EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPKIG00000016497 (Gene tree)
Gene ID
111842193
Gene Symbol
MSI1
Alias
-
Full Name
RNA-binding protein Musashi homolog 1
Gene Type
protein_coding
Species
Paramormyrops_kingsleyae
Status
putative
Strand
Minus strand
Length
33016 bases
Position
chrPGUA01000010.1:800935-833950
Accession
111842193
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPKIP00000039057RRM_1PF00076.221.1e-3212
ENSPKIP00000039057RRM_1PF00076.221.1e-3222
ENSPKIP00000038964RRM_1PF00076.221.3e-3212
ENSPKIP00000038964RRM_1PF00076.221.3e-3222
ENSPKIP00000038986RRM_1PF00076.221.3e-3212
ENSPKIP00000038986RRM_1PF00076.221.3e-3222
ENSPKIP00000039016RRM_1PF00076.221.4e-3212
ENSPKIP00000039016RRM_1PF00076.221.4e-3222
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPKIT00000020057MSI1-2042793-ENSPKIP00000039057329 (aa)XP_023664332UPI000CD6151E
ENSPKIT00000019985MSI1-2023414-ENSPKIP00000038986348 (aa)XP_023664329UPI000CD62990
ENSPKIT00000019962MSI1-2015494-ENSPKIP00000038964348 (aa)XP_023664329UPI000CD62990
ENSPKIT00000020015MSI1-2032909-ENSPKIP00000039016357 (aa)XP_023664327UPI000CD5DEAB
Gene Model
Click here to download ENSPKIG00000016497's gene model file
Pathways
Pathway IDPathway NameSource
pki03015mRNA surveillance pathwayKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000016497's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPKIG00000016497MSI15540.860ENSPKIG00000006240hnrnpa1b7337.445
ENSPKIG00000016497MSI15538.587ENSPKIG00000020290-6938.288
ENSPKIG00000016497MSI19673.734ENSPKIG00000007038-9469.394
ENSPKIG00000016497MSI15241.379ENSPKIG00000020270HNRNPA08037.872
ENSPKIG00000016497MSI18234.351ENSPKIG00000007696dazap15341.379
ENSPKIG00000016497MSI15241.040ENSPKIG00000020281-6538.739
ENSPKIG00000016497MSI15545.556ENSPKIG00000018904-7340.000
ENSPKIG00000016497MSI15733.155ENSPKIG00000012179tardbp6030.337
ENSPKIG00000016497MSI15640.107ENSPKIG00000022916hnrnpa36740.323
ENSPKIG00000016497MSI17138.525ENSPKIG00000025514hnrnpdl7739.574
ENSPKIG00000016497MSI15847.619ENSPKIG00000025512hnrnpd7341.202
ENSPKIG00000016497MSI16040.541ENSPKIG00000003028hnrnpa1b7438.053
ENSPKIG00000016497MSI110094.828ENSPKIG00000023575-10094.828
ENSPKIG00000016497MSI15745.361ENSPKIG00000008659hnrnpaba7738.806
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPKIG00000016497MSI110085.083ENSG00000135097MSI19988.362Homo_sapiens
ENSPKIG00000016497MSI110093.123ENSAPOG00000023458-10093.123Acanthochromis_polyacanthus
ENSPKIG00000016497MSI110094.286ENSAPOG00000003191MSI110094.286Acanthochromis_polyacanthus
ENSPKIG00000016497MSI18888.462ENSAMEG00000013302MSI19291.880Ailuropoda_melanoleuca
ENSPKIG00000016497MSI19091.262ENSACIG00000017754-7691.722Amphilophus_citrinellus
ENSPKIG00000016497MSI19487.179ENSAOCG00000009031-9587.179Amphiprion_ocellaris
