EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000016172 (Gene tree)
Gene ID: 111841568
Gene Symbol: rad54l
Alias: -
Full Name: RAD54 like
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Plus strand
Length: 17448 bases
Position: chrPGUA01000086.1:22816-40263
Accession: 111841568
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000038368	ResIII	PF04851.15	1.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000019358	-	4994	-	ENSPKIP00000038368	735 (aa)	XP_023663173	UPI000CD624FC

Gene Model

Click here to download ENSPKIG00000016172's gene model file

Pathways

Pathway ID	Pathway Name	Source
pki03440	Homologous recombination	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000016172's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000016172	rad54l	95	41.001	ENSPKIG00000014974	rad54b	77	41.192
ENSPKIG00000016172	rad54l	68	30.539	ENSPKIG00000022166	chd1l	53	30.539
ENSPKIG00000016172	rad54l	70	30.309	ENSPKIG00000015699	SMARCA5	51	30.498

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000016172	rad54l	99	76.344	ENSG00000085999	RAD54L	100	86.667	Homo_sapiens
ENSPKIG00000016172	rad54l	99	76.255	ENSAPOG00000011643	rad54l	99	76.255	Acanthochromis_polyacanthus
ENSPKIG00000016172	rad54l	99	76.312	ENSAMEG00000013902	RAD54L	99	76.312	Ailuropoda_melanoleuca
ENSPKIG00000016172	rad54l	99	77.823	ENSACIG00000001939	rad54l	99	77.823	Amphilophus_citrinellus
ENSPKIG00000016172	rad54l	99	79.512	ENSAOCG00000017576	rad54l	99	79.512	Amphiprion_ocellaris
ENSPKIG00000016172	rad54l	96	80.453	ENSAPEG00000020658	rad54l	98	80.453	Amphiprion_percula
ENSPKIG00000016172	rad54l	94	80.891	ENSATEG00000006767	rad54l	99	80.891	Anabas_testudineus
ENSPKIG00000016172	rad54l	94	80.375	ENSAPLG00000006389	RAD54L	99	80.375	Anas_platyrhynchos
ENSPKIG00000016172	rad54l	99	77.181	ENSACAG00000002312	RAD54L	99	77.181	Anolis_carolinensis
ENSPKIG00000016172	rad54l	99	76.344	ENSANAG00000035439	RAD54L	99	76.344	Aotus_nancymaae
ENSPKIG00000016172	rad54l	99	77.341	ENSACLG00000018711	rad54l	99	77.341	Astatotilapia_calliptera
ENSPKIG00000016172	rad54l	99	79.026	ENSAMXG00000012777	rad54l	99	79.026	Astyanax_mexicanus
ENSPKIG00000016172	rad54l	99	76.913	ENSBTAG00000019901	RAD54L	99	76.913	Bos_taurus
ENSPKIG00000016172	rad54l	91	58.346	WBGene00004298	rad-54	82	58.346	Caenorhabditis_elegans
ENSPKIG00000016172	rad54l	97	77.051	ENSCJAG00000021080	RAD54L	91	77.051	Callithrix_jacchus
ENSPKIG00000016172	rad54l	99	76.344	ENSCAFG00000004272	RAD54L	99	76.344	Canis_familiaris
ENSPKIG00000016172	rad54l	99	76.312	ENSCAFG00020015066	RAD54L	99	76.312	Canis_lupus_dingo
