000016025	-	73	93.269	ENSAPEG00000009481	-	52	93.269	Amphiprion_percula
ENSPKIG00000016025	-	73	93.269	ENSATEG00000008433	-	50	93.269	Anabas_testudineus
ENSPKIG00000016025	-	73	91.509	ENSACAG00000028664	RBMS3	50	89.151	Anolis_carolinensis
ENSPKIG00000016025	-	74	90.233	ENSANAG00000021899	RBMS3	50	86.512	Aotus_nancymaae
ENSPKIG00000016025	-	71	88.614	ENSAMXG00000043770	-	81	87.500	Astyanax_mexicanus
ENSPKIG00000016025	-	75	94.811	ENSAMXG00000020388	rbms3	73	94.811	Astyanax_mexicanus
ENSPKIG00000016025	-	74	90.233	ENSBTAG00000044062	RBMS3	51	86.047	Bos_taurus
ENSPKIG00000016025	-	74	90.233	ENSCJAG00000004312	RBMS3	51	86.047	Callithrix_jacchus
ENSPKIG00000016025	-	74	90.233	ENSCAFG00020024980	RBMS3	54	96.250	Canis_lupus_dingo
ENSPKIG00000016025	-	74	90.233	ENSCHIG00000009144	RBMS3	51	86.047	Capra_hircus
ENSPKIG00000016025	-	73	92.788	ENSCPOG00000006457	RBMS3	50	92.788	Cavia_porcellus
ENSPKIG00000016025	-	74	90.233	ENSCCAG00000008671	RBMS3	50	86.047	Cebus_capucinus
ENSPKIG00000016025	-	74	90.233	ENSCATG00000013222	RBMS3	50	86.047	Cercocebus_atys
ENSPKIG00000016025	-	74	90.233	ENSCLAG00000005866	RBMS3	51	86.512	Chinchilla_lanigera
ENSPKIG00000016025	-	86	80.156	ENSCPBG00000022678	RBMS3	55	90.094	Chrysemys_picta_bellii
ENSPKIG00000016025	-	74	90.233	ENSCANG00000032137	RBMS3	50	86.047	Colobus_angolensis_palliatus
ENSPKIG00000016025	-	74	92.857	ENSCGRG00001007243	Rbms3	52	92.857	Cricetulus_griseus_chok1gshd
ENSPKIG00000016025	-	74	92.857	ENSCGRG00000004599	Rbms3	52	92.857	Cricetulus_griseus_crigri
ENSPKIG00000016025	-	73	93.720	ENSCSEG00000014677	-	80	93.720	Cynoglossus_semilaevis
ENSPKIG00000016025	-	86	79.842	ENSCVAG00000022814	-	78	92.188	Cyprinodon_variegatus
ENSPKIG00000016025	-	86	83.004	ENSDARG00000044574	rbms3	100	98.611	Danio_rerio
ENSPKIG00000016025	-	86	78.682	ENSDNOG00000016645	RBMS3	53	86.047	Dasypus_novemcinctus
ENSPKIG00000016025	-	74	90.233	ENSDORG00000007220	Rbms3	51	86.512	Dipodomys_ordii
ENSPKIG00000016025	-	78	57.205	ENSEBUG00000005830	rbms3	50	80.597	Eptatretus_burgeri
ENSPKIG00000016025	-	86	78.682	ENSEASG00005006152	RBMS3	56	86.047	Equus_asinus_asinus
ENSPKIG00000016025	-	74	90.233	ENSECAG00000017871	RBMS3	56	86.047	Equus_caballus
ENSPKIG00000016025	-	74	77.674	ENSEEUG00000014337	RBMS3	55	73.488	Erinaceus_europaeus
ENSPKIG00000016025	-	84	76.923	ENSELUG00000002862	rbms3	59	76.923	Esox_lucius
ENSPKIG00000016025	-	73	94.686	ENSELUG00000006905	-	84	94.231	Esox_lucius
ENSPKIG00000016025	-	74	90.233	ENSFCAG00000002130	RBMS3	51	86.512	Felis_catus
ENSPKIG00000016025	-	86	79.767	ENSFALG00000009165	RBMS3	50	87.736	Ficedula_albicollis
ENSPKIG00000016025	-	74	90.233	ENSFDAG00000008278	RBMS3	51	86.512	Fukomys_damarensis
ENSPKIG00000016025	-	86	79.767	ENSGALG00000011439	RBMS3	50	87.736	Gallus_gallus
