EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000016304 (Gene tree)
Gene ID: 111842945
Gene Symbol: vars
Alias: -
Full Name: valyl-tRNA synthetase
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Plus strand
Length: 13203 bases
Position: chrPGUA01000097.1:1847023-1860225
Accession: 111842945
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000038598	tRNA-synt_1g	PF09334.11	1.5e-11	1	1
ENSPKIP00000038633	tRNA-synt_1g	PF09334.11	1.5e-11	1	1
ENSPKIP00000038703	tRNA-synt_1g	PF09334.11	1.4e-10	1	1
ENSPKIP00000038703	Anticodon_1	PF08264.13	2e-34	1	1
ENSPKIP00000038598	Anticodon_1	PF08264.13	4.7e-34	1	1
ENSPKIP00000038633	Anticodon_1	PF08264.13	4.7e-34	1	1
ENSPKIP00000038598	tRNA-synt_1	PF00133.22	4e-203	1	1
ENSPKIP00000038633	tRNA-synt_1	PF00133.22	4.3e-203	1	1
ENSPKIP00000038703	tRNA-synt_1	PF00133.22	1.4e-201	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000019697	-	3654	-	ENSPKIP00000038703	1217 (aa)	-	-
ENSPKIT00000019627	-	3867	-	ENSPKIP00000038633	1286 (aa)	-	-
ENSPKIT00000019591	-	3840	-	ENSPKIP00000038598	1277 (aa)	XP_023665874	UPI000CD5D55F

Gene Model

Click here to download ENSPKIG00000016304's gene model file

Pathways

Pathway ID	Pathway Name	Source
pki00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000016304's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000016304	vars	84	49.031	ENSPKIG00000011372	vars2	92	50.552

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000016304	vars	100	63.861	ENSG00000204394	VARS	99	70.859	Homo_sapiens
ENSPKIG00000016304	vars	98	77.358	ENSAPOG00000020691	vars	96	81.023	Acanthochromis_polyacanthus
ENSPKIG00000016304	vars	98	77.358	ENSAPOG00000020921	vars	96	81.023	Acanthochromis_polyacanthus
ENSPKIG00000016304	vars	100	63.657	ENSAMEG00000006417	VARS	100	63.657	Ailuropoda_melanoleuca
ENSPKIG00000016304	vars	100	80.264	ENSACIG00000013752	vars	100	80.264	Amphilophus_citrinellus
ENSPKIG00000016304	vars	100	81.620	ENSAOCG00000002447	vars	99	81.620	Amphiprion_ocellaris
ENSPKIG00000016304	vars	100	81.542	ENSAPEG00000010638	vars	99	81.542	Amphiprion_percula
ENSPKIG00000016304	vars	100	77.933	ENSATEG00000020219	vars	100	77.933	Anabas_testudineus
ENSPKIG00000016304	vars	90	71.924	ENSACAG00000029133	-	99	71.924	Anolis_carolinensis
ENSPKIG00000016304	vars	100	63.861	ENSANAG00000015453	VARS	100	63.369	Aotus_nancymaae
ENSPKIG00000016304	vars	100	81.323	ENSACLG00000025699	vars	97	81.323	Astatotilapia_calliptera
ENSPKIG00000016304	vars	94	79.795	ENSAMXG00000017716	vars	95	79.795	Astyanax_mexicanus
ENSPKIG00000016304	vars	100	63.784	ENSBTAG00000005631	VARS	100	63.784	Bos_taurus
ENSPKIG00000016304	vars	100	63.861	ENSCJAG00000002604	VARS	100	63.861	Callithrix_jacchus
ENSPKIG00000016304	vars	100	63.580	ENSCAFG00000000636	VARS	100	63.580	Canis_familiaris
ENSPKIG00000016304	vars	94	64.885	ENSCAFG00020020790	VARS	96	64.885	Canis_lupus_dingo
ENSPKIG00000016304	vars	100	63.784	ENSCHIG00000011008	VARS	96	68.432	Capra_hircus
ENSPKIG00000016304	vars	100	63.552	ENSTSYG00000001567	VARS	100	63.552	Carlito_syrichta
ENSPKIG00000016304	vars	90	67.296	ENSCAPG00000013736	VARS	98	67.068	Cavia_aperea
ENSPKIG00000016304	vars	100	63.608	ENSCPOG00000000870	VARS	100	63.320	Cavia_porcellus
