EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPKIG00000016716 (Gene tree)
Gene ID: 111853432
Gene Symbol: si:dkey-85a20.4
Alias: -
Full Name: TAR (HIV-1) RNA binding protein 1
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Minus strand
Length: 19942 bases
Position: chrPGUA01000255.1:488883-508824
Accession: 111853432
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000039319	SpoU_methylase	PF00588.19	1.8e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000020321	-	6478	-	ENSPKIP00000039319	1639 (aa)	XP_023686046	UPI000CD64309

Gene Model

Click here to download ENSPKIG00000016716's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000016716's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000016716	si:dkey-85a20.4	85	46.779	ENSG00000059588	TARBP1	100	43.229	Homo_sapiens
ENSPKIG00000016716	si:dkey-85a20.4	99	57.264	ENSAPOG00000016419	si:dkey-85a20.4	99	57.264	Acanthochromis_polyacanthus
ENSPKIG00000016716	si:dkey-85a20.4	82	46.724	ENSAMEG00000003359	TARBP1	99	46.724	Ailuropoda_melanoleuca
ENSPKIG00000016716	si:dkey-85a20.4	99	57.169	ENSATEG00000020266	si:dkey-85a20.4	99	57.290	Anabas_testudineus
ENSPKIG00000016716	si:dkey-85a20.4	82	46.945	ENSAPLG00000007666	TARBP1	99	47.195	Anas_platyrhynchos
ENSPKIG00000016716	si:dkey-85a20.4	83	44.292	ENSACAG00000001142	TARBP1	99	40.931	Anolis_carolinensis
ENSPKIG00000016716	si:dkey-85a20.4	85	46.117	ENSANAG00000022031	TARBP1	89	46.015	Aotus_nancymaae
ENSPKIG00000016716	si:dkey-85a20.4	88	45.737	ENSBTAG00000004517	TARBP1	99	51.908	Bos_taurus
ENSPKIG00000016716	si:dkey-85a20.4	99	43.144	ENSCJAG00000018155	TARBP1	100	43.203	Callithrix_jacchus
ENSPKIG00000016716	si:dkey-85a20.4	82	46.936	ENSCAFG00000011533	TARBP1	96	46.999	Canis_familiaris
ENSPKIG00000016716	si:dkey-85a20.4	82	47.004	ENSCAFG00020027141	TARBP1	99	42.612	Canis_lupus_dingo
ENSPKIG00000016716	si:dkey-85a20.4	88	46.007	ENSCHIG00000011437	TARBP1	99	43.345	Capra_hircus
ENSPKIG00000016716	si:dkey-85a20.4	79	47.738	ENSTSYG00000010382	TARBP1	96	47.738	Carlito_syrichta
ENSPKIG00000016716	si:dkey-85a20.4	78	45.637	ENSCAPG00000010831	TARBP1	99	45.637	Cavia_aperea
ENSPKIG00000016716	si:dkey-85a20.4	85	46.972	ENSCPOG00000013995	TARBP1	99	43.165	Cavia_porcellus
ENSPKIG00000016716	si:dkey-85a20.4	82	54.414	ENSCCAG00000037278	TARBP1	100	54.414	Cebus_capucinus
ENSPKIG00000016716	si:dkey-85a20.4	85	46.989	ENSCATG00000011754	TARBP1	100	43.136	Cercocebus_atys
ENSPKIG00000016716	si:dkey-85a20.4	79	46.997	ENSCLAG00000003655	TARBP1	96	47.143	Chinchilla_lanigera
ENSPKIG00000016716	si:dkey-85a20.4	79	47.504	ENSCSAG00000010100	TARBP1	100	47.504	Chlorocebus_sabaeus
