EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPKIG00000017132 (Gene tree)
Gene ID: 111838044
Gene Symbol: sympk
Alias: -
Full Name: symplekin
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Minus strand
Length: 15847 bases
Position: chrPGUA01000064.1:2061448-2077294
Accession: 111838044
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000040084	Symplekin_C	PF12295.8	3.3e-74	1	1
ENSPKIP00000040042	Symplekin_C	PF12295.8	3.4e-74	1	1
ENSPKIP00000040150	Symplekin_C	PF12295.8	1.7e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000021102	-	4540	XM_023800602	ENSPKIP00000040084	1241 (aa)	XP_023656370	UPI000CD669FE
ENSPKIT00000021168	-	2946	-	ENSPKIP00000040150	981 (aa)	-	-
ENSPKIT00000021060	-	4651	-	ENSPKIP00000040042	1278 (aa)	-	-

Gene Model

Click here to download ENSPKIG00000017132's gene model file

Pathways

Pathway ID	Pathway Name	Source
pki03015	mRNA surveillance pathway	KEGG
pki04530	Tight junction	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000017132's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000017132	sympk	96	72.987	ENSG00000125755	SYMPK	100	81.818	Homo_sapiens
ENSPKIG00000017132	sympk	91	84.493	ENSAPOG00000015934	sympk	98	83.413	Acanthochromis_polyacanthus
ENSPKIG00000017132	sympk	96	72.669	ENSAMEG00000000680	SYMPK	87	76.050	Ailuropoda_melanoleuca
ENSPKIG00000017132	sympk	88	85.192	ENSACIG00000006357	sympk	92	85.009	Amphilophus_citrinellus
ENSPKIG00000017132	sympk	94	83.048	ENSAOCG00000024124	sympk	92	85.505	Amphiprion_ocellaris
ENSPKIG00000017132	sympk	94	83.219	ENSAPEG00000003465	sympk	92	84.317	Amphiprion_percula
ENSPKIG00000017132	sympk	98	80.276	ENSATEG00000008472	sympk	99	79.935	Anabas_testudineus
ENSPKIG00000017132	sympk	81	74.801	ENSACAG00000004126	SYMPK	83	74.502	Anolis_carolinensis
ENSPKIG00000017132	sympk	96	72.987	ENSANAG00000021087	SYMPK	99	76.399	Aotus_nancymaae
ENSPKIG00000017132	sympk	91	84.053	ENSACLG00000001813	sympk	99	78.548	Astatotilapia_calliptera
ENSPKIG00000017132	sympk	96	80.255	ENSAMXG00000013677	sympk	90	85.536	Astyanax_mexicanus
ENSPKIG00000017132	sympk	96	72.564	ENSBTAG00000012101	SYMPK	87	75.961	Bos_taurus
ENSPKIG00000017132	sympk	90	30.444	WBGene00017797	symk-1	79	30.444	Caenorhabditis_elegans
ENSPKIG00000017132	sympk	96	72.881	ENSCJAG00000012172	SYMPK	99	74.720	Callithrix_jacchus
ENSPKIG00000017132	sympk	96	72.775	ENSCAFG00000004376	SYMPK	87	76.139	Canis_familiaris
ENSPKIG00000017132	sympk	96	72.775	ENSCAFG00020001815	SYMPK	87	76.139	Canis_lupus_dingo
ENSPKIG00000017132	sympk	96	72.669	ENSCHIG00000026784	SYMPK	87	76.050	Capra_hircus
ENSPKIG00000017132	sympk	96	72.564	ENSTSYG00000006268	SYMPK	95	73.777	Carlito_syrichta
ENSPKIG00000017132	sympk	96	72.881	ENSCAPG00000005112	SYMPK	96	74.074	Cavia_aperea
ENSPKIG00000017132	sympk	96	72.881	ENSCPOG00000010434	SYMPK	89	76.229	Cavia_porcellus
ENSPKIG00000017132	sympk	96	72.987	ENSCCAG00000036309	SYMPK	99	76.177	Cebus_capucinus
