EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPKIG00000016887 (Gene tree)
Gene ID
111849336
Gene Symbol
patl2
Alias
-
Full Name
PAT1 homolog 2
Gene Type
protein_coding
Species
Paramormyrops_kingsleyae
Status
putative
Strand
Minus strand
Length
7558 bases
Position
chrPGUA01000020.1:2099942-2107499
Accession
111849336
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPKIP00000039584PAT1PF09770.92e-1311
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPKIT00000020593-3492-ENSPKIP00000039584713 (aa)XP_023677893UPI000CD66746
Gene Model
Click here to download ENSPKIG00000016887's gene model file
Pathways
Pathway IDPathway NameSource
pki03018RNA degradationKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000016887's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPKIG00000016887patl27732.730ENSPKIG00000016224patl16735.630
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPKIG00000016887patl26245.652ENSG00000229474PATL29949.862Homo_sapiens
ENSPKIG00000016887patl29555.620ENSAPOG00000022988patl29955.491Acanthochromis_polyacanthus
ENSPKIG00000016887patl25537.685ENSAPOG00000021290patl15538.177Acanthochromis_polyacanthus
ENSPKIG00000016887patl26234.064ENSAMEG00000014215PATL18731.223Ailuropoda_melanoleuca
ENSPKIG00000016887patl25848.252ENSAMEG00000014997PATL27549.132Ailuropoda_melanoleuca
ENSPKIG00000016887patl25537.931ENSACIG00000005182patl15338.177Amphilophus_citrinellus
ENSPKIG00000016887patl25437.656ENSAOCG00000021993patl15138.404Amphiprion_ocellaris
ENSPKIG00000016887patl28360.067ENSAOCG00000023738patl29655.389Amphiprion_ocellaris
ENSPKIG00000016887patl26764.241ENSAPEG00000011299patl29764.241Amphiprion_percula
ENSPKIG00000016887patl29453.690ENSATEG00000019567patl29953.768Anabas_testudineus
ENSPKIG00000016887patl28346.965ENSAPLG00000003980PATL29846.965Anas_platyrhynchos
ENSPKIG00000016887patl29431.187ENSACAG00000006607PATL19830.318Anolis_carolinensis
ENSPKIG00000016887patl26045.880ENSANAG00000022701PATL27248.166Aotus_nancymaae
ENSPKIG00000016887patl210053.378ENSACLG00000010326patl210053.189Astatotilapia_calliptera
ENSPKIG00000016887patl25536.275ENSAMXG00000010731patl15337.500Astyanax_mexicanus
ENSPKIG00000016887patl29955.632ENSAMXG00000020293patl29956.825Astyanax_mexicanus
ENSPKIG00000016887patl25047.945ENSBTAG00000001558PATL29947.945Bos_taurus
ENSPKIG00000016887patl25846.224ENSCJAG00000002379PATL27347.087Callithrix_jacchus
ENSPKIG00000016887patl25536.105ENSCJAG00000016192PATL19830.838Callithrix_jacchus
ENSPKIG00000016887patl26246.638ENSCAFG00000013629PATL27249.877Canis_familiaris
ENSPKIG00000016887patl26234.064ENSCAFG00000007581PATL18731.367Canis_familiaris
ENSPKIG00000016887patl26246.638ENSCAFG00020022169PATL27249.877Canis_lupus_dingo
ENSPKIG00000016887patl29430.800ENSCAFG00020001648PATL18731.367Canis_lupus_dingo
ENSPKIG00000016887patl26045.455ENSCHIG00000026665PATL27547.317Capra_hircus
ENSPKIG00000016887patl29430.607ENSTSYG00000012748PATL18332.596Carlito_syrichta
ENSPKIG00000016887patl26246.336ENSTSYG00000032456PATL27348.418Carlito_syrichta
ENSPKIG00000016887patl25535.915ENSCAPG00000013668PATL15335.915Cavia_aperea
ENSPKIG00000016887patl25535.915ENSCPOG00000006827PATL15335.915Cavia_porcellus
ENSPKIG00000016887patl25743.880ENSCPOG00000002922PATL27843.256Cavia_porcellus
ENSPKIG00000016887patl25845.455ENSCCAG00000025261PATL27346.683Cebus_capucinus