ENSPKIG00000016172	rad54l	99	76.747	ENSCHIG00000020118	RAD54L	99	76.747	Capra_hircus
ENSPKIG00000016172	rad54l	99	76.273	ENSTSYG00000002032	RAD54L	99	76.273	Carlito_syrichta
ENSPKIG00000016172	rad54l	99	76.882	ENSCPOG00000006768	RAD54L	99	76.882	Cavia_porcellus
ENSPKIG00000016172	rad54l	99	76.747	ENSCCAG00000025783	RAD54L	99	76.747	Cebus_capucinus
ENSPKIG00000016172	rad54l	99	76.478	ENSCATG00000030589	RAD54L	99	76.478	Cercocebus_atys
ENSPKIG00000016172	rad54l	99	76.747	ENSCLAG00000004645	RAD54L	99	76.747	Chinchilla_lanigera
ENSPKIG00000016172	rad54l	99	76.344	ENSCSAG00000001229	RAD54L	99	76.344	Chlorocebus_sabaeus
ENSPKIG00000016172	rad54l	99	77.058	ENSCPBG00000005675	RAD54L	99	77.058	Chrysemys_picta_bellii
ENSPKIG00000016172	rad54l	100	61.508	ENSCING00000024456	-	100	61.248	Ciona_intestinalis
ENSPKIG00000016172	rad54l	100	60.807	ENSCSAVG00000010859	-	100	60.468	Ciona_savignyi
ENSPKIG00000016172	rad54l	99	76.478	ENSCANG00000034891	RAD54L	99	76.478	Colobus_angolensis_palliatus
ENSPKIG00000016172	rad54l	99	76.312	ENSCGRG00001014807	Rad54l	99	76.312	Cricetulus_griseus_chok1gshd
ENSPKIG00000016172	rad54l	99	76.312	ENSCGRG00000016038	Rad54l	99	76.312	Cricetulus_griseus_crigri
ENSPKIG00000016172	rad54l	99	78.668	ENSCSEG00000001983	rad54l	99	78.668	Cynoglossus_semilaevis
ENSPKIG00000016172	rad54l	78	83.468	ENSCVAG00000019561	rad54l	100	83.468	Cyprinodon_variegatus
ENSPKIG00000016172	rad54l	99	78.862	ENSDARG00000018623	rad54l	99	78.862	Danio_rerio
ENSPKIG00000016172	rad54l	99	76.344	ENSDNOG00000003395	RAD54L	99	76.344	Dasypus_novemcinctus
ENSPKIG00000016172	rad54l	99	69.733	ENSDORG00000002632	Rad54l	99	69.867	Dipodomys_ordii
ENSPKIG00000016172	rad54l	99	55.526	FBgn0002989	okr	95	54.993	Drosophila_melanogaster
ENSPKIG00000016172	rad54l	77	74.017	ENSETEG00000000550	RAD54L	77	74.017	Echinops_telfairi
ENSPKIG00000016172	rad54l	99	76.043	ENSEASG00005004511	RAD54L	99	76.312	Equus_asinus_asinus
ENSPKIG00000016172	rad54l	99	76.478	ENSECAG00000008760	RAD54L	99	76.747	Equus_caballus
ENSPKIG00000016172	rad54l	99	74.059	ENSEEUG00000008113	RAD54L	99	74.059	Erinaceus_europaeus
ENSPKIG00000016172	rad54l	99	81.806	ENSELUG00000002295	rad54l	99	81.806	Esox_lucius
ENSPKIG00000016172	rad54l	99	76.344	ENSFCAG00000003444	RAD54L	99	76.344	Felis_catus
ENSPKIG00000016172	rad54l	99	78.677	ENSFALG00000009480	RAD54L	99	78.812	Ficedula_albicollis
ENSPKIG00000016172	rad54l	99	76.070	ENSFDAG00000007806	RAD54L	99	76.070	Fukomys_damarensis
ENSPKIG00000016172	rad54l	62	75.862	ENSFHEG00000009824	rad54l	80	75.862	Fundulus_heteroclitus