ENSPKIG00000017132	sympk	96	72.987	ENSCATG00000045107	SYMPK	99	76.411	Cercocebus_atys
ENSPKIG00000017132	sympk	96	72.669	ENSCLAG00000001206	SYMPK	87	76.050	Chinchilla_lanigera
ENSPKIG00000017132	sympk	96	72.987	ENSCSAG00000003115	SYMPK	87	76.565	Chlorocebus_sabaeus
ENSPKIG00000017132	sympk	78	90.909	ENSCHOG00000012456	SYMPK	81	90.909	Choloepus_hoffmanni
ENSPKIG00000017132	sympk	96	72.029	ENSCPBG00000007170	SYMPK	89	75.893	Chrysemys_picta_bellii
ENSPKIG00000017132	sympk	90	44.916	ENSCING00000021232	-	96	48.465	Ciona_intestinalis
ENSPKIG00000017132	sympk	88	45.805	ENSCSAVG00000005154	-	100	48.124	Ciona_savignyi
ENSPKIG00000017132	sympk	96	72.275	ENSCANG00000040907	SYMPK	99	74.702	Colobus_angolensis_palliatus
ENSPKIG00000017132	sympk	84	77.182	ENSCGRG00001010086	Sympk	83	78.973	Cricetulus_griseus_chok1gshd
ENSPKIG00000017132	sympk	98	79.024	ENSCSEG00000016802	sympk	99	78.798	Cynoglossus_semilaevis
ENSPKIG00000017132	sympk	98	77.742	ENSDARG00000059553	sympk	88	83.348	Danio_rerio
ENSPKIG00000017132	sympk	96	72.352	ENSDNOG00000016149	SYMPK	86	75.671	Dasypus_novemcinctus
ENSPKIG00000017132	sympk	93	33.511	FBgn0037371	Sym	92	36.207	Drosophila_melanogaster
ENSPKIG00000017132	sympk	68	59.516	ENSEBUG00000000387	sympk	88	58.830	Eptatretus_burgeri
ENSPKIG00000017132	sympk	96	72.775	ENSEASG00005014227	SYMPK	87	76.139	Equus_asinus_asinus
ENSPKIG00000017132	sympk	96	72.775	ENSECAG00000008163	SYMPK	87	76.139	Equus_caballus
ENSPKIG00000017132	sympk	74	80.296	ENSEEUG00000000270	-	81	74.930	Erinaceus_europaeus
ENSPKIG00000017132	sympk	96	81.395	ENSELUG00000000850	sympk	100	78.251	Esox_lucius
ENSPKIG00000017132	sympk	96	72.775	ENSFCAG00000007337	SYMPK	87	76.139	Felis_catus
ENSPKIG00000017132	sympk	96	72.669	ENSFDAG00000011272	SYMPK	87	76.118	Fukomys_damarensis
ENSPKIG00000017132	sympk	90	84.097	ENSFHEG00000010274	sympk	90	84.517	Fundulus_heteroclitus
ENSPKIG00000017132	sympk	92	79.029	ENSGMOG00000002357	sympk	99	82.505	Gadus_morhua
ENSPKIG00000017132	sympk	98	77.641	ENSGAFG00000010976	sympk	97	77.433	Gambusia_affinis
ENSPKIG00000017132	sympk	93	81.818	ENSGACG00000002735	sympk	98	83.862	Gasterosteus_aculeatus
ENSPKIG00000017132	sympk	57	74.929	ENSGAGG00000012538	-	88	74.135	Gopherus_agassizii
ENSPKIG00000017132	sympk	96	72.987	ENSGGOG00000003410	SYMPK	97	75.900	Gorilla_gorilla
ENSPKIG00000017132	sympk	91	84.141	ENSHBUG00000023564	sympk	99	78.629	Haplochromis_burtoni
ENSPKIG00000017132	sympk	96	69.958	ENSHGLG00000005228	SYMPK	87	72.118	Heterocephalus_glaber_female
ENSPKIG00000017132	sympk	96	72.987	ENSHGLG00100018571	SYMPK	89	76.318	Heterocephalus_glaber_male
ENSPKIG00000017132	sympk	88	79.053	ENSHCOG00000017400	sympk	91	78.415	Hippocampus_comes
ENSPKIG00000017132	sympk	100	77.567	ENSIPUG00000024020	SYMPK	100	77.751	Ictalurus_punctatus
ENSPKIG00000017132	sympk	96	73.199	ENSSTOG00000001534	SYMPK	87	76.497	Ictidomys_tridecemlineatus
