EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000016244 (Gene tree)
Gene ID: -
Gene Symbol: zgc:171482
Alias: -
Full Name: zgc:171482
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Plus strand
Length: 4693 bases
Position: chrPGUA01000204.1:571108-575800
Accession: ZDB-GENE-080204-84
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000038500	zf-met	PF12874.7	7.3e-15	1	2
ENSPKIP00000038500	zf-met	PF12874.7	7.3e-15	2	2
ENSPKIP00000038500	zf-C2H2_jaz	PF12171.8	1.3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000019490	-	420	-	ENSPKIP00000038500	139 (aa)	-	-

Gene Model

Click here to download ENSPKIG00000016244's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000016244's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000016244	zgc:171482	88	65.854	ENSPKIG00000000048	zmat4a	65	72.477
ENSPKIG00000016244	zgc:171482	89	84.800	ENSPKIG00000015911	-	76	90.909
ENSPKIG00000016244	zgc:171482	90	67.200	ENSPKIG00000021792	zmat4b	72	72.477

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000016244	zgc:171482	86	83.333	ENSAPOG00000019970	zgc:171482	79	90.909	Acanthochromis_polyacanthus
ENSPKIG00000016244	zgc:171482	82	88.696	ENSACIG00000021512	zgc:171482	82	90.909	Amphilophus_citrinellus
ENSPKIG00000016244	zgc:171482	82	88.696	ENSAOCG00000000751	zgc:171482	81	90.909	Amphiprion_ocellaris
ENSPKIG00000016244	zgc:171482	86	83.333	ENSAPEG00000014154	zgc:171482	79	90.909	Amphiprion_percula
ENSPKIG00000016244	zgc:171482	82	88.696	ENSATEG00000001371	zgc:171482	79	90.909	Anabas_testudineus
ENSPKIG00000016244	zgc:171482	84	87.288	ENSACLG00000010511	zgc:171482	76	90.909	Astatotilapia_calliptera
ENSPKIG00000016244	zgc:171482	91	81.102	ENSAMXG00000002299	zgc:171482	83	90.000	Astyanax_mexicanus
ENSPKIG00000016244	zgc:171482	84	83.898	ENSCSEG00000006509	zgc:171482	72	89.091	Cynoglossus_semilaevis
ENSPKIG00000016244	zgc:171482	82	87.826	ENSCVAG00000013606	zgc:171482	80	90.000	Cyprinodon_variegatus
ENSPKIG00000016244	zgc:171482	94	79.545	ENSDARG00000074415	zgc:171482	82	88.182	Danio_rerio
ENSPKIG00000016244	zgc:171482	94	65.909	ENSELUG00000017517	-	60	82.222	Esox_lucius
ENSPKIG00000016244	zgc:171482	78	90.000	ENSELUG00000021817	zgc:171482	79	90.000	Esox_lucius
ENSPKIG00000016244	zgc:171482	98	78.832	ENSFHEG00000002233	zgc:171482	94	72.917	Fundulus_heteroclitus
ENSPKIG00000016244	zgc:171482	85	84.426	ENSGMOG00000010508	zgc:171482	79	89.091	Gadus_morhua
ENSPKIG00000016244	zgc:171482	87	85.246	ENSGAFG00000009398	zgc:171482	72	90.909	Gambusia_affinis
ENSPKIG00000016244	zgc:171482	84	87.288	ENSGACG00000007680	zgc:171482	80	90.909	Gasterosteus_aculeatus
ENSPKIG00000016244	zgc:171482	84	87.288	ENSHBUG00000023289	zgc:171482	83	90.909	Haplochromis_burtoni
ENSPKIG00000016244	zgc:171482	81	89.474	ENSHCOG00000018086	zgc:171482	83	90.991	Hippocampus_comes
