EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPKIG00000016325 (Gene tree)
Gene ID: 111843718
Gene Symbol: POP1
Alias: -
Full Name: POP1 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Plus strand
Length: 11573 bases
Position: chrPGUA01000002.1:2631636-2643208
Accession: 111843718
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000038623	POP1	PF06978.11	2.7e-37	1	2
ENSPKIP00000038623	POP1	PF06978.11	2.7e-37	2	2
ENSPKIP00000038623	POPLD	PF08170.12	1.6e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000019617	POP1-201	5642	-	ENSPKIP00000038623	972 (aa)	XP_023667281	UPI000CD5FFD8

Gene Model

Click here to download ENSPKIG00000016325's gene model file

Pathways

Pathway ID	Pathway Name	Source
pki03008	Ribosome biogenesis in eukaryotes	KEGG
pki03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000016325's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000016325	POP1	100	48.848	ENSG00000104356	POP1	100	49.425	Homo_sapiens
ENSPKIG00000016325	POP1	100	59.540	ENSAPOG00000008198	pop1	100	58.900	Acanthochromis_polyacanthus
ENSPKIG00000016325	POP1	100	49.759	ENSAMEG00000000556	POP1	100	49.759	Ailuropoda_melanoleuca
ENSPKIG00000016325	POP1	100	57.688	ENSACIG00000004169	POP1	100	57.387	Amphilophus_citrinellus
ENSPKIG00000016325	POP1	100	58.818	ENSAOCG00000010991	pop1	100	58.659	Amphiprion_ocellaris
ENSPKIG00000016325	POP1	100	55.434	ENSAPEG00000007607	pop1	100	55.135	Amphiprion_percula
ENSPKIG00000016325	POP1	100	58.556	ENSATEG00000024814	POP1	100	58.524	Anabas_testudineus
ENSPKIG00000016325	POP1	93	52.114	ENSAPLG00000014418	POP1	99	52.270	Anas_platyrhynchos
ENSPKIG00000016325	POP1	99	48.242	ENSACAG00000016083	POP1	100	48.555	Anolis_carolinensis
ENSPKIG00000016325	POP1	88	56.757	ENSANAG00000026360	POP1	100	57.057	Aotus_nancymaae
ENSPKIG00000016325	POP1	100	58.806	ENSACLG00000010951	pop1	100	57.947	Astatotilapia_calliptera
ENSPKIG00000016325	POP1	100	55.005	ENSAMXG00000014483	POP1	100	55.199	Astyanax_mexicanus
ENSPKIG00000016325	POP1	95	53.589	ENSBTAG00000012596	POP1	100	49.806	Bos_taurus
ENSPKIG00000016325	POP1	100	49.372	ENSCJAG00000015567	POP1	100	49.614	Callithrix_jacchus
ENSPKIG00000016325	POP1	100	50.690	ENSCAFG00000000469	POP1	100	50.690	Canis_familiaris
ENSPKIG00000016325	POP1	100	49.326	ENSCAFG00020026765	POP1	100	49.326	Canis_lupus_dingo
ENSPKIG00000016325	POP1	100	49.282	ENSTSYG00000003097	POP1	100	49.282	Carlito_syrichta
ENSPKIG00000016325	POP1	99	49.135	ENSCAPG00000007251	POP1	99	49.135	Cavia_aperea
ENSPKIG00000016325	POP1	99	50.097	ENSCPOG00000002901	POP1	99	50.097	Cavia_porcellus