ENSPKIG00000016497MSI110094.286ENSAOCG00000003804MSI110094.286Amphiprion_ocellaris
ENSPKIG00000016497MSI110094.286ENSAPEG00000003245MSI110094.286Amphiprion_percula
ENSPKIG00000016497MSI110093.123ENSAPEG00000006857-8493.123Amphiprion_percula
ENSPKIG00000016497MSI110085.876ENSATEG00000023779-10085.876Anabas_testudineus
ENSPKIG00000016497MSI110089.014ENSATEG00000017059MSI110089.014Anabas_testudineus
ENSPKIG00000016497MSI110085.042ENSACAG00000002762MSI19688.116Anolis_carolinensis
ENSPKIG00000016497MSI18284.965ENSANAG00000027901-8884.965Aotus_nancymaae
ENSPKIG00000016497MSI110085.083ENSANAG00000027151MSI110085.083Aotus_nancymaae
ENSPKIG00000016497MSI110093.732ENSACLG00000011230MSI110093.732Astatotilapia_calliptera
ENSPKIG00000016497MSI110093.678ENSACLG00000000117-10093.884Astatotilapia_calliptera
ENSPKIG00000016497MSI19490.333ENSAMXG00000038960msi17690.282Astyanax_mexicanus
ENSPKIG00000016497MSI110085.083ENSBTAG00000009800MSI110088.509Bos_taurus
ENSPKIG00000016497MSI110085.083ENSCJAG00000008578MSI110085.083Callithrix_jacchus
ENSPKIG00000016497MSI110084.807ENSCAFG00000010283MSI110084.807Canis_familiaris
ENSPKIG00000016497MSI19486.495ENSCAFG00020020585MSI110086.495Canis_lupus_dingo
ENSPKIG00000016497MSI110083.379ENSCHIG00000024304MSI110083.379Capra_hircus
ENSPKIG00000016497MSI19485.933ENSTSYG00000033949MSI19585.933Carlito_syrichta
ENSPKIG00000016497MSI19486.081ENSCAPG00000003919MSI17886.081Cavia_aperea
ENSPKIG00000016497MSI19586.337ENSCPOG00000012361MSI110086.550Cavia_porcellus
ENSPKIG00000016497MSI110085.083ENSCCAG00000035567MSI110085.083Cebus_capucinus
ENSPKIG00000016497MSI110085.083ENSCATG00000030019MSI110085.083Cercocebus_atys
ENSPKIG00000016497MSI19486.550ENSCLAG00000011329MSI110086.550Chinchilla_lanigera
ENSPKIG00000016497MSI17489.754ENSCSAG00000002265MSI19684.116Chlorocebus_sabaeus
ENSPKIG00000016497MSI110088.604ENSCPBG00000011349MSI110088.604Chrysemys_picta_bellii
ENSPKIG00000016497MSI19485.976ENSCANG00000040651MSI110085.976Colobus_angolensis_palliatus
ENSPKIG00000016497MSI110085.083ENSCGRG00001018883Msi110085.083Cricetulus_griseus_chok1gshd
ENSPKIG00000016497MSI19486.018ENSCGRG00000002191Msi17286.018Cricetulus_griseus_crigri
ENSPKIG00000016497MSI110093.143ENSCSEG00000005834-10093.143Cynoglossus_semilaevis
ENSPKIG00000016497MSI19489.286ENSCSEG00000011032MSI110089.286Cynoglossus_semilaevis
ENSPKIG00000016497MSI110092.401ENSCSEG00000008352-10092.401Cynoglossus_semilaevis
ENSPKIG00000016497MSI16276.959ENSCVAG00000017463-8976.959Cyprinodon_variegatus
ENSPKIG00000016497MSI15468.657ENSCVAG00000017430zgc:1107969468.657Cyprinodon_variegatus
ENSPKIG00000016497MSI110094.225ENSCVAG00000009100MSI110094.225Cyprinodon_variegatus
ENSPKIG00000016497MSI19492.230ENSDARG00000010710msi110093.458Danio_rerio
ENSPKIG00000016497MSI17994.884ENSDARG00000102015CABZ01037298.19894.884Danio_rerio
