EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPKIG00000016037 (Gene tree)
Gene ID: 111848317
Gene Symbol: exosc1
Alias: -
Full Name: exosome component 1
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Plus strand
Length: 5534 bases
Position: chrPGUA01000019.1:2998605-3004138
Accession: 111848317
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000038143	EXOSC1	PF10447.9	1.1e-15	1	1
ENSPKIP00000038131	ECR1_N	PF14382.6	1.2e-12	1	1
ENSPKIP00000038143	ECR1_N	PF14382.6	1.4e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000019119	-	453	-	ENSPKIP00000038131	150 (aa)	-	-
ENSPKIT00000019132	-	2622	-	ENSPKIP00000038143	194 (aa)	XP_023675976	UPI000CD65C83

Gene Model

Click here to download ENSPKIG00000016037's gene model file

Pathways

Pathway ID	Pathway Name	Source
pki03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000016037's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000016037	exosc1	98	80.628	ENSG00000171311	EXOSC1	98	80.628	Homo_sapiens
ENSPKIG00000016037	exosc1	100	92.784	ENSAPOG00000007822	exosc1	100	92.784	Acanthochromis_polyacanthus
ENSPKIG00000016037	exosc1	98	81.675	ENSAMEG00000000129	EXOSC1	98	81.675	Ailuropoda_melanoleuca
ENSPKIG00000016037	exosc1	95	91.351	ENSACIG00000018956	exosc1	91	91.351	Amphilophus_citrinellus
ENSPKIG00000016037	exosc1	100	92.268	ENSAOCG00000010699	exosc1	100	92.268	Amphiprion_ocellaris
ENSPKIG00000016037	exosc1	93	81.667	ENSAPEG00000012690	exosc1	97	81.667	Amphiprion_percula
ENSPKIG00000016037	exosc1	100	91.753	ENSATEG00000018683	exosc1	100	91.753	Anabas_testudineus
ENSPKIG00000016037	exosc1	96	80.214	ENSACAG00000002101	EXOSC1	96	80.214	Anolis_carolinensis
ENSPKIG00000016037	exosc1	98	81.152	ENSANAG00000034669	EXOSC1	98	81.152	Aotus_nancymaae
ENSPKIG00000016037	exosc1	100	91.753	ENSACLG00000021243	exosc1	100	91.753	Astatotilapia_calliptera
ENSPKIG00000016037	exosc1	100	93.814	ENSAMXG00000011116	exosc1	100	93.814	Astyanax_mexicanus
ENSPKIG00000016037	exosc1	98	81.675	ENSBTAG00000012699	EXOSC1	98	81.675	Bos_taurus
ENSPKIG00000016037	exosc1	96	35.714	WBGene00012966	exos-1	94	35.714	Caenorhabditis_elegans
ENSPKIG00000016037	exosc1	98	80.628	ENSCJAG00000016586	EXOSC1	98	80.628	Callithrix_jacchus
ENSPKIG00000016037	exosc1	98	81.152	ENSCAFG00000009068	EXOSC1	92	81.152	Canis_familiaris
ENSPKIG00000016037	exosc1	98	81.152	ENSCAFG00020006002	EXOSC1	92	81.152	Canis_lupus_dingo
ENSPKIG00000016037	exosc1	98	81.675	ENSCHIG00000015253	EXOSC1	98	81.675	Capra_hircus
ENSPKIG00000016037	exosc1	98	80.105	ENSTSYG00000000760	EXOSC1	98	80.105	Carlito_syrichta
ENSPKIG00000016037	exosc1	98	81.152	ENSCPOG00000001173	EXOSC1	98	81.152	Cavia_porcellus
ENSPKIG00000016037	exosc1	97	46.405	ENSCCAG00000023986	EXOSC1	97	46.405	Cebus_capucinus
ENSPKIG00000016037	exosc1	98	80.628	ENSCATG00000034114	EXOSC1	98	80.628	Cercocebus_atys