ENSPKIG00000016172	rad54l	99	78.474	ENSGMOG00000014568	rad54l	99	78.474	Gadus_morhua
ENSPKIG00000016172	rad54l	99	78.620	ENSGALG00000010356	RAD54L	92	78.620	Gallus_gallus
ENSPKIG00000016172	rad54l	91	77.596	ENSGAFG00000011110	rad54l	100	77.596	Gambusia_affinis
ENSPKIG00000016172	rad54l	99	77.943	ENSGACG00000003111	rad54l	97	77.943	Gasterosteus_aculeatus
ENSPKIG00000016172	rad54l	99	76.216	ENSGAGG00000014089	RAD54L	96	76.216	Gopherus_agassizii
ENSPKIG00000016172	rad54l	99	76.210	ENSGGOG00000010602	RAD54L	99	76.210	Gorilla_gorilla
ENSPKIG00000016172	rad54l	99	77.038	ENSHBUG00000007793	rad54l	99	77.038	Haplochromis_burtoni
ENSPKIG00000016172	rad54l	99	76.882	ENSHGLG00000000753	RAD54L	99	76.882	Heterocephalus_glaber_female
ENSPKIG00000016172	rad54l	99	76.882	ENSHGLG00100016987	RAD54L	99	76.882	Heterocephalus_glaber_male
ENSPKIG00000016172	rad54l	99	79.139	ENSIPUG00000015999	rad54l	99	81.124	Ictalurus_punctatus
ENSPKIG00000016172	rad54l	99	76.210	ENSSTOG00000029125	RAD54L	99	76.210	Ictidomys_tridecemlineatus
ENSPKIG00000016172	rad54l	99	65.811	ENSJJAG00000000235	-	99	65.541	Jaculus_jaculus
ENSPKIG00000016172	rad54l	100	78.273	ENSKMAG00000009944	rad54l	100	78.273	Kryptolebias_marmoratus
ENSPKIG00000016172	rad54l	99	79.404	ENSLBEG00000014617	rad54l	97	82.861	Labrus_bergylta
ENSPKIG00000016172	rad54l	99	80.650	ENSLOCG00000004144	rad54l	100	81.399	Lepisosteus_oculatus
ENSPKIG00000016172	rad54l	99	76.043	ENSLAFG00000007583	RAD54L	99	76.447	Loxodonta_africana
ENSPKIG00000016172	rad54l	99	76.478	ENSMFAG00000031241	RAD54L	99	76.478	Macaca_fascicularis
ENSPKIG00000016172	rad54l	99	76.478	ENSMMUG00000011568	RAD54L	99	76.478	Macaca_mulatta
ENSPKIG00000016172	rad54l	99	76.613	ENSMNEG00000038562	RAD54L	99	76.613	Macaca_nemestrina
ENSPKIG00000016172	rad54l	99	76.478	ENSMLEG00000038145	RAD54L	99	76.478	Mandrillus_leucophaeus
ENSPKIG00000016172	rad54l	99	78.138	ENSMAMG00000022180	rad54l	99	82.265	Mastacembelus_armatus
ENSPKIG00000016172	rad54l	99	77.205	ENSMZEG00005018081	rad54l	99	77.205	Maylandia_zebra
ENSPKIG00000016172	rad54l	99	78.455	ENSMGAG00000010634	RAD54L	99	78.455	Meleagris_gallopavo
ENSPKIG00000016172	rad54l	99	76.851	ENSMAUG00000020076	Rad54l	99	76.851	Mesocricetus_auratus
ENSPKIG00000016172	rad54l	99	77.016	ENSMICG00000003266	RAD54L	99	77.016	Microcebus_murinus
ENSPKIG00000016172	rad54l	99	77.254	ENSMOCG00000001778	Rad54l	99	77.254	Microtus_ochrogaster
ENSPKIG00000016172	rad54l	99	75.372	ENSMALG00000021148	rad54l	99	75.372	Monopterus_albus
ENSPKIG00000016172	rad54l	99	73.228	MGP_CAROLIEiJ_G0026325	Rad54l	99	73.228	Mus_caroli