ENSPKIG00000016497MSI19482.911ENSDNOG00000005713MSI19182.911Dasypus_novemcinctus
ENSPKIG00000016497MSI19485.329ENSDORG00000005610Msi19485.329Dipodomys_ordii
ENSPKIG00000016497MSI19482.927ENSETEG00000004756MSI110082.927Echinops_telfairi
ENSPKIG00000016497MSI110086.880ENSEASG00005004736MSI110086.880Equus_asinus_asinus
ENSPKIG00000016497MSI110085.083ENSECAG00000017526MSI110085.083Equus_caballus
ENSPKIG00000016497MSI19489.097ENSELUG00000023280-10088.785Esox_lucius
ENSPKIG00000016497MSI19688.095ENSELUG00000023219MSI19287.679Esox_lucius
ENSPKIG00000016497MSI110085.083ENSFCAG00000011007MSI110085.083Felis_catus
ENSPKIG00000016497MSI19490.333ENSFALG00000007574MSI110090.333Ficedula_albicollis
ENSPKIG00000016497MSI19485.671ENSFDAG00000019586MSI110085.671Fukomys_damarensis
ENSPKIG00000016497MSI110093.410ENSFHEG00000022446MSI110093.410Fundulus_heteroclitus
ENSPKIG00000016497MSI110093.714ENSFHEG00000003560-10093.714Fundulus_heteroclitus
ENSPKIG00000016497MSI110084.746ENSGMOG00000017838-10084.463Gadus_morhua
ENSPKIG00000016497MSI110092.529ENSGMOG00000001006MSI19992.241Gadus_morhua
ENSPKIG00000016497MSI19490.458ENSGALG00000007227MSI19777.892Gallus_gallus
ENSPKIG00000016497MSI110075.602ENSGAFG00000005860-10075.602Gambusia_affinis
ENSPKIG00000016497MSI19493.902ENSGAFG00000021522MSI19493.902Gambusia_affinis
ENSPKIG00000016497MSI110085.873ENSGACG00000008674-10085.873Gasterosteus_aculeatus
ENSPKIG00000016497MSI110091.404ENSGACG00000012679MSI110091.404Gasterosteus_aculeatus
ENSPKIG00000016497MSI110090.361ENSGAGG00000016037MSI110090.361Gopherus_agassizii
ENSPKIG00000016497MSI19486.306ENSGGOG00000010328MSI110086.306Gorilla_gorilla
ENSPKIG00000016497MSI110093.678ENSHBUG00000011841-10093.678Haplochromis_burtoni
ENSPKIG00000016497MSI110093.732ENSHBUG00000021921MSI110093.732Haplochromis_burtoni
ENSPKIG00000016497MSI110084.807ENSHGLG00000012782MSI110084.807Heterocephalus_glaber_female
ENSPKIG00000016497MSI19485.671ENSHGLG00100016848MSI110085.671Heterocephalus_glaber_male
ENSPKIG00000016497MSI110088.352ENSHCOG00000012067-10088.352Hippocampus_comes
ENSPKIG00000016497MSI19492.857ENSHCOG00000012019MSI110092.857Hippocampus_comes
ENSPKIG00000016497MSI110089.112ENSIPUG00000001976msi19990.000Ictalurus_punctatus
ENSPKIG00000016497MSI19486.495ENSSTOG00000009799MSI110086.495Ictidomys_tridecemlineatus
ENSPKIG00000016497MSI110074.561ENSJJAG00000010643-10074.561Jaculus_jaculus
ENSPKIG00000016497MSI110085.083ENSJJAG00000010463Msi110085.083Jaculus_jaculus
ENSPKIG00000016497MSI19494.156ENSKMAG00000019877-10094.156Kryptolebias_marmoratus
ENSPKIG00000016497MSI110093.103ENSKMAG00000011251MSI110093.103Kryptolebias_marmoratus
ENSPKIG00000016497MSI110093.939ENSLBEG00000008789MSI110093.939Labrus_bergylta
ENSPKIG00000016497MSI110094.286ENSLBEG00000001375-10094.286Labrus_bergylta