ENSPKIG00000016325	POP1	100	49.565	ENSCCAG00000018939	POP1	100	49.565	Cebus_capucinus
ENSPKIG00000016325	POP1	100	48.946	ENSCATG00000040916	POP1	100	49.042	Cercocebus_atys
ENSPKIG00000016325	POP1	100	48.612	ENSCLAG00000007208	POP1	97	48.853	Chinchilla_lanigera
ENSPKIG00000016325	POP1	91	50.000	ENSCSAG00000012340	POP1	99	50.478	Chlorocebus_sabaeus
ENSPKIG00000016325	POP1	92	50.158	ENSCHOG00000011432	POP1	95	50.158	Choloepus_hoffmanni
ENSPKIG00000016325	POP1	100	51.024	ENSCPBG00000006373	POP1	100	51.124	Chrysemys_picta_bellii
ENSPKIG00000016325	POP1	82	35.769	ENSCING00000008323	-	89	32.955	Ciona_intestinalis
ENSPKIG00000016325	POP1	100	48.851	ENSCANG00000001647	POP1	100	48.522	Colobus_angolensis_palliatus
ENSPKIG00000016325	POP1	100	49.029	ENSCGRG00001017308	Pop1	100	49.029	Cricetulus_griseus_chok1gshd
ENSPKIG00000016325	POP1	100	46.214	ENSCGRG00000010824	Pop1	100	46.214	Cricetulus_griseus_crigri
ENSPKIG00000016325	POP1	100	56.548	ENSCSEG00000008737	POP1	100	56.052	Cynoglossus_semilaevis
ENSPKIG00000016325	POP1	100	57.490	ENSCVAG00000022248	pop1	100	57.490	Cyprinodon_variegatus
ENSPKIG00000016325	POP1	53	52.713	ENSDARG00000102087	pop1	99	52.326	Danio_rerio
ENSPKIG00000016325	POP1	100	47.180	ENSDNOG00000019974	POP1	100	47.368	Dasypus_novemcinctus
ENSPKIG00000016325	POP1	100	42.706	ENSDORG00000015384	Pop1	100	42.131	Dipodomys_ordii
ENSPKIG00000016325	POP1	88	46.416	ENSETEG00000007839	POP1	88	46.075	Echinops_telfairi
ENSPKIG00000016325	POP1	53	45.889	ENSEBUG00000009897	pop1	97	45.315	Eptatretus_burgeri
ENSPKIG00000016325	POP1	100	50.338	ENSEASG00005003189	POP1	98	50.242	Equus_asinus_asinus
ENSPKIG00000016325	POP1	100	50.289	ENSECAG00000024236	POP1	100	50.339	Equus_caballus
ENSPKIG00000016325	POP1	50	72.727	ENSEEUG00000003050	-	52	77.049	Erinaceus_europaeus
ENSPKIG00000016325	POP1	100	62.121	ENSELUG00000003526	pop1	99	61.842	Esox_lucius
ENSPKIG00000016325	POP1	100	49.183	ENSFCAG00000002168	POP1	100	49.228	Felis_catus
ENSPKIG00000016325	POP1	100	47.876	ENSFALG00000005711	POP1	100	48.263	Ficedula_albicollis
ENSPKIG00000016325	POP1	100	48.944	ENSFDAG00000017068	POP1	100	48.944	Fukomys_damarensis
ENSPKIG00000016325	POP1	100	57.958	ENSFHEG00000019518	pop1	100	57.958	Fundulus_heteroclitus
ENSPKIG00000016325	POP1	100	55.279	ENSGMOG00000000659	POP1	100	55.600	Gadus_morhua
ENSPKIG00000016325	POP1	100	58.418	ENSGAFG00000019770	POP1	100	58.519	Gambusia_affinis
ENSPKIG00000016325	POP1	100	55.651	ENSGACG00000003499	pop1	100	55.182	Gasterosteus_aculeatus
ENSPKIG00000016325	POP1	100	49.661	ENSGAGG00000011737	POP1	98	50.243	Gopherus_agassizii
ENSPKIG00000016325	POP1	100	49.521	ENSGGOG00000003176	POP1	100	49.521	Gorilla_gorilla