ENSPKIG00000016887patl25536.321ENSCATG00000009629PATL18632.153Cercocebus_atys
ENSPKIG00000016887patl26245.652ENSCATG00000034794PATL29949.587Cercocebus_atys
ENSPKIG00000016887patl25944.700ENSCLAG00000014407PATL27246.757Chinchilla_lanigera
ENSPKIG00000016887patl25536.620ENSCLAG00000003427PATL15436.385Chinchilla_lanigera
ENSPKIG00000016887patl25536.321ENSCSAG00000006095PATL19632.153Chlorocebus_sabaeus
ENSPKIG00000016887patl25846.977ENSCSAG00000009601PATL27347.666Chlorocebus_sabaeus
ENSPKIG00000016887patl25535.831ENSCHOG00000001611PATL16636.066Choloepus_hoffmanni
ENSPKIG00000016887patl27548.845ENSCPBG00000006150PATL28248.663Chrysemys_picta_bellii
ENSPKIG00000016887patl25847.775ENSCANG00000013856PATL27248.395Colobus_angolensis_palliatus
ENSPKIG00000016887patl25545.343ENSCGRG00001010801Patl27345.358Cricetulus_griseus_chok1gshd
ENSPKIG00000016887patl25545.343ENSCGRG00000013007Patl27345.358Cricetulus_griseus_crigri
ENSPKIG00000016887patl25537.438ENSCSEG00000008261patl15638.177Cynoglossus_semilaevis
ENSPKIG00000016887patl28457.214ENSCSEG00000009438patl28756.098Cynoglossus_semilaevis
ENSPKIG00000016887patl25438.500ENSCVAG00000006664patl15338.500Cyprinodon_variegatus
ENSPKIG00000016887patl27952.968ENSCVAG00000016203patl29052.968Cyprinodon_variegatus
ENSPKIG00000016887patl28260.922ENSDARG00000089567patl29657.244Danio_rerio
ENSPKIG00000016887patl26036.036ENSDARG00000017423patl15137.905Danio_rerio
ENSPKIG00000016887patl25846.774ENSDNOG00000036837PATL26747.407Dasypus_novemcinctus
ENSPKIG00000016887patl26533.461ENSDNOG00000038865PATL17436.451Dasypus_novemcinctus
ENSPKIG00000016887patl26146.154ENSDORG00000026649Patl27248.549Dipodomys_ordii
ENSPKIG00000016887patl25049.311ENSETEG00000005068PATL29949.311Echinops_telfairi
ENSPKIG00000016887patl25447.277ENSEASG00005017984PATL27147.277Equus_asinus_asinus
ENSPKIG00000016887patl29430.809ENSEASG00005007963PATL19830.260Equus_asinus_asinus
ENSPKIG00000016887patl25448.762ENSECAG00000013462PATL27248.762Equus_caballus
ENSPKIG00000016887patl25536.730ENSECAG00000011411PATL15436.730Equus_caballus
ENSPKIG00000016887patl25535.961ENSELUG00000024249patl15137.438Esox_lucius
ENSPKIG00000016887patl29957.538ENSELUG00000023244patl29957.261Esox_lucius
ENSPKIG00000016887patl25847.917ENSFCAG00000027170PATL27349.010Felis_catus
ENSPKIG00000016887patl25437.857ENSFALG00000012150PATL15337.740Ficedula_albicollis
ENSPKIG00000016887patl29441.813ENSFALG00000009768PATL29942.916Ficedula_albicollis
ENSPKIG00000016887patl25247.258ENSFDAG00000012242PATL27046.721Fukomys_damarensis
ENSPKIG00000016887patl25263.385ENSFHEG00000009727patl28963.385Fundulus_heteroclitus
ENSPKIG00000016887patl25960.233ENSGMOG00000005666patl29960.233Gadus_morhua
ENSPKIG00000016887patl25537.352ENSGALG00000042641PATL15437.709Gallus_gallus
ENSPKIG00000016887patl27951.489ENSGALG00000002167PATL27349.901Gallus_gallus
ENSPKIG00000016887patl210054.683ENSGAFG00000019344patl210053.992Gambusia_affinis
ENSPKIG00000016887patl25436.658ENSGACG00000016448patl15237.406Gasterosteus_aculeatus
ENSPKIG00000016887patl29431.406ENSGAGG00000004461PATL19830.759Gopherus_agassizii
ENSPKIG00000016887patl29430.980ENSGGOG00000004335PATL19930.691Gorilla_gorilla
ENSPKIG00000016887patl26245.870ENSGGOG00000025923PATL27248.157Gorilla_gorilla
ENSPKIG00000016887patl28464.195ENSHBUG00000005929patl29563.983Haplochromis_burtoni