ENSPKIG00000016716	si:dkey-85a20.4	94	42.095	ENSCPBG00000005587	TARBP1	98	42.325	Chrysemys_picta_bellii
ENSPKIG00000016716	si:dkey-85a20.4	83	47.704	ENSCANG00000034343	TARBP1	99	47.704	Colobus_angolensis_palliatus
ENSPKIG00000016716	si:dkey-85a20.4	84	46.775	ENSCGRG00001016690	Tarbp1	87	46.775	Cricetulus_griseus_chok1gshd
ENSPKIG00000016716	si:dkey-85a20.4	84	46.775	ENSCGRG00000016893	Tarbp1	94	46.775	Cricetulus_griseus_crigri
ENSPKIG00000016716	si:dkey-85a20.4	99	53.228	ENSCSEG00000005255	si:dkey-85a20.4	99	57.837	Cynoglossus_semilaevis
ENSPKIG00000016716	si:dkey-85a20.4	99	56.642	ENSDARG00000079055	si:dkey-85a20.4	99	68.942	Danio_rerio
ENSPKIG00000016716	si:dkey-85a20.4	85	46.336	ENSDNOG00000008637	TARBP1	99	42.916	Dasypus_novemcinctus
ENSPKIG00000016716	si:dkey-85a20.4	79	47.619	ENSDORG00000007984	Tarbp1	100	47.619	Dipodomys_ordii
ENSPKIG00000016716	si:dkey-85a20.4	88	46.201	ENSEASG00005000252	TARBP1	99	43.600	Equus_asinus_asinus
ENSPKIG00000016716	si:dkey-85a20.4	88	46.154	ENSECAG00000023673	TARBP1	99	47.883	Equus_caballus
ENSPKIG00000016716	si:dkey-85a20.4	99	58.612	ENSELUG00000012193	si:dkey-85a20.4	99	58.612	Esox_lucius
ENSPKIG00000016716	si:dkey-85a20.4	82	45.047	ENSFCAG00000014183	TARBP1	99	41.036	Felis_catus
ENSPKIG00000016716	si:dkey-85a20.4	79	47.352	ENSFALG00000013565	TARBP1	99	47.285	Ficedula_albicollis
ENSPKIG00000016716	si:dkey-85a20.4	78	45.830	ENSFDAG00000001308	TARBP1	99	45.830	Fukomys_damarensis
ENSPKIG00000016716	si:dkey-85a20.4	95	63.846	ENSFHEG00000007565	si:dkey-85a20.4	99	63.846	Fundulus_heteroclitus
ENSPKIG00000016716	si:dkey-85a20.4	84	58.304	ENSGMOG00000004549	si:dkey-85a20.4	99	58.304	Gadus_morhua
ENSPKIG00000016716	si:dkey-85a20.4	79	51.603	ENSGALG00000011000	TARBP1	99	47.065	Gallus_gallus
ENSPKIG00000016716	si:dkey-85a20.4	99	55.589	ENSGAFG00000007387	si:dkey-85a20.4	99	55.589	Gambusia_affinis
ENSPKIG00000016716	si:dkey-85a20.4	85	59.831	ENSGACG00000005865	si:dkey-85a20.4	99	59.972	Gasterosteus_aculeatus
ENSPKIG00000016716	si:dkey-85a20.4	82	48.127	ENSGAGG00000012102	TARBP1	89	47.368	Gopherus_agassizii
ENSPKIG00000016716	si:dkey-85a20.4	83	46.331	ENSGGOG00000022879	TARBP1	99	46.331	Gorilla_gorilla
ENSPKIG00000016716	si:dkey-85a20.4	99	57.524	ENSHBUG00000008877	si:dkey-85a20.4	99	57.524	Haplochromis_burtoni
ENSPKIG00000016716	si:dkey-85a20.4	85	47.080	ENSHGLG00000011592	TARBP1	99	43.408	Heterocephalus_glaber_female
ENSPKIG00000016716	si:dkey-85a20.4	85	47.067	ENSHGLG00100015169	TARBP1	95	47.067	Heterocephalus_glaber_male
ENSPKIG00000016716	si:dkey-85a20.4	96	58.281	ENSIPUG00000005249	si:dkey-85a20.4	98	54.518	Ictalurus_punctatus