ENSPKIG00000016304	vars	100	63.938	ENSCCAG00000035656	VARS	100	63.784	Cebus_capucinus
ENSPKIG00000016304	vars	100	64.170	ENSCATG00000022394	VARS	100	64.015	Cercocebus_atys
ENSPKIG00000016304	vars	93	63.072	ENSCLAG00000009470	VARS	92	64.791	Chinchilla_lanigera
ENSPKIG00000016304	vars	100	64.093	ENSCSAG00000008784	VARS	100	63.938	Chlorocebus_sabaeus
ENSPKIG00000016304	vars	81	73.776	ENSCPBG00000007943	VARS	96	73.926	Chrysemys_picta_bellii
ENSPKIG00000016304	vars	100	64.247	ENSCANG00000033570	VARS	100	64.093	Colobus_angolensis_palliatus
ENSPKIG00000016304	vars	100	63.320	ENSCGRG00001005686	Vars	100	63.398	Cricetulus_griseus_chok1gshd
ENSPKIG00000016304	vars	93	61.388	ENSCGRG00000013352	Vars	78	61.633	Cricetulus_griseus_crigri
ENSPKIG00000016304	vars	100	76.732	ENSCSEG00000019652	vars	100	76.965	Cynoglossus_semilaevis
ENSPKIG00000016304	vars	100	81.167	ENSCVAG00000022398	vars	100	81.167	Cyprinodon_variegatus
ENSPKIG00000016304	vars	100	81.109	ENSDARG00000044575	vars	100	81.187	Danio_rerio
ENSPKIG00000016304	vars	86	68.685	ENSDORG00000016433	Vars	94	68.685	Dipodomys_ordii
ENSPKIG00000016304	vars	69	73.237	ENSETEG00000003824	VARS	77	73.237	Echinops_telfairi
ENSPKIG00000016304	vars	60	62.842	ENSEBUG00000004637	vars	100	63.201	Eptatretus_burgeri
ENSPKIG00000016304	vars	100	63.784	ENSEASG00005015673	VARS	100	63.369	Equus_asinus_asinus
ENSPKIG00000016304	vars	100	63.966	ENSECAG00000014620	VARS	100	63.966	Equus_caballus
ENSPKIG00000016304	vars	83	69.000	ENSEEUG00000004116	VARS	83	69.000	Erinaceus_europaeus
ENSPKIG00000016304	vars	100	81.882	ENSELUG00000006550	vars	97	81.882	Esox_lucius
ENSPKIG00000016304	vars	100	63.784	ENSFCAG00000004510	VARS	100	63.784	Felis_catus
ENSPKIG00000016304	vars	83	69.093	ENSFDAG00000011401	VARS	100	69.100	Fukomys_damarensis
ENSPKIG00000016304	vars	100	80.156	ENSFHEG00000010672	vars	100	80.467	Fundulus_heteroclitus
ENSPKIG00000016304	vars	100	77.856	ENSGMOG00000014908	vars	100	78.220	Gadus_morhua
ENSPKIG00000016304	vars	100	80.000	ENSGAFG00000021630	vars	100	80.000	Gambusia_affinis
ENSPKIG00000016304	vars	100	79.421	ENSGACG00000009601	vars	100	79.421	Gasterosteus_aculeatus
ENSPKIG00000016304	vars	50	55.039	ENSGAGG00000006508	-	91	57.829	Gopherus_agassizii
ENSPKIG00000016304	vars	100	64.170	ENSGGOG00000011364	VARS	100	64.015	Gorilla_gorilla
ENSPKIG00000016304	vars	100	81.556	ENSHBUG00000017151	vars	97	81.556	Haplochromis_burtoni
ENSPKIG00000016304	vars	100	63.320	ENSHGLG00000011646	VARS	100	63.320	Heterocephalus_glaber_female
ENSPKIG00000016304	vars	95	59.319	ENSHGLG00100018062	VARS	100	59.319	Heterocephalus_glaber_male
ENSPKIG00000016304	vars	99	77.163	ENSHCOG00000012198	vars	99	77.397	Hippocampus_comes
ENSPKIG00000016304	vars	100	81.981	ENSIPUG00000005218	vars	100	81.825	Ictalurus_punctatus
ENSPKIG00000016304	vars	100	63.475	ENSSTOG00000013112	VARS	100	63.398	Ictidomys_tridecemlineatus
ENSPKIG00000016304	vars	100	63.186	ENSJJAG00000019749	-	100	63.186	Jaculus_jaculus
ENSPKIG00000016304	vars	100	52.106	ENSJJAG00000015343	-	100	51.835	Jaculus_jaculus
ENSPKIG00000016304	vars	100	78.660	ENSKMAG00000009455	vars	100	78.894	Kryptolebias_marmoratus
ENSPKIG00000016304	vars	100	78.337	ENSLBEG00000010341	vars	100	77.456	Labrus_bergylta
ENSPKIG00000016304	vars	94	65.554	ENSLACG00000015232	VARS	99	66.070	Latimeria_chalumnae