ENSPKIG00000016497MSI19485.756ENSLACG00000018287MSI110085.756Latimeria_chalumnae
ENSPKIG00000016497MSI15582.727ENSLOCG00000008618zgc:1107967182.727Lepisosteus_oculatus
ENSPKIG00000016497MSI19078.033ENSLAFG00000009412MSI110078.033Loxodonta_africana
ENSPKIG00000016497MSI19486.550ENSMFAG00000001798MSI110086.550Macaca_fascicularis
ENSPKIG00000016497MSI19486.550ENSMMUG00000031527MSI19785.879Macaca_mulatta
ENSPKIG00000016497MSI110086.880ENSMNEG00000040034MSI110086.880Macaca_nemestrina
ENSPKIG00000016497MSI19485.976ENSMLEG00000003921MSI110085.976Mandrillus_leucophaeus
ENSPKIG00000016497MSI110093.429ENSMAMG00000018426-10093.714Mastacembelus_armatus
ENSPKIG00000016497MSI110092.816ENSMAMG00000002279MSI110092.816Mastacembelus_armatus
ENSPKIG00000016497MSI110093.732ENSMZEG00005026892MSI110093.732Maylandia_zebra
ENSPKIG00000016497MSI110093.921ENSMZEG00005000340-10093.921Maylandia_zebra
ENSPKIG00000016497MSI16795.266ENSMGAG00000016518-10095.266Meleagris_gallopavo
ENSPKIG00000016497MSI16892.411ENSMAUG00000016820Msi110089.300Mesocricetus_auratus
ENSPKIG00000016497MSI110085.083ENSMICG00000033181MSI110085.083Microcebus_murinus
ENSPKIG00000016497MSI110084.807ENSMOCG00000002286Msi110084.807Microtus_ochrogaster
ENSPKIG00000016497MSI110088.146ENSMMOG00000012265-9992.105Mola_mola
ENSPKIG00000016497MSI19487.055ENSMMOG00000010492MSI19487.055Mola_mola
ENSPKIG00000016497MSI19160.241ENSMODG00000003189-10060.241Monodelphis_domestica
ENSPKIG00000016497MSI110093.391ENSMALG00000017889MSI110093.391Monopterus_albus
ENSPKIG00000016497MSI19494.190ENSMALG00000001426-10094.190Monopterus_albus
ENSPKIG00000016497MSI110084.530MGP_CAROLIEiJ_G0027626Msi19890.494Mus_caroli
ENSPKIG00000016497MSI110084.530ENSMUSG00000054256Msi19890.494Mus_musculus
ENSPKIG00000016497MSI110087.429MGP_PahariEiJ_G0024206Msi19890.840Mus_pahari
ENSPKIG00000016497MSI110084.530MGP_SPRETEiJ_G0028624Msi19890.494Mus_spretus
ENSPKIG00000016497MSI19486.495ENSMPUG00000003168MSI110086.495Mustela_putorius_furo
ENSPKIG00000016497MSI19477.381ENSMLUG00000010313MSI110077.381Myotis_lucifugus
ENSPKIG00000016497MSI19486.018ENSNGAG00000014508Msi19186.018Nannospalax_galili
ENSPKIG00000016497MSI110093.921ENSNBRG00000000841-10093.921Neolamprologus_brichardi
ENSPKIG00000016497MSI18985.656ENSNBRG00000018012MSI19985.656Neolamprologus_brichardi
ENSPKIG00000016497MSI19076.220ENSNLEG00000015636MSI110076.220Nomascus_leucogenys
ENSPKIG00000016497MSI19466.768ENSMEUG00000015759MSI110066.768Notamacropus_eugenii
ENSPKIG00000016497MSI19178.730ENSOPRG00000016879MSI110078.730Ochotona_princeps
ENSPKIG00000016497MSI19485.976ENSODEG00000006328MSI110085.976Octodon_degus
ENSPKIG00000016497MSI110095.865ENSONIG00000011182MSI110093.678Oreochromis_niloticus
ENSPKIG00000016497MSI110090.385ENSONIG00000019452-10090.385Oreochromis_niloticus