ENSPKIG00000016037	exosc1	98	81.152	ENSCLAG00000002463	EXOSC1	98	81.152	Chinchilla_lanigera
ENSPKIG00000016037	exosc1	98	80.105	ENSCSAG00000005870	EXOSC1	98	80.105	Chlorocebus_sabaeus
ENSPKIG00000016037	exosc1	95	68.478	ENSCHOG00000006477	EXOSC1	98	68.478	Choloepus_hoffmanni
ENSPKIG00000016037	exosc1	55	70.093	ENSCPBG00000011949	EXOSC1	88	70.093	Chrysemys_picta_bellii
ENSPKIG00000016037	exosc1	99	53.368	ENSCING00000022734	-	92	53.368	Ciona_intestinalis
ENSPKIG00000016037	exosc1	99	56.995	ENSCSAVG00000010865	-	98	56.995	Ciona_savignyi
ENSPKIG00000016037	exosc1	98	80.628	ENSCANG00000034159	EXOSC1	98	80.628	Colobus_angolensis_palliatus
ENSPKIG00000016037	exosc1	98	80.105	ENSCGRG00001000335	Exosc1	98	80.105	Cricetulus_griseus_chok1gshd
ENSPKIG00000016037	exosc1	98	80.105	ENSCGRG00000011602	Exosc1	98	80.105	Cricetulus_griseus_crigri
ENSPKIG00000016037	exosc1	100	79.381	ENSCSEG00000007895	exosc1	97	79.381	Cynoglossus_semilaevis
ENSPKIG00000016037	exosc1	100	85.567	ENSCVAG00000016748	exosc1	100	85.567	Cyprinodon_variegatus
ENSPKIG00000016037	exosc1	100	93.814	ENSDARG00000059841	exosc1	100	93.814	Danio_rerio
ENSPKIG00000016037	exosc1	74	77.241	ENSDNOG00000007983	EXOSC1	98	77.241	Dasypus_novemcinctus
ENSPKIG00000016037	exosc1	98	80.628	ENSDORG00000016528	Exosc1	98	80.628	Dipodomys_ordii
ENSPKIG00000016037	exosc1	95	50.000	FBgn0032346	Csl4	92	50.000	Drosophila_melanogaster
ENSPKIG00000016037	exosc1	98	79.581	ENSETEG00000002469	-	98	79.581	Echinops_telfairi
ENSPKIG00000016037	exosc1	97	68.229	ENSEBUG00000008164	exosc1	96	68.229	Eptatretus_burgeri
ENSPKIG00000016037	exosc1	98	73.298	ENSEASG00005008684	EXOSC1	98	73.298	Equus_asinus_asinus
ENSPKIG00000016037	exosc1	60	57.759	ENSECAG00000010621	EXOSC1	69	57.759	Equus_caballus
ENSPKIG00000016037	exosc1	98	80.628	ENSEEUG00000005647	EXOSC1	98	80.628	Erinaceus_europaeus
ENSPKIG00000016037	exosc1	96	89.247	ENSELUG00000017369	exosc1	99	72.449	Esox_lucius
ENSPKIG00000016037	exosc1	98	81.675	ENSFCAG00000040563	EXOSC1	92	81.675	Felis_catus
ENSPKIG00000016037	exosc1	98	79.581	ENSFALG00000008450	EXOSC1	98	79.581	Ficedula_albicollis
ENSPKIG00000016037	exosc1	98	81.675	ENSFDAG00000000846	EXOSC1	98	81.675	Fukomys_damarensis
ENSPKIG00000016037	exosc1	100	85.567	ENSFHEG00000009154	exosc1	100	85.567	Fundulus_heteroclitus
ENSPKIG00000016037	exosc1	100	90.722	ENSGMOG00000008993	exosc1	100	90.722	Gadus_morhua
ENSPKIG00000016037	exosc1	98	68.586	ENSGALG00000039917	EXOSC1	99	84.828	Gallus_gallus
ENSPKIG00000016037	exosc1	100	86.598	ENSGAFG00000010265	exosc1	95	86.598	Gambusia_affinis
ENSPKIG00000016037	exosc1	100	88.660	ENSGACG00000018936	exosc1	100	88.660	Gasterosteus_aculeatus
ENSPKIG00000016037	exosc1	98	78.534	ENSGAGG00000019192	EXOSC1	98	78.534	Gopherus_agassizii
ENSPKIG00000016037	exosc1	98	70.157	ENSGGOG00000003099	EXOSC1	98	70.157	Gorilla_gorilla