ENSPKIG00000016887patl25245.663ENSHGLG00000017415-7244.909Heterocephalus_glaber_female
ENSPKIG00000016887patl29432.046ENSHGLG00000018173PATL19831.812Heterocephalus_glaber_female
ENSPKIG00000016887patl29431.858ENSHGLG00100003453PATL19931.953Heterocephalus_glaber_male
ENSPKIG00000016887patl25245.844ENSHGLG00100008419-7245.103Heterocephalus_glaber_male
ENSPKIG00000016887patl210051.719ENSHCOG00000016754patl210051.307Hippocampus_comes
ENSPKIG00000016887patl25537.500ENSHCOG00000001898patl15037.500Hippocampus_comes
ENSPKIG00000016887patl29956.101ENSIPUG00000020692patl29956.101Ictalurus_punctatus
ENSPKIG00000016887patl29431.682ENSSTOG00000013764PATL18732.127Ictidomys_tridecemlineatus
ENSPKIG00000016887patl26145.000ENSSTOG00000033848PATL27247.512Ictidomys_tridecemlineatus
ENSPKIG00000016887patl210052.925ENSKMAG00000021275patl210053.333Kryptolebias_marmoratus
ENSPKIG00000016887patl28358.992ENSLBEG00000022344patl210053.711Labrus_bergylta
ENSPKIG00000016887patl29644.661ENSLACG00000005291-9943.864Latimeria_chalumnae
ENSPKIG00000016887patl25536.253ENSLOCG00000000717patl15236.496Lepisosteus_oculatus
ENSPKIG00000016887patl25546.860ENSLAFG00000031124PATL27146.719Loxodonta_africana
ENSPKIG00000016887patl25236.815ENSLAFG00000015161PATL15436.580Loxodonta_africana
ENSPKIG00000016887patl25536.321ENSMFAG00000040851PATL18632.153Macaca_fascicularis
ENSPKIG00000016887patl26245.987ENSMFAG00000003565PATL27348.284Macaca_fascicularis
ENSPKIG00000016887patl25536.321ENSMMUG00000017287PATL18632.153Macaca_mulatta
ENSPKIG00000016887patl25049.311ENSMMUG00000014294PATL29949.311Macaca_mulatta
ENSPKIG00000016887patl25536.321ENSMNEG00000038692PATL18632.153Macaca_nemestrina
ENSPKIG00000016887patl25847.319ENSMNEG00000034510PATL27347.912Macaca_nemestrina
ENSPKIG00000016887patl26245.652ENSMLEG00000042248PATL27247.912Mandrillus_leucophaeus
ENSPKIG00000016887patl25536.321ENSMLEG00000030044PATL18632.153Mandrillus_leucophaeus
ENSPKIG00000016887patl25537.931ENSMAMG00000003950patl15238.213Mastacembelus_armatus
ENSPKIG00000016887patl28155.575ENSMAMG00000013327patl29851.825Mastacembelus_armatus
ENSPKIG00000016887patl210053.378ENSMZEG00005014292patl210053.189Maylandia_zebra
ENSPKIG00000016887patl28248.226ENSMGAG00000001309PATL29848.631Meleagris_gallopavo
ENSPKIG00000016887patl28631.397ENSMGAG00000003406PATL15038.333Meleagris_gallopavo
ENSPKIG00000016887patl25846.154ENSMAUG00000001008Patl27646.078Mesocricetus_auratus
ENSPKIG00000016887patl25049.030ENSMICG00000005037PATL29949.030Microcebus_murinus
ENSPKIG00000016887patl25746.336ENSMOCG00000015367Patl27447.000Microtus_ochrogaster
ENSPKIG00000016887patl25437.093ENSMMOG00000013711patl15637.093Mola_mola
ENSPKIG00000016887patl28558.628ENSMMOG00000001299patl29758.628Mola_mola
ENSPKIG00000016887patl29430.615ENSMODG00000020201PATL15537.383Monodelphis_domestica
ENSPKIG00000016887patl25847.489ENSMODG00000017690PATL27147.596Monodelphis_domestica
ENSPKIG00000016887patl210054.608ENSMALG00000008131patl29554.357Monopterus_albus
ENSPKIG00000016887patl25338.281ENSMALG00000018706patl15538.442Monopterus_albus
ENSPKIG00000016887patl26041.342MGP_CAROLIEiJ_G0024205Patl27443.659Mus_caroli
ENSPKIG00000016887patl29430.897ENSMUSG00000046139Patl19830.189Mus_musculus
ENSPKIG00000016887patl25941.463ENSMUSG00000027233Patl27143.333Mus_musculus