ENSPKIG00000016497MSI19486.495ENSOCUG00000027716MSI110086.495Oryctolagus_cuniculus
ENSPKIG00000016497MSI110093.143ENSORLG00000029593MSI110093.143Oryzias_latipes
ENSPKIG00000016497MSI110093.123ENSORLG00000019978-10093.123Oryzias_latipes
ENSPKIG00000016497MSI110093.143ENSORLG00020008266MSI19994.175Oryzias_latipes_hni
ENSPKIG00000016497MSI110093.123ENSORLG00020001208-7193.123Oryzias_latipes_hni
ENSPKIG00000016497MSI110093.333ENSORLG00015013672-7693.333Oryzias_latipes_hsok
ENSPKIG00000016497MSI110093.143ENSORLG00015003916MSI19994.175Oryzias_latipes_hsok
ENSPKIG00000016497MSI110093.410ENSOMEG00000017536MSI110093.410Oryzias_melastigma
ENSPKIG00000016497MSI110093.429ENSOMEG00000002272-10093.429Oryzias_melastigma
ENSPKIG00000016497MSI19982.418ENSOGAG00000003847MSI19685.143Otolemur_garnettii
ENSPKIG00000016497MSI19483.333ENSOARG00000012097MSI110083.333Ovis_aries
ENSPKIG00000016497MSI19485.976ENSPPAG00000043073MSI110085.976Pan_paniscus
ENSPKIG00000016497MSI110085.083ENSPPRG00000000370MSI110085.083Panthera_pardus
ENSPKIG00000016497MSI19486.495ENSPTIG00000008913MSI110086.495Panthera_tigris_altaica
ENSPKIG00000016497MSI110085.083ENSPTRG00000005531MSI110085.083Pan_troglodytes
ENSPKIG00000016497MSI110084.807ENSPANG00000006335MSI110084.807Papio_anubis
ENSPKIG00000016497MSI19487.195ENSPSIG00000011608-9387.195Pelodiscus_sinensis
ENSPKIG00000016497MSI17982.018ENSPSIG00000009621-10082.018Pelodiscus_sinensis
ENSPKIG00000016497MSI15186.842ENSPSIG00000016295-9585.470Pelodiscus_sinensis
ENSPKIG00000016497MSI19093.243ENSPMGG00000000514MSI19594.118Periophthalmus_magnuspinnatus
ENSPKIG00000016497MSI19475.455ENSPMGG00000007743-9273.375Periophthalmus_magnuspinnatus
ENSPKIG00000016497MSI19484.570ENSPEMG00000010491Msi19584.570Peromyscus_maniculatus_bairdii
ENSPKIG00000016497MSI110093.714ENSPFOG00000008319-8693.714Poecilia_formosa
ENSPKIG00000016497MSI110093.410ENSPFOG00000013113MSI110093.410Poecilia_formosa
ENSPKIG00000016497MSI110093.410ENSPLAG00000014025-10093.410Poecilia_latipinna
ENSPKIG00000016497MSI110093.714ENSPLAG00000012431-9793.714Poecilia_latipinna
ENSPKIG00000016497MSI110093.143ENSPMEG00000007025-9387.898Poecilia_mexicana
ENSPKIG00000016497MSI110093.636ENSPMEG00000012796MSI110093.636Poecilia_mexicana
ENSPKIG00000016497MSI19591.054ENSPREG00000021416-9591.054Poecilia_reticulata
ENSPKIG00000016497MSI15887.129ENSPREG00000014574-10087.129Poecilia_reticulata
ENSPKIG00000016497MSI110084.254ENSPPYG00000005027MSI110084.254Pongo_abelii
ENSPKIG00000016497MSI17689.848ENSPCAG00000002300MSI17289.848Procavia_capensis
ENSPKIG00000016497MSI110085.083ENSPCOG00000017341MSI110085.083Propithecus_coquereli
ENSPKIG00000016497MSI19469.817ENSPVAG00000002225MSI110069.817Pteropus_vampyrus
ENSPKIG00000016497MSI110093.732ENSPNYG00000004379MSI110093.732Pundamilia_nyererei
ENSPKIG00000016497MSI110093.678ENSPNYG00000002529-10093.678Pundamilia_nyererei