ENSPKIG00000016037	exosc1	100	91.753	ENSHBUG00000017857	exosc1	100	91.753	Haplochromis_burtoni
ENSPKIG00000016037	exosc1	98	81.152	ENSHGLG00000016927	EXOSC1	98	81.152	Heterocephalus_glaber_female
ENSPKIG00000016037	exosc1	98	81.152	ENSHGLG00100012208	EXOSC1	98	81.152	Heterocephalus_glaber_male
ENSPKIG00000016037	exosc1	100	89.691	ENSHCOG00000019882	exosc1	100	89.691	Hippocampus_comes
ENSPKIG00000016037	exosc1	100	92.784	ENSIPUG00000007685	exosc1	100	92.784	Ictalurus_punctatus
ENSPKIG00000016037	exosc1	61	63.866	ENSSTOG00000029860	-	91	63.866	Ictidomys_tridecemlineatus
ENSPKIG00000016037	exosc1	98	80.628	ENSSTOG00000006615	EXOSC1	98	80.628	Ictidomys_tridecemlineatus
ENSPKIG00000016037	exosc1	98	81.152	ENSJJAG00000013311	Exosc1	98	81.152	Jaculus_jaculus
ENSPKIG00000016037	exosc1	100	90.722	ENSKMAG00000001202	exosc1	82	90.722	Kryptolebias_marmoratus
ENSPKIG00000016037	exosc1	100	91.237	ENSLBEG00000011448	exosc1	100	91.237	Labrus_bergylta
ENSPKIG00000016037	exosc1	99	77.987	ENSLOCG00000003776	exosc1	100	77.987	Lepisosteus_oculatus
ENSPKIG00000016037	exosc1	98	81.152	ENSLAFG00000015983	EXOSC1	98	81.152	Loxodonta_africana
ENSPKIG00000016037	exosc1	98	80.628	ENSMFAG00000001493	EXOSC1	98	80.628	Macaca_fascicularis
ENSPKIG00000016037	exosc1	98	80.628	ENSMMUG00000020028	EXOSC1	98	73.846	Macaca_mulatta
ENSPKIG00000016037	exosc1	98	80.628	ENSMNEG00000029816	EXOSC1	98	80.628	Macaca_nemestrina
ENSPKIG00000016037	exosc1	98	74.869	ENSMLEG00000027643	EXOSC1	98	74.869	Mandrillus_leucophaeus
ENSPKIG00000016037	exosc1	100	92.784	ENSMAMG00000012200	exosc1	100	92.784	Mastacembelus_armatus
ENSPKIG00000016037	exosc1	100	91.753	ENSMZEG00005007042	exosc1	100	91.753	Maylandia_zebra
ENSPKIG00000016037	exosc1	98	70.681	ENSMAUG00000020462	-	98	70.681	Mesocricetus_auratus
ENSPKIG00000016037	exosc1	98	81.152	ENSMICG00000007664	EXOSC1	91	81.152	Microcebus_murinus
ENSPKIG00000016037	exosc1	97	75.661	ENSMOCG00000017124	-	96	75.661	Microtus_ochrogaster
ENSPKIG00000016037	exosc1	98	80.105	ENSMOCG00000006004	-	98	80.105	Microtus_ochrogaster
ENSPKIG00000016037	exosc1	99	78.431	ENSMMOG00000021403	exosc1	100	78.431	Mola_mola
ENSPKIG00000016037	exosc1	98	81.771	ENSMODG00000004213	EXOSC1	98	81.771	Monodelphis_domestica
ENSPKIG00000016037	exosc1	95	91.892	ENSMALG00000007061	exosc1	93	91.892	Monopterus_albus
ENSPKIG00000016037	exosc1	98	79.581	MGP_CAROLIEiJ_G0022959	Exosc1	98	79.581	Mus_caroli
ENSPKIG00000016037	exosc1	98	79.581	ENSMUSG00000034321	Exosc1	98	79.581	Mus_musculus
ENSPKIG00000016037	exosc1	98	80.105	MGP_PahariEiJ_G0014449	Exosc1	98	80.105	Mus_pahari
ENSPKIG00000016037	exosc1	98	79.581	MGP_SPRETEiJ_G0023880	Exosc1	98	79.581	Mus_spretus
ENSPKIG00000016037	exosc1	98	81.675	ENSMPUG00000017044	EXOSC1	98	81.675	Mustela_putorius_furo
ENSPKIG00000016037	exosc1	98	81.152	ENSMLUG00000009228	EXOSC1	98	81.152	Myotis_lucifugus