ENSPKIG00000016325	POP1	100	58.644	ENSHBUG00000021583	pop1	100	58.243	Haplochromis_burtoni
ENSPKIG00000016325	POP1	100	48.806	ENSHGLG00000006029	POP1	100	48.944	Heterocephalus_glaber_female
ENSPKIG00000016325	POP1	100	48.806	ENSHGLG00100016879	POP1	100	48.944	Heterocephalus_glaber_male
ENSPKIG00000016325	POP1	100	54.025	ENSHCOG00000013888	pop1	100	53.988	Hippocampus_comes
ENSPKIG00000016325	POP1	100	54.203	ENSIPUG00000018336	pop1	100	54.211	Ictalurus_punctatus
ENSPKIG00000016325	POP1	100	49.328	ENSSTOG00000011455	POP1	97	49.424	Ictidomys_tridecemlineatus
ENSPKIG00000016325	POP1	100	47.984	ENSJJAG00000013325	Pop1	100	48.083	Jaculus_jaculus
ENSPKIG00000016325	POP1	100	59.592	ENSKMAG00000001346	POP1	100	59.490	Kryptolebias_marmoratus
ENSPKIG00000016325	POP1	100	55.197	ENSLBEG00000024457	POP1	100	54.894	Labrus_bergylta
ENSPKIG00000016325	POP1	93	51.663	ENSLACG00000012498	POP1	98	52.079	Latimeria_chalumnae
ENSPKIG00000016325	POP1	100	59.299	ENSLOCG00000009817	POP1	100	59.610	Lepisosteus_oculatus
ENSPKIG00000016325	POP1	100	50.673	ENSLAFG00000010770	POP1	100	50.865	Loxodonta_africana
ENSPKIG00000016325	POP1	100	48.946	ENSMFAG00000000347	POP1	100	49.042	Macaca_fascicularis
ENSPKIG00000016325	POP1	100	48.802	ENSMNEG00000036870	POP1	100	48.897	Macaca_nemestrina
ENSPKIG00000016325	POP1	100	48.946	ENSMLEG00000034986	POP1	100	49.042	Mandrillus_leucophaeus
ENSPKIG00000016325	POP1	100	58.350	ENSMAMG00000004040	pop1	100	58.250	Mastacembelus_armatus
ENSPKIG00000016325	POP1	100	58.424	ENSMZEG00005025448	pop1	100	57.947	Maylandia_zebra
ENSPKIG00000016325	POP1	100	46.469	ENSMGAG00000012167	POP1	100	47.328	Meleagris_gallopavo
ENSPKIG00000016325	POP1	100	49.611	ENSMAUG00000017537	Pop1	100	49.611	Mesocricetus_auratus
ENSPKIG00000016325	POP1	100	50.000	ENSMICG00000004361	POP1	100	50.000	Microcebus_murinus
ENSPKIG00000016325	POP1	100	49.370	ENSMOCG00000006356	Pop1	100	50.000	Microtus_ochrogaster
ENSPKIG00000016325	POP1	100	55.930	ENSMMOG00000018242	pop1	100	55.225	Mola_mola
ENSPKIG00000016325	POP1	99	48.615	ENSMODG00000006561	POP1	99	48.325	Monodelphis_domestica
ENSPKIG00000016325	POP1	100	57.515	ENSMALG00000012621	POP1	100	57.415	Monopterus_albus
ENSPKIG00000016325	POP1	100	48.604	MGP_CAROLIEiJ_G0019726	Pop1	100	48.505	Mus_caroli
ENSPKIG00000016325	POP1	100	48.123	ENSMUSG00000022325	Pop1	100	48.023	Mus_musculus
ENSPKIG00000016325	POP1	100	49.808	MGP_PahariEiJ_G0019735	Pop1	100	49.614	Mus_pahari
ENSPKIG00000016325	POP1	100	48.219	MGP_SPRETEiJ_G0020622	Pop1	100	48.120	Mus_spretus
ENSPKIG00000016325	POP1	100	48.797	ENSMPUG00000015250	POP1	100	48.797	Mustela_putorius_furo