ENSPKIG00000016025	-	86	81.028	ENSGAFG00000003329	-	50	93.750	Gambusia_affinis
ENSPKIG00000016025	-	73	87.678	ENSGAFG00000000168	rbms3	50	87.678	Gambusia_affinis
ENSPKIG00000016025	-	74	90.233	ENSGGOG00000007228	RBMS3	50	86.047	Gorilla_gorilla
ENSPKIG00000016025	-	86	75.000	ENSHBUG00000021196	rbms3	55	94.268	Haplochromis_burtoni
ENSPKIG00000016025	-	74	90.233	ENSHGLG00000002170	RBMS3	51	86.512	Heterocephalus_glaber_female
ENSPKIG00000016025	-	74	90.233	ENSHGLG00100014278	RBMS3	51	86.512	Heterocephalus_glaber_male
ENSPKIG00000016025	-	73	93.237	ENSHCOG00000007894	-	50	93.237	Hippocampus_comes
ENSPKIG00000016025	-	73	95.192	ENSIPUG00000017680	rbms3	50	95.192	Ictalurus_punctatus
ENSPKIG00000016025	-	74	90.233	ENSSTOG00000006324	RBMS3	51	86.512	Ictidomys_tridecemlineatus
ENSPKIG00000016025	-	73	86.854	ENSJJAG00000014708	Rbms3	51	84.507	Jaculus_jaculus
ENSPKIG00000016025	-	86	80.237	ENSKMAG00000012586	-	50	92.788	Kryptolebias_marmoratus
ENSPKIG00000016025	-	73	93.269	ENSLBEG00000027388	-	50	93.269	Labrus_bergylta
ENSPKIG00000016025	-	73	93.365	ENSLACG00000010581	RBMS3	50	89.100	Latimeria_chalumnae
ENSPKIG00000016025	-	74	90.233	ENSMFAG00000033300	RBMS3	51	86.047	Macaca_fascicularis
ENSPKIG00000016025	-	74	90.233	ENSMMUG00000004404	RBMS3	51	86.047	Macaca_mulatta
ENSPKIG00000016025	-	74	90.233	ENSMNEG00000035839	RBMS3	50	86.047	Macaca_nemestrina
ENSPKIG00000016025	-	74	90.233	ENSMLEG00000029464	RBMS3	50	86.047	Mandrillus_leucophaeus
ENSPKIG00000016025	-	74	92.857	ENSMAUG00000016436	Rbms3	52	92.857	Mesocricetus_auratus
ENSPKIG00000016025	-	74	90.233	ENSMICG00000049249	RBMS3	51	86.047	Microcebus_murinus
ENSPKIG00000016025	-	74	89.524	ENSMOCG00000006997	Rbms3	52	91.905	Microtus_ochrogaster
ENSPKIG00000016025	-	86	80.632	ENSMMOG00000015071	-	50	93.269	Mola_mola
ENSPKIG00000016025	-	73	93.750	ENSMALG00000009155	-	50	93.750	Monopterus_albus
ENSPKIG00000016025	-	74	91.429	MGP_CAROLIEiJ_G0032783	Rbms3	77	94.969	Mus_caroli
ENSPKIG00000016025	-	74	92.857	ENSMUSG00000039607	Rbms3	100	93.237	Mus_musculus
ENSPKIG00000016025	-	74	92.857	MGP_PahariEiJ_G0015650	Rbms3	100	93.237	Mus_pahari
ENSPKIG00000016025	-	74	92.857	MGP_SPRETEiJ_G0033930	Rbms3	100	93.237	Mus_spretus
ENSPKIG00000016025	-	74	90.233	ENSMLUG00000000659	RBMS3	51	86.512	Myotis_lucifugus
ENSPKIG00000016025	-	74	93.333	ENSNGAG00000014039	Rbms3	50	93.333	Nannospalax_galili
ENSPKIG00000016025	-	86	80.632	ENSNBRG00000018065	-	50	93.269	Neolamprologus_brichardi
ENSPKIG00000016025	-	74	90.233	ENSNLEG00000004129	RBMS3	50	86.047	Nomascus_leucogenys
ENSPKIG00000016025	-	74	89.767	ENSODEG00000003651	RBMS3	51	86.047	Octodon_degus
ENSPKIG00000016025	-	86	80.632	ENSORLG00000002306	-	50	93.269	Oryzias_latipes
ENSPKIG00000016025	-	73	86.385	ENSORLG00020022674	RBMS3	65	93.711	Oryzias_latipes_hni