ENSPKIG00000016716	si:dkey-85a20.4	82	47.353	ENSSTOG00000032291	TARBP1	96	47.353	Ictidomys_tridecemlineatus
ENSPKIG00000016716	si:dkey-85a20.4	84	45.384	ENSJJAG00000017840	Tarbp1	95	45.384	Jaculus_jaculus
ENSPKIG00000016716	si:dkey-85a20.4	85	60.375	ENSKMAG00000017546	si:dkey-85a20.4	90	60.509	Kryptolebias_marmoratus
ENSPKIG00000016716	si:dkey-85a20.4	81	63.852	ENSLBEG00000012132	si:dkey-85a20.4	93	63.852	Labrus_bergylta
ENSPKIG00000016716	si:dkey-85a20.4	99	43.411	ENSLACG00000004337	TARBP1	99	43.351	Latimeria_chalumnae
ENSPKIG00000016716	si:dkey-85a20.4	99	57.737	ENSLOCG00000016214	si:dkey-85a20.4	100	57.737	Lepisosteus_oculatus
ENSPKIG00000016716	si:dkey-85a20.4	84	46.381	ENSLAFG00000011394	TARBP1	99	43.478	Loxodonta_africana
ENSPKIG00000016716	si:dkey-85a20.4	85	45.626	ENSMFAG00000041068	TARBP1	100	42.406	Macaca_fascicularis
ENSPKIG00000016716	si:dkey-85a20.4	85	45.626	ENSMMUG00000021703	TARBP1	100	42.056	Macaca_mulatta
ENSPKIG00000016716	si:dkey-85a20.4	85	46.919	ENSMNEG00000045002	TARBP1	100	43.077	Macaca_nemestrina
ENSPKIG00000016716	si:dkey-85a20.4	83	47.304	ENSMLEG00000044182	TARBP1	100	47.304	Mandrillus_leucophaeus
ENSPKIG00000016716	si:dkey-85a20.4	99	56.265	ENSMAMG00000021760	si:dkey-85a20.4	99	56.448	Mastacembelus_armatus
ENSPKIG00000016716	si:dkey-85a20.4	99	57.403	ENSMZEG00005005751	si:dkey-85a20.4	99	57.403	Maylandia_zebra
ENSPKIG00000016716	si:dkey-85a20.4	99	42.745	ENSMAUG00000020968	Tarbp1	99	42.866	Mesocricetus_auratus
ENSPKIG00000016716	si:dkey-85a20.4	85	41.790	ENSMICG00000015280	TARBP1	99	39.149	Microcebus_murinus
ENSPKIG00000016716	si:dkey-85a20.4	84	46.742	ENSMOCG00000004128	Tarbp1	87	46.742	Microtus_ochrogaster
ENSPKIG00000016716	si:dkey-85a20.4	99	55.141	ENSMMOG00000007795	si:dkey-85a20.4	99	55.324	Mola_mola
ENSPKIG00000016716	si:dkey-85a20.4	82	46.483	ENSMODG00000008504	TARBP1	99	42.087	Monodelphis_domestica
ENSPKIG00000016716	si:dkey-85a20.4	99	56.755	ENSMALG00000002916	si:dkey-85a20.4	99	56.755	Monopterus_albus
ENSPKIG00000016716	si:dkey-85a20.4	84	46.634	MGP_CAROLIEiJ_G0031729	Tarbp1	99	42.883	Mus_caroli
ENSPKIG00000016716	si:dkey-85a20.4	84	46.709	ENSMUSG00000090290	Tarbp1	99	42.943	Mus_musculus
ENSPKIG00000016716	si:dkey-85a20.4	84	46.610	MGP_PahariEiJ_G0023326	Tarbp1	99	43.114	Mus_pahari
ENSPKIG00000016716	si:dkey-85a20.4	84	46.620	MGP_SPRETEiJ_G0032846	Tarbp1	100	42.832	Mus_spretus
ENSPKIG00000016716	si:dkey-85a20.4	76	47.231	ENSMPUG00000002802	TARBP1	99	47.231	Mustela_putorius_furo
ENSPKIG00000016716	si:dkey-85a20.4	82	46.575	ENSMLUG00000002414	TARBP1	99	46.720	Myotis_lucifugus