ENSPKIG00000016037	exosc1	98	78.534	ENSNGAG00000022033	Exosc1	98	78.534	Nannospalax_galili
ENSPKIG00000016037	exosc1	100	81.818	ENSNBRG00000024007	exosc1	100	81.818	Neolamprologus_brichardi
ENSPKIG00000016037	exosc1	98	80.105	ENSNLEG00000013872	EXOSC1	98	80.105	Nomascus_leucogenys
ENSPKIG00000016037	exosc1	58	71.429	ENSMEUG00000002246	EXOSC1	97	71.429	Notamacropus_eugenii
ENSPKIG00000016037	exosc1	98	80.628	ENSOPRG00000005065	EXOSC1	98	80.628	Ochotona_princeps
ENSPKIG00000016037	exosc1	98	81.675	ENSODEG00000016709	EXOSC1	98	81.675	Octodon_degus
ENSPKIG00000016037	exosc1	100	91.753	ENSONIG00000017683	exosc1	99	91.753	Oreochromis_niloticus
ENSPKIG00000016037	exosc1	59	91.228	ENSOANG00000006563	EXOSC1	98	87.805	Ornithorhynchus_anatinus
ENSPKIG00000016037	exosc1	99	75.000	ENSOCUG00000026461	-	98	75.000	Oryctolagus_cuniculus
ENSPKIG00000016037	exosc1	98	79.688	ENSOCUG00000011898	-	98	79.688	Oryctolagus_cuniculus
ENSPKIG00000016037	exosc1	100	85.641	ENSORLG00000011595	exosc1	100	85.641	Oryzias_latipes
ENSPKIG00000016037	exosc1	100	85.641	ENSORLG00020005831	exosc1	100	85.641	Oryzias_latipes_hni
ENSPKIG00000016037	exosc1	100	85.128	ENSORLG00015004317	exosc1	100	85.128	Oryzias_latipes_hsok
ENSPKIG00000016037	exosc1	100	72.165	ENSOMEG00000013907	exosc1	99	72.165	Oryzias_melastigma
ENSPKIG00000016037	exosc1	98	80.628	ENSOGAG00000016259	EXOSC1	98	80.628	Otolemur_garnettii
ENSPKIG00000016037	exosc1	98	81.152	ENSOARG00000010136	EXOSC1	98	81.152	Ovis_aries
ENSPKIG00000016037	exosc1	98	74.611	ENSPPAG00000039842	EXOSC1	98	74.611	Pan_paniscus
ENSPKIG00000016037	exosc1	98	81.675	ENSPPRG00000023366	EXOSC1	98	81.675	Panthera_pardus
ENSPKIG00000016037	exosc1	98	81.675	ENSPTIG00000017701	EXOSC1	98	81.675	Panthera_tigris_altaica
ENSPKIG00000016037	exosc1	98	80.628	ENSPTRG00000002808	EXOSC1	98	80.628	Pan_troglodytes
ENSPKIG00000016037	exosc1	98	80.628	ENSPANG00000021324	EXOSC1	98	80.628	Papio_anubis
ENSPKIG00000016037	exosc1	91	65.789	ENSPSIG00000013571	EXOSC1	98	79.339	Pelodiscus_sinensis
ENSPKIG00000016037	exosc1	100	80.412	ENSPMGG00000014002	exosc1	100	80.412	Periophthalmus_magnuspinnatus
ENSPKIG00000016037	exosc1	98	80.105	ENSPEMG00000010710	-	98	80.105	Peromyscus_maniculatus_bairdii
ENSPKIG00000016037	exosc1	95	69.892	ENSPMAG00000000195	exosc1	95	69.892	Petromyzon_marinus
ENSPKIG00000016037	exosc1	98	80.628	ENSPCIG00000002210	EXOSC1	97	80.628	Phascolarctos_cinereus
ENSPKIG00000016037	exosc1	100	86.082	ENSPFOG00000006755	exosc1	95	86.082	Poecilia_formosa
ENSPKIG00000016037	exosc1	100	86.082	ENSPLAG00000005880	exosc1	100	86.082	Poecilia_latipinna
ENSPKIG00000016037	exosc1	100	86.082	ENSPMEG00000015598	exosc1	95	86.082	Poecilia_mexicana
ENSPKIG00000016037	exosc1	100	74.227	ENSPREG00000000405	exosc1	94	74.227	Poecilia_reticulata
ENSPKIG00000016037	exosc1	98	80.628	ENSPPYG00000002531	EXOSC1	98	80.628	Pongo_abelii