ENSPKIG00000016025	-	86	80.632	ENSORLG00020008496	-	50	93.269	Oryzias_latipes_hni
ENSPKIG00000016025	-	73	87.204	ENSORLG00015005509	rbms3	65	93.711	Oryzias_latipes_hsok
ENSPKIG00000016025	-	86	80.632	ENSORLG00015015719	-	50	93.269	Oryzias_latipes_hsok
ENSPKIG00000016025	-	73	87.678	ENSOMEG00000014805	RBMS3	50	87.678	Oryzias_melastigma
ENSPKIG00000016025	-	74	90.233	ENSPPAG00000036519	RBMS3	50	86.047	Pan_paniscus
ENSPKIG00000016025	-	74	89.767	ENSPPRG00000002761	RBMS3	50	86.977	Panthera_pardus
ENSPKIG00000016025	-	74	89.767	ENSPTIG00000011568	RBMS3	51	86.977	Panthera_tigris_altaica
ENSPKIG00000016025	-	74	90.233	ENSPTRG00000014709	RBMS3	51	86.047	Pan_troglodytes
ENSPKIG00000016025	-	74	90.233	ENSPANG00000010234	RBMS3	50	86.047	Papio_anubis
ENSPKIG00000016025	-	86	79.767	ENSPSIG00000005269	RBMS3	50	87.736	Pelodiscus_sinensis
ENSPKIG00000016025	-	63	92.737	ENSPMGG00000021683	-	80	92.513	Periophthalmus_magnuspinnatus
ENSPKIG00000016025	-	74	92.857	ENSPEMG00000001117	Rbms3	53	92.857	Peromyscus_maniculatus_bairdii
ENSPKIG00000016025	-	74	90.323	ENSPCIG00000006106	RBMS3	90	85.321	Phascolarctos_cinereus
ENSPKIG00000016025	-	73	87.678	ENSPFOG00000017887	rbms3	50	87.678	Poecilia_formosa
ENSPKIG00000016025	-	73	92.788	ENSPMEG00000002993	-	50	92.788	Poecilia_mexicana
ENSPKIG00000016025	-	73	93.720	ENSPREG00000018221	-	80	93.269	Poecilia_reticulata
ENSPKIG00000016025	-	74	90.233	ENSPCOG00000017136	RBMS3	50	86.047	Propithecus_coquereli
ENSPKIG00000016025	-	86	80.632	ENSPNYG00000012624	-	50	93.269	Pundamilia_nyererei
ENSPKIG00000016025	-	73	96.635	ENSPNAG00000001800	rbms3	50	96.635	Pygocentrus_nattereri
ENSPKIG00000016025	-	65	89.189	ENSPNAG00000026763	-	70	93.711	Pygocentrus_nattereri
ENSPKIG00000016025	-	74	93.333	ENSRNOG00000025881	Rbms3	53	93.333	Rattus_norvegicus
ENSPKIG00000016025	-	74	90.233	ENSRBIG00000035863	RBMS3	50	86.047	Rhinopithecus_bieti
ENSPKIG00000016025	-	74	90.233	ENSSBOG00000020232	RBMS3	50	86.047	Saimiri_boliviensis_boliviensis
ENSPKIG00000016025	-	86	81.028	ENSSFOG00015008578	rbms3	54	93.750	Scleropages_formosus
ENSPKIG00000016025	-	73	94.231	ENSSMAG00000020065	-	78	94.231	Scophthalmus_maximus
ENSPKIG00000016025	-	86	80.632	ENSSDUG00000019287	-	50	93.269	Seriola_dumerili
ENSPKIG00000016025	-	86	80.632	ENSSLDG00000013224	-	50	93.269	Seriola_lalandi_dorsalis
ENSPKIG00000016025	-	86	80.632	ENSSPAG00000003983	-	50	93.269	Stegastes_partitus
ENSPKIG00000016025	-	86	78.682	ENSSSCG00000036381	RBMS3	55	86.047	Sus_scrofa
ENSPKIG00000016025	-	74	90.233	ENSUMAG00000000263	RBMS3	54	86.512	Ursus_maritimus
ENSPKIG00000016025	-	63	91.304	ENSVVUG00000004660	RBMS3	74	93.293	Vulpes_vulpes
ENSPKIG00000016025	-	73	93.269	ENSXMAG00000014382	-	50	93.269	Xiphophorus_maculatus