ENSPKIG00000016497MSI110090.544ENSPNAG00000019337msi110090.544Pygocentrus_nattereri
ENSPKIG00000016497MSI19486.174ENSRNOG00000001156Msi110086.174Rattus_norvegicus
ENSPKIG00000016497MSI19486.495ENSRBIG00000036889MSI110086.495Rhinopithecus_bieti
ENSPKIG00000016497MSI19485.758ENSRROG00000041076MSI19385.758Rhinopithecus_roxellana
ENSPKIG00000016497MSI19486.550ENSSBOG00000030259MSI19886.550Saimiri_boliviensis_boliviensis
ENSPKIG00000016497MSI19476.797ENSSHAG00000006834MSI110076.797Sarcophilus_harrisii
ENSPKIG00000016497MSI19499.085ENSSFOG00015014964-9599.085Scleropages_formosus
ENSPKIG00000016497MSI19495.793ENSSFOG00015005350MSI110095.793Scleropages_formosus
ENSPKIG00000016497MSI19493.266ENSSMAG00000018824MSI19793.266Scophthalmus_maximus
ENSPKIG00000016497MSI19494.253ENSSMAG00000009156-7493.596Scophthalmus_maximus
ENSPKIG00000016497MSI110094.571ENSSDUG00000022697-10094.571Seriola_dumerili
ENSPKIG00000016497MSI110093.123ENSSDUG00000001027MSI110093.123Seriola_dumerili
ENSPKIG00000016497MSI110093.333ENSSLDG00000016832MSI110093.333Seriola_lalandi_dorsalis
ENSPKIG00000016497MSI110086.006ENSSLDG00000018706-9989.308Seriola_lalandi_dorsalis
ENSPKIG00000016497MSI110088.319ENSSPUG00000015741MSI110088.319Sphenodon_punctatus
ENSPKIG00000016497MSI19495.161ENSSPAG00000013098-10094.817Stegastes_partitus
ENSPKIG00000016497MSI15783.750ENSSPAG00000015573zgc:1107968283.750Stegastes_partitus
ENSPKIG00000016497MSI15881.152ENSSPAG00000014085-10081.152Stegastes_partitus
ENSPKIG00000016497MSI110086.589ENSSSCG00000029365MSI110086.589Sus_scrofa
ENSPKIG00000016497MSI19487.647ENSTGUG00000009534MSI110087.647Taeniopygia_guttata
ENSPKIG00000016497MSI18190.323ENSTRUG00000016249MSI110081.423Takifugu_rubripes
ENSPKIG00000016497MSI19488.176ENSTRUG00000015636-7988.176Takifugu_rubripes
ENSPKIG00000016497MSI15388.660ENSTRUG00000021586-9988.660Takifugu_rubripes
ENSPKIG00000016497MSI19967.372ENSTNIG00000019814-9668.652Tetraodon_nigroviridis
ENSPKIG00000016497MSI110088.604ENSTNIG00000011469MSI110088.604Tetraodon_nigroviridis
ENSPKIG00000016497MSI19476.923ENSTBEG00000007182MSI110076.923Tupaia_belangeri
ENSPKIG00000016497MSI17689.098ENSTTRG00000005663MSI17889.098Tursiops_truncatus
ENSPKIG00000016497MSI17586.175ENSUAMG00000015514MSI19488.889Ursus_americanus
ENSPKIG00000016497MSI19484.564ENSUMAG00000006176MSI18884.564Ursus_maritimus
ENSPKIG00000016497MSI19486.018ENSVVUG00000020993MSI110085.285Vulpes_vulpes
ENSPKIG00000016497MSI110085.632ENSXETG00000012216msi110085.632Xenopus_tropicalis
ENSPKIG00000016497MSI19481.877ENSXCOG00000017605MSI18981.877Xiphophorus_couchianus
ENSPKIG00000016497MSI110093.429ENSXMAG00000018237-10093.429Xiphophorus_maculatus
ENSPKIG00000016497MSI110093.966ENSXMAG00000027103MSI110086.310Xiphophorus_maculatus

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