ENSPKIG00000016304	vars	100	73.359	ENSLOCG00000004240	vars	100	73.750	Lepisosteus_oculatus
ENSPKIG00000016304	vars	100	63.833	ENSLAFG00000023090	VARS	100	63.833	Loxodonta_africana
ENSPKIG00000016304	vars	100	64.093	ENSMFAG00000001032	VARS	100	63.938	Macaca_fascicularis
ENSPKIG00000016304	vars	100	64.093	ENSMMUG00000006828	VARS	100	63.938	Macaca_mulatta
ENSPKIG00000016304	vars	100	64.093	ENSMNEG00000042072	VARS	100	63.938	Macaca_nemestrina
ENSPKIG00000016304	vars	100	64.170	ENSMLEG00000039307	VARS	100	64.015	Mandrillus_leucophaeus
ENSPKIG00000016304	vars	100	81.386	ENSMAMG00000003949	vars	100	81.464	Mastacembelus_armatus
ENSPKIG00000016304	vars	100	81.401	ENSMZEG00005018327	vars	97	81.401	Maylandia_zebra
ENSPKIG00000016304	vars	100	63.166	ENSMAUG00000006715	Vars	100	63.243	Mesocricetus_auratus
ENSPKIG00000016304	vars	100	63.287	ENSMICG00000003548	VARS	100	63.134	Microcebus_murinus
ENSPKIG00000016304	vars	100	63.571	ENSMOCG00000015404	Vars	100	63.651	Microtus_ochrogaster
ENSPKIG00000016304	vars	100	78.288	ENSMMOG00000015801	vars	100	78.132	Mola_mola
ENSPKIG00000016304	vars	100	64.253	ENSMODG00000015204	-	100	64.093	Monodelphis_domestica
ENSPKIG00000016304	vars	99	80.841	ENSMALG00000022532	vars	99	80.841	Monopterus_albus
ENSPKIG00000016304	vars	100	64.065	MGP_CAROLIEiJ_G0021491	Vars	100	64.065	Mus_caroli
ENSPKIG00000016304	vars	100	63.988	ENSMUSG00000007029	Vars	100	63.988	Mus_musculus
ENSPKIG00000016304	vars	100	64.065	MGP_PahariEiJ_G0020486	Vars	100	64.065	Mus_pahari
ENSPKIG00000016304	vars	100	64.065	MGP_SPRETEiJ_G0022396	Vars	100	64.065	Mus_spretus
ENSPKIG00000016304	vars	100	63.552	ENSMPUG00000010821	VARS	100	63.552	Mustela_putorius_furo
ENSPKIG00000016304	vars	78	65.647	ENSMLUG00000013126	VARS	100	65.350	Myotis_lucifugus
ENSPKIG00000016304	vars	100	64.374	ENSNGAG00000012151	Vars	100	64.374	Nannospalax_galili
ENSPKIG00000016304	vars	100	81.167	ENSNBRG00000020520	vars	100	81.167	Neolamprologus_brichardi
ENSPKIG00000016304	vars	100	64.015	ENSNLEG00000006351	VARS	100	64.015	Nomascus_leucogenys
ENSPKIG00000016304	vars	94	71.764	ENSMEUG00000011378	VARS	95	71.859	Notamacropus_eugenii
ENSPKIG00000016304	vars	100	63.707	ENSOPRG00000003607	VARS	100	63.784	Ochotona_princeps
ENSPKIG00000016304	vars	100	62.674	ENSODEG00000017681	VARS	100	62.597	Octodon_degus
ENSPKIG00000016304	vars	100	80.868	ENSONIG00000013064	vars	99	83.564	Oreochromis_niloticus
ENSPKIG00000016304	vars	77	65.728	ENSOANG00000005400	VARS	98	65.647	Ornithorhynchus_anatinus
ENSPKIG00000016304	vars	100	62.828	ENSOCUG00000022463	VARS	94	71.865	Oryctolagus_cuniculus
ENSPKIG00000016304	vars	100	80.934	ENSORLG00000013063	vars	100	81.104	Oryzias_latipes
ENSPKIG00000016304	vars	100	81.308	ENSORLG00020003504	vars	100	81.464	Oryzias_latipes_hni
ENSPKIG00000016304	vars	100	81.308	ENSORLG00015009001	vars	100	81.464	Oryzias_latipes_hsok
ENSPKIG00000016304	vars	100	81.386	ENSOMEG00000015016	vars	100	81.386	Oryzias_melastigma
ENSPKIG00000016304	vars	100	63.475	ENSOGAG00000007515	VARS	100	63.320	Otolemur_garnettii
ENSPKIG00000016304	vars	100	63.861	ENSPPAG00000034012	VARS	100	63.861	Pan_paniscus
ENSPKIG00000016304	vars	100	63.938	ENSPPRG00000014855	VARS	100	63.938	Panthera_pardus