ENSPKIG00000016887patl25536.342MGP_PahariEiJ_G0014233Patl16434.180Mus_pahari
ENSPKIG00000016887patl26041.886MGP_PahariEiJ_G0025648Patl27444.307Mus_pahari
ENSPKIG00000016887patl26041.215MGP_SPRETEiJ_G0025122Patl27443.521Mus_spretus
ENSPKIG00000016887patl26234.661ENSMPUG00000014607PATL18731.655Mustela_putorius_furo
ENSPKIG00000016887patl26340.000ENSNGAG00000020368Patl27441.602Nannospalax_galili
ENSPKIG00000016887patl28132.012ENSNGAG00000003682Patl18631.114Nannospalax_galili
ENSPKIG00000016887patl29751.989ENSNBRG00000011745patl29752.205Neolamprologus_brichardi
ENSPKIG00000016887patl29430.971ENSNLEG00000013081PATL19930.818Nomascus_leucogenys
ENSPKIG00000016887patl26245.652ENSNLEG00000005673PATL27347.912Nomascus_leucogenys
ENSPKIG00000016887patl25337.940ENSOPRG00000007963PATL16037.594Ochotona_princeps
ENSPKIG00000016887patl210052.815ENSONIG00000011519patl210053.711Oreochromis_niloticus
ENSPKIG00000016887patl25537.931ENSONIG00000004170patl15337.406Oreochromis_niloticus
ENSPKIG00000016887patl25544.660ENSOANG00000001538-8544.444Ornithorhynchus_anatinus
ENSPKIG00000016887patl25437.000ENSOANG00000011117-9636.591Ornithorhynchus_anatinus
ENSPKIG00000016887patl29431.226ENSOCUG00000002156PATL19830.151Oryctolagus_cuniculus
ENSPKIG00000016887patl25547.101ENSOCUG00000006339PATL27247.396Oryctolagus_cuniculus
ENSPKIG00000016887patl28356.975ENSORLG00000005780patl210052.575Oryzias_latipes
ENSPKIG00000016887patl28356.975ENSORLG00020016506patl29752.510Oryzias_latipes_hni
ENSPKIG00000016887patl25439.798ENSORLG00015022240patl15040.050Oryzias_latipes_hsok
ENSPKIG00000016887patl29554.035ENSORLG00015014500patl210053.533Oryzias_latipes_hsok
ENSPKIG00000016887patl210052.362ENSOMEG00000021628patl210051.872Oryzias_melastigma
ENSPKIG00000016887patl25847.344ENSOGAG00000004709PATL27348.293Otolemur_garnettii
ENSPKIG00000016887patl26243.750ENSOARG00000003762PATL27045.573Ovis_aries
ENSPKIG00000016887patl29430.840ENSPPAG00000034275PATL18632.292Pan_paniscus
ENSPKIG00000016887patl26245.435ENSPPAG00000007221PATL27247.666Pan_paniscus
ENSPKIG00000016887patl25847.222ENSPPRG00000004279PATL27348.515Panthera_pardus
ENSPKIG00000016887patl25847.442ENSPTIG00000018964PATL27348.756Panthera_tigris_altaica
ENSPKIG00000016887patl26245.652ENSPTRG00000041536PATL27247.912Pan_troglodytes
ENSPKIG00000016887patl26245.652ENSPANG00000018026PATL27347.912Papio_anubis
ENSPKIG00000016887patl25536.321ENSPANG00000035620PATL18632.153Papio_anubis
ENSPKIG00000016887patl29432.000ENSPSIG00000016206PATL19331.518Pelodiscus_sinensis
ENSPKIG00000016887patl26344.153ENSPSIG00000017690PATL29248.011Pelodiscus_sinensis
ENSPKIG00000016887patl25539.604ENSPMGG00000002644patl15139.604Periophthalmus_magnuspinnatus
ENSPKIG00000016887patl29550.073ENSPMGG00000014550patl29949.275Periophthalmus_magnuspinnatus
ENSPKIG00000016887patl25943.681ENSPEMG00000016509Patl27045.526Peromyscus_maniculatus_bairdii
ENSPKIG00000016887patl29430.238ENSPCIG00000010852PATL19830.538Phascolarctos_cinereus
ENSPKIG00000016887patl26146.358ENSPCIG00000018256PATL27748.477Phascolarctos_cinereus
ENSPKIG00000016887patl25539.901ENSPFOG00000007768patl15139.901Poecilia_formosa
ENSPKIG00000016887patl210054.993ENSPFOG00000007305patl210055.710Poecilia_formosa
ENSPKIG00000016887patl210054.993ENSPLAG00000020713patl210055.463Poecilia_latipinna