ENSPKIG00000016325	POP1	100	48.216	ENSMLUG00000010204	POP1	100	48.359	Myotis_lucifugus
ENSPKIG00000016325	POP1	100	49.422	ENSNGAG00000001582	Pop1	100	49.567	Nannospalax_galili
ENSPKIG00000016325	POP1	100	55.511	ENSNBRG00000002356	pop1	100	54.771	Neolamprologus_brichardi
ENSPKIG00000016325	POP1	100	49.425	ENSNLEG00000002541	POP1	100	49.425	Nomascus_leucogenys
ENSPKIG00000016325	POP1	85	60.436	ENSMEUG00000003118	POP1	88	60.991	Notamacropus_eugenii
ENSPKIG00000016325	POP1	100	48.934	ENSOPRG00000007667	POP1	100	48.934	Ochotona_princeps
ENSPKIG00000016325	POP1	100	48.895	ENSODEG00000003984	POP1	100	49.664	Octodon_degus
ENSPKIG00000016325	POP1	100	59.109	ENSONIG00000016445	pop1	100	58.607	Oreochromis_niloticus
ENSPKIG00000016325	POP1	61	47.535	ENSOANG00000001278	-	94	48.780	Ornithorhynchus_anatinus
ENSPKIG00000016325	POP1	100	48.099	ENSOCUG00000017400	POP1	100	47.950	Oryctolagus_cuniculus
ENSPKIG00000016325	POP1	100	59.169	ENSORLG00000002839	pop1	100	59.263	Oryzias_latipes
ENSPKIG00000016325	POP1	91	58.306	ENSORLG00020022450	POP1	96	58.561	Oryzias_latipes_hni
ENSPKIG00000016325	POP1	100	59.289	ENSORLG00015012746	POP1	100	58.901	Oryzias_latipes_hsok
ENSPKIG00000016325	POP1	100	59.054	ENSOMEG00000006915	pop1	99	59.470	Oryzias_melastigma
ENSPKIG00000016325	POP1	100	48.895	ENSOGAG00000001466	POP1	100	49.183	Otolemur_garnettii
ENSPKIG00000016325	POP1	100	48.944	ENSPPAG00000018410	POP1	100	49.521	Pan_paniscus
ENSPKIG00000016325	POP1	100	49.040	ENSPPRG00000005002	POP1	100	49.040	Panthera_pardus
ENSPKIG00000016325	POP1	100	49.232	ENSPTIG00000016527	POP1	100	49.277	Panthera_tigris_altaica
ENSPKIG00000016325	POP1	100	49.040	ENSPTRG00000020458	POP1	100	49.617	Pan_troglodytes
ENSPKIG00000016325	POP1	100	49.138	ENSPANG00000009704	POP1	100	49.234	Papio_anubis
ENSPKIG00000016325	POP1	100	48.893	ENSPSIG00000012343	POP1	100	49.278	Pelodiscus_sinensis
ENSPKIG00000016325	POP1	100	53.113	ENSPMGG00000022253	POP1	100	53.210	Periophthalmus_magnuspinnatus
ENSPKIG00000016325	POP1	99	48.760	ENSPEMG00000023633	Pop1	100	48.760	Peromyscus_maniculatus_bairdii
ENSPKIG00000016325	POP1	91	43.704	ENSPMAG00000003209	POP1	100	44.008	Petromyzon_marinus
ENSPKIG00000016325	POP1	99	48.282	ENSPCIG00000012216	POP1	99	48.282	Phascolarctos_cinereus
ENSPKIG00000016325	POP1	100	59.123	ENSPFOG00000012490	POP1	100	59.123	Poecilia_formosa
ENSPKIG00000016325	POP1	100	58.938	ENSPLAG00000004646	POP1	100	59.040	Poecilia_latipinna
ENSPKIG00000016325	POP1	100	59.346	ENSPMEG00000019592	POP1	100	59.448	Poecilia_mexicana
ENSPKIG00000016325	POP1	100	59.451	ENSPREG00000020951	POP1	100	59.451	Poecilia_reticulata