ENSPKIG00000016304	vars	86	67.609	ENSPTIG00000010462	VARS	95	66.875	Panthera_tigris_altaica
ENSPKIG00000016304	vars	100	63.861	ENSPTRG00000017985	VARS	100	63.861	Pan_troglodytes
ENSPKIG00000016304	vars	100	62.625	ENSPANG00000014565	VARS	100	62.471	Papio_anubis
ENSPKIG00000016304	vars	100	78.115	ENSPMGG00000023909	vars	100	78.349	Periophthalmus_magnuspinnatus
ENSPKIG00000016304	vars	100	63.398	ENSPEMG00000006639	Vars	100	63.475	Peromyscus_maniculatus_bairdii
ENSPKIG00000016304	vars	100	63.713	ENSPCIG00000018553	VARS	100	63.552	Phascolarctos_cinereus
ENSPKIG00000016304	vars	100	80.311	ENSPFOG00000015690	vars	100	80.311	Poecilia_formosa
ENSPKIG00000016304	vars	100	80.233	ENSPLAG00000009590	vars	100	80.233	Poecilia_latipinna
ENSPKIG00000016304	vars	100	80.311	ENSPMEG00000004708	vars	100	80.311	Poecilia_mexicana
ENSPKIG00000016304	vars	95	85.729	ENSPREG00000013264	vars	99	85.729	Poecilia_reticulata
ENSPKIG00000016304	vars	100	62.548	ENSPPYG00000016460	VARS	100	62.394	Pongo_abelii
ENSPKIG00000016304	vars	86	66.607	ENSPCAG00000013565	VARS	86	66.607	Procavia_capensis
ENSPKIG00000016304	vars	100	63.503	ENSPCOG00000010942	VARS	100	63.503	Propithecus_coquereli
ENSPKIG00000016304	vars	94	68.845	ENSPVAG00000012403	VARS	87	71.254	Pteropus_vampyrus
ENSPKIG00000016304	vars	100	81.479	ENSPNYG00000022511	vars	100	81.479	Pundamilia_nyererei
ENSPKIG00000016304	vars	100	82.243	ENSPNAG00000020962	vars	100	82.087	Pygocentrus_nattereri
ENSPKIG00000016304	vars	100	64.015	ENSRNOG00000000867	Vars	100	64.015	Rattus_norvegicus
ENSPKIG00000016304	vars	100	64.170	ENSRBIG00000041669	VARS	100	64.015	Rhinopithecus_bieti
ENSPKIG00000016304	vars	100	64.170	ENSRROG00000045490	VARS	100	64.015	Rhinopithecus_roxellana
ENSPKIG00000016304	vars	100	63.784	ENSSBOG00000035402	VARS	100	63.784	Saimiri_boliviensis_boliviensis
ENSPKIG00000016304	vars	100	62.844	ENSSHAG00000006937	VARS	100	62.977	Sarcophilus_harrisii
ENSPKIG00000016304	vars	100	83.997	ENSSFOG00015014272	vars	100	88.110	Scleropages_formosus
ENSPKIG00000016304	vars	100	79.907	ENSSMAG00000009596	vars	99	79.984	Scophthalmus_maximus
ENSPKIG00000016304	vars	100	82.087	ENSSDUG00000014177	vars	100	82.087	Seriola_dumerili
ENSPKIG00000016304	vars	100	81.854	ENSSLDG00000025316	vars	100	81.854	Seriola_lalandi_dorsalis
ENSPKIG00000016304	vars	100	81.620	ENSSPAG00000017068	vars	100	81.620	Stegastes_partitus
ENSPKIG00000016304	vars	100	63.657	ENSSSCG00000038950	VARS	100	63.657	Sus_scrofa
ENSPKIG00000016304	vars	82	76.168	ENSTRUG00000012307	vars	97	75.928	Takifugu_rubripes
ENSPKIG00000016304	vars	100	79.393	ENSTNIG00000008011	vars	100	79.393	Tetraodon_nigroviridis
ENSPKIG00000016304	vars	100	58.069	ENSTTRG00000014128	VARS	95	66.599	Tursiops_truncatus
ENSPKIG00000016304	vars	100	62.394	ENSUAMG00000010424	VARS	100	62.519	Ursus_americanus
ENSPKIG00000016304	vars	100	58.964	ENSUMAG00000013486	VARS	100	59.119	Ursus_maritimus
ENSPKIG00000016304	vars	100	63.945	ENSVVUG00000021323	VARS	100	63.608	Vulpes_vulpes
ENSPKIG00000016304	vars	100	64.093	ENSXETG00000024076	vars	100	63.938	Xenopus_tropicalis
ENSPKIG00000016304	vars	100	78.444	ENSXCOG00000019172	vars	100	78.444	Xiphophorus_couchianus
ENSPKIG00000016304	vars	100	80.156	ENSXMAG00000010927	vars	100	80.156	Xiphophorus_maculatus