ENSPKIG00000016887patl210055.220ENSPMEG00000018942patl210055.710Poecilia_mexicana
ENSPKIG00000016887patl28452.288ENSPREG00000023066patl29851.555Poecilia_reticulata
ENSPKIG00000016887patl25846.620ENSPCOG00000000295PATL29949.311Propithecus_coquereli
ENSPKIG00000016887patl25536.321ENSPCOG00000020770PATL15636.105Propithecus_coquereli
ENSPKIG00000016887patl25533.097ENSPVAG00000015239PATL16233.088Pteropus_vampyrus
ENSPKIG00000016887patl28463.771ENSPNYG00000017381patl29463.559Pundamilia_nyererei
ENSPKIG00000016887patl29957.283ENSPNAG00000002315patl29957.143Pygocentrus_nattereri
ENSPKIG00000016887patl25536.765ENSPNAG00000017907patl15137.745Pygocentrus_nattereri
ENSPKIG00000016887patl25543.855ENSRNOG00000017061Patl27143.896Rattus_norvegicus
ENSPKIG00000016887patl25846.154ENSRBIG00000040369PATL27247.549Rhinopithecus_bieti
ENSPKIG00000016887patl25846.387ENSRROG00000028786PATL27247.794Rhinopithecus_roxellana
ENSPKIG00000016887patl29431.017ENSRROG00000032861PATL18632.153Rhinopithecus_roxellana
ENSPKIG00000016887patl25945.434ENSSBOG00000034766PATL27347.805Saimiri_boliviensis_boliviensis
ENSPKIG00000016887patl29430.709ENSSBOG00000025195PATL18631.121Saimiri_boliviensis_boliviensis
ENSPKIG00000016887patl29430.125ENSSHAG00000004309PATL15437.825Sarcophilus_harrisii
ENSPKIG00000016887patl25539.506ENSSFOG00015009614patl15239.506Scleropages_formosus
ENSPKIG00000016887patl210074.064ENSSFOG00015000720patl210074.619Scleropages_formosus
ENSPKIG00000016887patl29750.897ENSSMAG00000017262patl29964.545Scophthalmus_maximus
ENSPKIG00000016887patl28359.764ENSSDUG00000022927patl210055.951Seriola_dumerili
ENSPKIG00000016887patl28157.534ENSSLDG00000017922patl29953.945Seriola_lalandi_dorsalis
ENSPKIG00000016887patl25535.867ENSSARG00000009600PATL15435.867Sorex_araneus
ENSPKIG00000016887patl25244.501ENSSARG00000009047PATL27444.118Sorex_araneus
ENSPKIG00000016887patl25055.556ENSSPUG00000019065PATL210055.556Sphenodon_punctatus
ENSPKIG00000016887patl29431.425ENSSPUG00000009453PATL19731.017Sphenodon_punctatus
ENSPKIG00000016887patl29552.924ENSSPAG00000004784patl29953.509Stegastes_partitus
ENSPKIG00000016887patl25537.192ENSSPAG00000003187patl15237.685Stegastes_partitus
ENSPKIG00000016887patl25536.019ENSSSCG00000013124PATL19630.988Sus_scrofa
ENSPKIG00000016887patl25437.857ENSTGUG00000006222PATL15337.740Taeniopygia_guttata
ENSPKIG00000016887patl25249.490ENSTGUG00000004619-9549.215Taeniopygia_guttata
ENSPKIG00000016887patl210052.639ENSTRUG00000005647patl210053.699Takifugu_rubripes
ENSPKIG00000016887patl25437.688ENSTRUG00000000709patl15137.940Takifugu_rubripes
ENSPKIG00000016887patl25336.111ENSTTRG00000009389PATL16035.859Tursiops_truncatus
ENSPKIG00000016887patl25847.674ENSUAMG00000018533PATL27148.762Ursus_americanus
ENSPKIG00000016887patl28131.336ENSUMAG00000018634PATL19631.367Ursus_maritimus
ENSPKIG00000016887patl26246.087ENSUMAG00000007738PATL27148.762Ursus_maritimus
ENSPKIG00000016887patl26246.638ENSVVUG00000011576PATL27349.630Vulpes_vulpes
ENSPKIG00000016887patl29430.914ENSVVUG00000016668PATL19631.367Vulpes_vulpes
ENSPKIG00000016887patl28147.293ENSXETG00000014167patl29947.463Xenopus_tropicalis
ENSPKIG00000016887patl25441.013ENSXCOG00000010808patl16940.759Xiphophorus_couchianus
ENSPKIG00000016887patl29754.558ENSXMAG00000018464patl210054.369Xiphophorus_maculatus

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