ENSPKIG00000016325	POP1	100	49.234	ENSPPYG00000018777	POP1	100	49.234	Pongo_abelii
ENSPKIG00000016325	POP1	100	47.931	ENSPCAG00000016662	POP1	100	47.931	Procavia_capensis
ENSPKIG00000016325	POP1	100	49.712	ENSPCOG00000019420	POP1	100	49.712	Propithecus_coquereli
ENSPKIG00000016325	POP1	100	49.133	ENSPVAG00000014468	POP1	100	49.516	Pteropus_vampyrus
ENSPKIG00000016325	POP1	100	56.064	ENSPNYG00000004476	pop1	100	55.279	Pundamilia_nyererei
ENSPKIG00000016325	POP1	100	55.620	ENSPNAG00000000265	pop1	100	55.717	Pygocentrus_nattereri
ENSPKIG00000016325	POP1	100	48.502	ENSRNOG00000005243	Pop1	100	48.502	Rattus_norvegicus
ENSPKIG00000016325	POP1	100	49.138	ENSRBIG00000007996	POP1	100	49.138	Rhinopithecus_bieti
ENSPKIG00000016325	POP1	100	49.042	ENSRROG00000012334	POP1	100	49.042	Rhinopithecus_roxellana
ENSPKIG00000016325	POP1	99	49.419	ENSSBOG00000020830	POP1	100	49.516	Saimiri_boliviensis_boliviensis
ENSPKIG00000016325	POP1	99	48.757	ENSSHAG00000000296	POP1	99	48.757	Sarcophilus_harrisii
ENSPKIG00000016325	POP1	100	66.531	ENSSFOG00015007429	pop1	99	66.531	Scleropages_formosus
ENSPKIG00000016325	POP1	100	58.907	ENSSMAG00000010467	POP1	100	58.729	Scophthalmus_maximus
ENSPKIG00000016325	POP1	100	58.532	ENSSDUG00000007817	POP1	100	58.922	Seriola_dumerili
ENSPKIG00000016325	POP1	100	59.127	ENSSLDG00000012565	POP1	100	59.310	Seriola_lalandi_dorsalis
ENSPKIG00000016325	POP1	100	46.273	ENSSPUG00000003550	-	100	46.176	Sphenodon_punctatus
ENSPKIG00000016325	POP1	100	56.740	ENSSPAG00000014955	pop1	100	56.137	Stegastes_partitus
ENSPKIG00000016325	POP1	100	50.194	ENSSSCG00000006078	POP1	100	49.903	Sus_scrofa
ENSPKIG00000016325	POP1	93	46.639	ENSTGUG00000012011	-	100	46.534	Taeniopygia_guttata
ENSPKIG00000016325	POP1	100	57.389	ENSTRUG00000010856	pop1	100	56.738	Takifugu_rubripes
ENSPKIG00000016325	POP1	93	59.197	ENSTNIG00000013297	pop1	98	59.067	Tetraodon_nigroviridis
ENSPKIG00000016325	POP1	92	48.954	ENSTBEG00000014214	POP1	96	49.321	Tupaia_belangeri
ENSPKIG00000016325	POP1	100	48.792	ENSTTRG00000016071	POP1	100	48.889	Tursiops_truncatus
ENSPKIG00000016325	POP1	99	50.000	ENSUAMG00000017309	POP1	100	50.000	Ursus_americanus
ENSPKIG00000016325	POP1	100	49.376	ENSUMAG00000016952	POP1	100	49.376	Ursus_maritimus
ENSPKIG00000016325	POP1	86	56.679	ENSVPAG00000008278	POP1	82	56.318	Vicugna_pacos
ENSPKIG00000016325	POP1	100	49.229	ENSVVUG00000010994	POP1	100	49.229	Vulpes_vulpes
ENSPKIG00000016325	POP1	100	52.284	ENSXCOG00000017043	POP1	100	51.878	Xiphophorus_couchianus
ENSPKIG00000016325	POP1	100	58.571	ENSXMAG00000002472	POP1	100	58.571	Xiphophorus_maculatus