ENSPKIG00000016716	si:dkey-85a20.4	85	46.910	ENSNLEG00000002518	TARBP1	100	43.424	Nomascus_leucogenys
ENSPKIG00000016716	si:dkey-85a20.4	52	53.669	ENSMEUG00000011370	-	66	53.669	Notamacropus_eugenii
ENSPKIG00000016716	si:dkey-85a20.4	66	52.961	ENSOPRG00000013822	TARBP1	66	52.961	Ochotona_princeps
ENSPKIG00000016716	si:dkey-85a20.4	85	46.414	ENSODEG00000005238	TARBP1	90	46.521	Octodon_degus
ENSPKIG00000016716	si:dkey-85a20.4	85	60.750	ENSONIG00000009789	si:dkey-85a20.4	99	60.962	Oreochromis_niloticus
ENSPKIG00000016716	si:dkey-85a20.4	85	46.272	ENSOCUG00000017418	TARBP1	99	43.120	Oryctolagus_cuniculus
ENSPKIG00000016716	si:dkey-85a20.4	99	54.688	ENSORLG00000010529	si:dkey-85a20.4	99	54.809	Oryzias_latipes
ENSPKIG00000016716	si:dkey-85a20.4	99	54.622	ENSORLG00020019264	si:dkey-85a20.4	99	54.743	Oryzias_latipes_hni
ENSPKIG00000016716	si:dkey-85a20.4	99	53.986	ENSORLG00015003276	si:dkey-85a20.4	99	54.106	Oryzias_latipes_hsok
ENSPKIG00000016716	si:dkey-85a20.4	85	45.328	ENSOGAG00000002379	TARBP1	99	41.716	Otolemur_garnettii
ENSPKIG00000016716	si:dkey-85a20.4	85	46.827	ENSOARG00000003434	TARBP1	95	46.044	Ovis_aries
ENSPKIG00000016716	si:dkey-85a20.4	83	47.489	ENSPPAG00000028097	TARBP1	99	47.489	Pan_paniscus
ENSPKIG00000016716	si:dkey-85a20.4	79	47.949	ENSPPRG00000013561	TARBP1	86	47.949	Panthera_pardus
ENSPKIG00000016716	si:dkey-85a20.4	82	46.715	ENSPTIG00000009281	TARBP1	99	46.715	Panthera_tigris_altaica
ENSPKIG00000016716	si:dkey-85a20.4	88	45.957	ENSPTRG00000002124	TARBP1	100	43.178	Pan_troglodytes
ENSPKIG00000016716	si:dkey-85a20.4	85	47.129	ENSPANG00000021933	TARBP1	100	43.254	Papio_anubis
ENSPKIG00000016716	si:dkey-85a20.4	78	47.389	ENSPSIG00000010699	TARBP1	99	47.312	Pelodiscus_sinensis
ENSPKIG00000016716	si:dkey-85a20.4	84	47.201	ENSPEMG00000006888	Tarbp1	92	47.201	Peromyscus_maniculatus_bairdii
ENSPKIG00000016716	si:dkey-85a20.4	75	68.020	ENSPCIG00000029710	TARBP1	98	68.020	Phascolarctos_cinereus
ENSPKIG00000016716	si:dkey-85a20.4	85	59.588	ENSPFOG00000013020	si:dkey-85a20.4	99	59.588	Poecilia_formosa
ENSPKIG00000016716	si:dkey-85a20.4	99	56.155	ENSPLAG00000006044	si:dkey-85a20.4	99	56.155	Poecilia_latipinna
ENSPKIG00000016716	si:dkey-85a20.4	99	56.242	ENSPMEG00000017857	si:dkey-85a20.4	99	56.242	Poecilia_mexicana
ENSPKIG00000016716	si:dkey-85a20.4	99	55.811	ENSPREG00000022753	si:dkey-85a20.4	99	55.811	Poecilia_reticulata
ENSPKIG00000016716	si:dkey-85a20.4	77	46.512	ENSPPYG00000000102	TARBP1	100	46.512	Pongo_abelii
ENSPKIG00000016716	si:dkey-85a20.4	66	75.163	ENSPCAG00000004808	TARBP1	81	75.163	Procavia_capensis