ENSPKIG00000016172	rad54l	99	76.747	ENSMUSG00000028702	Rad54l	99	76.747	Mus_musculus
ENSPKIG00000016172	rad54l	99	76.851	MGP_PahariEiJ_G0028657	Rad54l	99	76.851	Mus_pahari
ENSPKIG00000016172	rad54l	99	76.882	MGP_SPRETEiJ_G0027297	Rad54l	99	76.882	Mus_spretus
ENSPKIG00000016172	rad54l	99	76.478	ENSMPUG00000012883	RAD54L	99	76.478	Mustela_putorius_furo
ENSPKIG00000016172	rad54l	99	76.851	ENSMLUG00000003763	RAD54L	99	76.851	Myotis_lucifugus
ENSPKIG00000016172	rad54l	99	76.043	ENSNGAG00000024213	Rad54l	99	76.043	Nannospalax_galili
ENSPKIG00000016172	rad54l	99	75.806	ENSNLEG00000016548	RAD54L	99	75.806	Nomascus_leucogenys
ENSPKIG00000016172	rad54l	91	77.049	ENSMEUG00000006793	RAD54L	99	77.049	Notamacropus_eugenii
ENSPKIG00000016172	rad54l	90	79.298	ENSOPRG00000016016	RAD54L	90	79.298	Ochotona_princeps
ENSPKIG00000016172	rad54l	99	76.344	ENSODEG00000008519	RAD54L	99	76.344	Octodon_degus
ENSPKIG00000016172	rad54l	99	77.069	ENSONIG00000007659	rad54l	99	77.069	Oreochromis_niloticus
ENSPKIG00000016172	rad54l	99	76.882	ENSOCUG00000005229	RAD54L	99	76.882	Oryctolagus_cuniculus
ENSPKIG00000016172	rad54l	100	77.913	ENSORLG00000002958	rad54l	100	78.003	Oryzias_latipes
ENSPKIG00000016172	rad54l	99	78.184	ENSORLG00020006554	rad54l	98	81.818	Oryzias_latipes_hni
ENSPKIG00000016172	rad54l	100	78.273	ENSORLG00015002907	rad54l	100	78.003	Oryzias_latipes_hsok
ENSPKIG00000016172	rad54l	99	78.426	ENSOMEG00000007770	rad54l	99	78.426	Oryzias_melastigma
ENSPKIG00000016172	rad54l	99	76.676	ENSOARG00000002264	RAD54L	99	76.676	Ovis_aries
ENSPKIG00000016172	rad54l	99	76.344	ENSPPAG00000031222	RAD54L	99	76.344	Pan_paniscus
ENSPKIG00000016172	rad54l	99	76.344	ENSPPRG00000010317	RAD54L	99	76.344	Panthera_pardus
ENSPKIG00000016172	rad54l	99	76.344	ENSPTIG00000012200	RAD54L	99	76.344	Panthera_tigris_altaica
ENSPKIG00000016172	rad54l	99	76.210	ENSPTRG00000000689	RAD54L	99	76.210	Pan_troglodytes
ENSPKIG00000016172	rad54l	99	76.478	ENSPANG00000016295	RAD54L	99	76.478	Papio_anubis
ENSPKIG00000016172	rad54l	97	77.531	ENSPSIG00000003258	RAD54L	98	77.531	Pelodiscus_sinensis
ENSPKIG00000016172	rad54l	99	75.203	ENSPMGG00000016335	rad54l	99	75.203	Periophthalmus_magnuspinnatus
ENSPKIG00000016172	rad54l	99	76.851	ENSPEMG00000011422	Rad54l	99	76.851	Peromyscus_maniculatus_bairdii
ENSPKIG00000016172	rad54l	99	67.388	ENSPMAG00000007719	rad54l	99	67.388	Petromyzon_marinus
ENSPKIG00000016172	rad54l	99	77.733	ENSPCIG00000029032	RAD54L	99	77.733	Phascolarctos_cinereus
ENSPKIG00000016172	rad54l	86	80.253	ENSPFOG00000013732	rad54l	99	80.253	Poecilia_formosa