ENSPKIG00000016244	zgc:171482	87	85.246	ENSIPUG00000000361	zgc:171482	80	90.000	Ictalurus_punctatus
ENSPKIG00000016244	zgc:171482	84	87.288	ENSKMAG00000005077	zgc:171482	68	90.909	Kryptolebias_marmoratus
ENSPKIG00000016244	zgc:171482	82	87.826	ENSLBEG00000023823	zgc:171482	79	90.000	Labrus_bergylta
ENSPKIG00000016244	zgc:171482	84	87.288	ENSLOCG00000008863	zgc:171482	77	90.000	Lepisosteus_oculatus
ENSPKIG00000016244	zgc:171482	95	77.206	ENSMAMG00000001031	zgc:171482	69	90.000	Mastacembelus_armatus
ENSPKIG00000016244	zgc:171482	88	82.400	ENSMZEG00005027721	zgc:171482	79	89.908	Maylandia_zebra
ENSPKIG00000016244	zgc:171482	82	88.696	ENSMMOG00000010523	zgc:171482	84	90.909	Mola_mola
ENSPKIG00000016244	zgc:171482	82	88.696	ENSMALG00000017883	zgc:171482	80	90.909	Monopterus_albus
ENSPKIG00000016244	zgc:171482	83	88.034	ENSNBRG00000021035	zgc:171482	82	90.909	Neolamprologus_brichardi
ENSPKIG00000016244	zgc:171482	91	81.679	ENSONIG00000018365	zgc:171482	78	90.909	Oreochromis_niloticus
ENSPKIG00000016244	zgc:171482	83	87.931	ENSORLG00000007607	zgc:171482	80	90.909	Oryzias_latipes
ENSPKIG00000016244	zgc:171482	82	87.826	ENSORLG00020003563	zgc:171482	80	88.991	Oryzias_latipes_hni
ENSPKIG00000016244	zgc:171482	83	87.931	ENSORLG00015008552	zgc:171482	80	90.909	Oryzias_latipes_hsok
ENSPKIG00000016244	zgc:171482	86	85.833	ENSOMEG00000003526	zgc:171482	77	90.909	Oryzias_melastigma
ENSPKIG00000016244	zgc:171482	82	88.696	ENSPLAG00000003327	zgc:171482	79	90.909	Poecilia_latipinna
ENSPKIG00000016244	zgc:171482	82	88.696	ENSPMEG00000004988	zgc:171482	79	87.156	Poecilia_mexicana
ENSPKIG00000016244	zgc:171482	82	88.696	ENSPREG00000019241	zgc:171482	80	90.909	Poecilia_reticulata
ENSPKIG00000016244	zgc:171482	84	87.288	ENSPNYG00000007773	zgc:171482	76	90.909	Pundamilia_nyererei
ENSPKIG00000016244	zgc:171482	82	86.957	ENSPNAG00000007619	zgc:171482	79	89.091	Pygocentrus_nattereri
ENSPKIG00000016244	zgc:171482	90	84.921	ENSSFOG00015021238	zgc:171482	74	91.818	Scleropages_formosus
ENSPKIG00000016244	zgc:171482	88	86.885	ENSSFOG00015016149	zgc:171482	88	90.826	Scleropages_formosus
ENSPKIG00000016244	zgc:171482	78	90.909	ENSSMAG00000002715	zgc:171482	71	90.909	Scophthalmus_maximus
ENSPKIG00000016244	zgc:171482	82	88.696	ENSSDUG00000008773	zgc:171482	77	90.909	Seriola_dumerili
ENSPKIG00000016244	zgc:171482	82	88.696	ENSSLDG00000019510	zgc:171482	77	90.909	Seriola_lalandi_dorsalis
ENSPKIG00000016244	zgc:171482	89	84.000	ENSSPAG00000013724	zgc:171482	87	90.909	Stegastes_partitus
ENSPKIG00000016244	zgc:171482	83	86.207	ENSTRUG00000005705	zgc:171482	65	89.091	Takifugu_rubripes
ENSPKIG00000016244	zgc:171482	83	66.379	ENSTNIG00000008679	zgc:171482	80	68.182	Tetraodon_nigroviridis
ENSPKIG00000016244	zgc:171482	75	81.481	ENSXETG00000013525	zmat4	69	90.698	Xenopus_tropicalis
ENSPKIG00000016244	zgc:171482	87	80.992	ENSXMAG00000002641	zgc:171482	71	86.239	Xiphophorus_maculatus