ENSPKIG00000016716	si:dkey-85a20.4	85	44.944	ENSPCOG00000005666	TARBP1	99	41.756	Propithecus_coquereli
ENSPKIG00000016716	si:dkey-85a20.4	80	59.375	ENSPVAG00000014798	TARBP1	96	58.863	Pteropus_vampyrus
ENSPKIG00000016716	si:dkey-85a20.4	99	55.373	ENSPNYG00000019135	si:dkey-85a20.4	100	55.373	Pundamilia_nyererei
ENSPKIG00000016716	si:dkey-85a20.4	99	41.766	ENSRNOG00000053574	Tarbp1	99	41.766	Rattus_norvegicus
ENSPKIG00000016716	si:dkey-85a20.4	85	44.258	ENSRBIG00000043362	TARBP1	94	44.258	Rhinopithecus_bieti
ENSPKIG00000016716	si:dkey-85a20.4	85	47.158	ENSRROG00000029527	TARBP1	90	47.158	Rhinopithecus_roxellana
ENSPKIG00000016716	si:dkey-85a20.4	83	47.266	ENSSBOG00000034503	TARBP1	97	47.338	Saimiri_boliviensis_boliviensis
ENSPKIG00000016716	si:dkey-85a20.4	82	46.488	ENSSHAG00000000013	TARBP1	99	46.488	Sarcophilus_harrisii
ENSPKIG00000016716	si:dkey-85a20.4	95	66.079	ENSSFOG00015002660	si:dkey-85a20.4	97	71.407	Scleropages_formosus
ENSPKIG00000016716	si:dkey-85a20.4	99	57.151	ENSSMAG00000007081	si:dkey-85a20.4	99	57.752	Scophthalmus_maximus
ENSPKIG00000016716	si:dkey-85a20.4	99	56.822	ENSSDUG00000023566	si:dkey-85a20.4	99	56.900	Seriola_dumerili
ENSPKIG00000016716	si:dkey-85a20.4	99	58.799	ENSSLDG00000020200	si:dkey-85a20.4	99	58.799	Seriola_lalandi_dorsalis
ENSPKIG00000016716	si:dkey-85a20.4	75	54.382	ENSSARG00000012207	TARBP1	76	54.382	Sorex_araneus
ENSPKIG00000016716	si:dkey-85a20.4	85	45.173	ENSSPUG00000015364	TARBP1	85	47.588	Sphenodon_punctatus
ENSPKIG00000016716	si:dkey-85a20.4	99	57.662	ENSSPAG00000007213	si:dkey-85a20.4	99	57.904	Stegastes_partitus
ENSPKIG00000016716	si:dkey-85a20.4	99	42.080	ENSSSCG00000010160	TARBP1	99	46.820	Sus_scrofa
ENSPKIG00000016716	si:dkey-85a20.4	79	46.812	ENSTGUG00000010214	TARBP1	100	46.812	Taeniopygia_guttata
ENSPKIG00000016716	si:dkey-85a20.4	93	52.056	ENSTNIG00000016586	si:dkey-85a20.4	99	57.403	Tetraodon_nigroviridis
ENSPKIG00000016716	si:dkey-85a20.4	78	43.607	ENSTTRG00000008707	TARBP1	85	43.123	Tursiops_truncatus
ENSPKIG00000016716	si:dkey-85a20.4	80	46.691	ENSUMAG00000006730	TARBP1	98	46.691	Ursus_maritimus
ENSPKIG00000016716	si:dkey-85a20.4	66	68.627	ENSVPAG00000007665	TARBP1	76	68.627	Vicugna_pacos
ENSPKIG00000016716	si:dkey-85a20.4	82	47.144	ENSVVUG00000007460	TARBP1	98	49.627	Vulpes_vulpes
ENSPKIG00000016716	si:dkey-85a20.4	82	43.714	ENSXETG00000016224	tarbp1	99	43.714	Xenopus_tropicalis
ENSPKIG00000016716	si:dkey-85a20.4	82	62.943	ENSXCOG00000011779	si:dkey-85a20.4	99	63.215	Xiphophorus_couchianus
ENSPKIG00000016716	si:dkey-85a20.4	64	57.224	ENSXMAG00000009600	si:dkey-85a20.4	100	57.413	Xiphophorus_maculatus