ENSPKIG00000016037	exosc1	98	80.105	ENSPCAG00000009135	EXOSC1	98	80.105	Procavia_capensis
ENSPKIG00000016037	exosc1	98	74.869	ENSPCOG00000027539	EXOSC1	98	74.869	Propithecus_coquereli
ENSPKIG00000016037	exosc1	98	81.152	ENSPVAG00000003372	EXOSC1	98	81.152	Pteropus_vampyrus
ENSPKIG00000016037	exosc1	100	91.753	ENSPNYG00000021745	exosc1	100	91.753	Pundamilia_nyererei
ENSPKIG00000016037	exosc1	100	93.814	ENSPNAG00000001944	exosc1	100	93.814	Pygocentrus_nattereri
ENSPKIG00000016037	exosc1	98	80.105	ENSRNOG00000048708	Exosc1	98	80.105	Rattus_norvegicus
ENSPKIG00000016037	exosc1	98	80.628	ENSRBIG00000035618	EXOSC1	98	80.628	Rhinopithecus_bieti
ENSPKIG00000016037	exosc1	98	80.628	ENSRROG00000032589	EXOSC1	91	80.628	Rhinopithecus_roxellana
ENSPKIG00000016037	exosc1	65	37.423	YNL232W	CSL4	55	37.423	Saccharomyces_cerevisiae
ENSPKIG00000016037	exosc1	98	81.152	ENSSBOG00000000359	EXOSC1	98	81.152	Saimiri_boliviensis_boliviensis
ENSPKIG00000016037	exosc1	75	90.411	ENSSHAG00000018219	EXOSC1	99	90.411	Sarcophilus_harrisii
ENSPKIG00000016037	exosc1	100	92.784	ENSSFOG00015009069	exosc1	100	92.784	Scleropages_formosus
ENSPKIG00000016037	exosc1	100	90.722	ENSSFOG00015016289	-	100	90.722	Scleropages_formosus
ENSPKIG00000016037	exosc1	100	92.268	ENSSMAG00000003721	exosc1	100	92.268	Scophthalmus_maximus
ENSPKIG00000016037	exosc1	100	91.237	ENSSDUG00000002993	exosc1	100	91.237	Seriola_dumerili
ENSPKIG00000016037	exosc1	100	91.237	ENSSLDG00000025181	exosc1	100	91.237	Seriola_lalandi_dorsalis
ENSPKIG00000016037	exosc1	98	70.157	ENSSARG00000000162	EXOSC1	98	70.157	Sorex_araneus
ENSPKIG00000016037	exosc1	98	75.393	ENSSPUG00000012263	EXOSC1	98	75.393	Sphenodon_punctatus
ENSPKIG00000016037	exosc1	100	83.505	ENSSPAG00000016792	exosc1	83	83.505	Stegastes_partitus
ENSPKIG00000016037	exosc1	98	80.628	ENSSSCG00000010518	EXOSC1	89	80.628	Sus_scrofa
ENSPKIG00000016037	exosc1	98	79.058	ENSTGUG00000009692	EXOSC1	98	79.058	Taeniopygia_guttata
ENSPKIG00000016037	exosc1	98	80.526	ENSTRUG00000007706	exosc1	98	80.526	Takifugu_rubripes
ENSPKIG00000016037	exosc1	98	80.311	ENSTNIG00000014079	exosc1	97	80.311	Tetraodon_nigroviridis
ENSPKIG00000016037	exosc1	98	75.393	ENSTBEG00000006011	EXOSC1	98	75.393	Tupaia_belangeri
ENSPKIG00000016037	exosc1	94	83.060	ENSTTRG00000009887	EXOSC1	99	83.060	Tursiops_truncatus
ENSPKIG00000016037	exosc1	98	65.445	ENSUAMG00000010266	EXOSC1	98	65.445	Ursus_americanus
ENSPKIG00000016037	exosc1	98	65.445	ENSUMAG00000022002	EXOSC1	98	65.445	Ursus_maritimus
ENSPKIG00000016037	exosc1	98	81.152	ENSVVUG00000023192	EXOSC1	62	81.152	Vulpes_vulpes
ENSPKIG00000016037	exosc1	99	77.720	ENSXETG00000003434	exosc1	99	77.720	Xenopus_tropicalis
ENSPKIG00000016037	exosc1	62	89.256	ENSXCOG00000014499	exosc1	93	89.256	Xiphophorus_couchianus
ENSPKIG00000016037	exosc1	100	74.742	ENSXMAG00000023382	exosc1	94	74.742	Xiphophorus_maculatus