ENSPKIG00000016172	rad54l	82	78.990	ENSPLAG00000023416	rad54l	99	78.990	Poecilia_latipinna
ENSPKIG00000016172	rad54l	91	77.893	ENSPMEG00000008299	rad54l	100	77.893	Poecilia_mexicana
ENSPKIG00000016172	rad54l	99	77.069	ENSPREG00000019955	rad54l	99	77.069	Poecilia_reticulata
ENSPKIG00000016172	rad54l	99	64.430	ENSPPYG00000001398	RAD54L	99	64.430	Pongo_abelii
ENSPKIG00000016172	rad54l	79	79.126	ENSPCAG00000005323	RAD54L	80	79.126	Procavia_capensis
ENSPKIG00000016172	rad54l	99	76.478	ENSPCOG00000015423	RAD54L	99	76.478	Propithecus_coquereli
ENSPKIG00000016172	rad54l	99	74.696	ENSPNYG00000002942	rad54l	98	74.696	Pundamilia_nyererei
ENSPKIG00000016172	rad54l	99	79.268	ENSPNAG00000012483	rad54l	99	79.268	Pygocentrus_nattereri
ENSPKIG00000016172	rad54l	99	76.613	ENSRNOG00000013148	Rad54l	99	76.613	Rattus_norvegicus
ENSPKIG00000016172	rad54l	99	76.344	ENSRBIG00000043495	RAD54L	99	76.344	Rhinopithecus_bieti
ENSPKIG00000016172	rad54l	99	76.478	ENSRROG00000020844	RAD54L	99	76.478	Rhinopithecus_roxellana
ENSPKIG00000016172	rad54l	81	48.834	YGL163C	RAD54	71	48.989	Saccharomyces_cerevisiae
ENSPKIG00000016172	rad54l	99	76.747	ENSSBOG00000024672	RAD54L	99	76.747	Saimiri_boliviensis_boliviensis
ENSPKIG00000016172	rad54l	99	77.554	ENSSHAG00000000110	RAD54L	99	77.554	Sarcophilus_harrisii
ENSPKIG00000016172	rad54l	99	78.320	ENSSDUG00000019147	rad54l	99	78.320	Seriola_dumerili
ENSPKIG00000016172	rad54l	99	78.455	ENSSLDG00000012330	rad54l	99	78.455	Seriola_lalandi_dorsalis
ENSPKIG00000016172	rad54l	84	75.281	ENSSARG00000006689	RAD54L	100	75.281	Sorex_araneus
ENSPKIG00000016172	rad54l	99	78.620	ENSSPAG00000011016	rad54l	99	78.620	Stegastes_partitus
ENSPKIG00000016172	rad54l	99	76.478	ENSSSCG00000003905	RAD54L	99	76.478	Sus_scrofa
ENSPKIG00000016172	rad54l	99	78.226	ENSTGUG00000008233	RAD54L	99	78.360	Taeniopygia_guttata
ENSPKIG00000016172	rad54l	99	75.918	ENSTRUG00000008410	rad54l	99	75.646	Takifugu_rubripes
ENSPKIG00000016172	rad54l	99	75.341	ENSTNIG00000004716	rad54l	99	74.763	Tetraodon_nigroviridis
ENSPKIG00000016172	rad54l	99	71.409	ENSTTRG00000006315	RAD54L	99	71.409	Tursiops_truncatus
ENSPKIG00000016172	rad54l	99	76.590	ENSUAMG00000011824	RAD54L	99	76.590	Ursus_americanus
ENSPKIG00000016172	rad54l	99	75.372	ENSUMAG00000023603	RAD54L	99	75.372	Ursus_maritimus
ENSPKIG00000016172	rad54l	99	76.210	ENSVVUG00000007201	RAD54L	99	76.210	Vulpes_vulpes
ENSPKIG00000016172	rad54l	94	72.597	ENSXETG00000004369	rad54l	97	72.597	Xenopus_tropicalis
ENSPKIG00000016172	rad54l	55	75.123	ENSXCOG00000016028	rad54l	91	72.947	Xiphophorus_couchianus