ENSPKIG00000017132	sympk	96	72.669	ENSJJAG00000006633	Sympk	87	76.229	Jaculus_jaculus
ENSPKIG00000017132	sympk	93	80.543	ENSKMAG00000016292	sympk	90	84.011	Kryptolebias_marmoratus
ENSPKIG00000017132	sympk	94	80.236	ENSLBEG00000027913	sympk	98	80.348	Labrus_bergylta
ENSPKIG00000017132	sympk	96	68.110	ENSLACG00000016497	SYMPK	93	70.667	Latimeria_chalumnae
ENSPKIG00000017132	sympk	96	73.093	ENSLAFG00000008726	SYMPK	87	76.318	Loxodonta_africana
ENSPKIG00000017132	sympk	96	72.987	ENSMMUG00000015428	SYMPK	93	74.422	Macaca_mulatta
ENSPKIG00000017132	sympk	96	72.881	ENSMNEG00000019439	SYMPK	99	76.318	Macaca_nemestrina
ENSPKIG00000017132	sympk	96	72.987	ENSMLEG00000040508	SYMPK	99	76.411	Mandrillus_leucophaeus
ENSPKIG00000017132	sympk	94	82.904	ENSMAMG00000010486	sympk	97	80.648	Mastacembelus_armatus
ENSPKIG00000017132	sympk	91	84.053	ENSMZEG00005014146	sympk	99	78.548	Maylandia_zebra
ENSPKIG00000017132	sympk	96	72.458	ENSMAUG00000015657	Sympk	86	75.429	Mesocricetus_auratus
ENSPKIG00000017132	sympk	96	72.458	ENSMICG00000001871	SYMPK	92	74.335	Microcebus_murinus
ENSPKIG00000017132	sympk	96	72.775	ENSMOCG00000008388	Sympk	86	76.139	Microtus_ochrogaster
ENSPKIG00000017132	sympk	93	81.365	ENSMMOG00000019227	sympk	93	82.865	Mola_mola
ENSPKIG00000017132	sympk	96	72.392	ENSMODG00000021534	SYMPK	87	75.868	Monodelphis_domestica
ENSPKIG00000017132	sympk	93	76.656	ENSMALG00000008347	sympk	97	80.713	Monopterus_albus
ENSPKIG00000017132	sympk	96	72.564	MGP_CAROLIEiJ_G0029267	Sympk	77	87.156	Mus_caroli
ENSPKIG00000017132	sympk	96	72.458	ENSMUSG00000023118	Sympk	76	87.156	Mus_musculus
ENSPKIG00000017132	sympk	96	72.458	MGP_PahariEiJ_G0021127	Sympk	77	87.156	Mus_pahari
ENSPKIG00000017132	sympk	96	72.564	MGP_SPRETEiJ_G0030351	-	77	87.156	Mus_spretus
ENSPKIG00000017132	sympk	96	71.186	ENSMPUG00000005505	SYMPK	86	74.799	Mustela_putorius_furo
ENSPKIG00000017132	sympk	72	73.767	ENSMLUG00000001359	SYMPK	88	73.124	Myotis_lucifugus
ENSPKIG00000017132	sympk	96	72.352	ENSNGAG00000000820	Sympk	87	75.850	Nannospalax_galili
ENSPKIG00000017132	sympk	88	84.826	ENSNBRG00000018101	sympk	92	85.093	Neolamprologus_brichardi
ENSPKIG00000017132	sympk	83	71.045	ENSNLEG00000002369	SYMPK	85	70.763	Nomascus_leucogenys
ENSPKIG00000017132	sympk	71	93.333	ENSMEUG00000003866	SYMPK	69	86.192	Notamacropus_eugenii
ENSPKIG00000017132	sympk	96	72.775	ENSOPRG00000009967	SYMPK	86	74.396	Ochotona_princeps
ENSPKIG00000017132	sympk	96	72.352	ENSODEG00000007519	SYMPK	87	75.961	Octodon_degus
ENSPKIG00000017132	sympk	90	84.145	ENSONIG00000016802	sympk	96	84.498	Oreochromis_niloticus
ENSPKIG00000017132	sympk	96	72.775	ENSOCUG00000005511	SYMPK	90	74.566	Oryctolagus_cuniculus
ENSPKIG00000017132	sympk	93	81.114	ENSORLG00000015338	sympk	96	83.579	Oryzias_latipes
ENSPKIG00000017132	sympk	93	81.004	ENSORLG00020004402	sympk	90	84.574	Oryzias_latipes_hni
ENSPKIG00000017132	sympk	93	80.895	ENSORLG00015005712	sympk	90	84.483	Oryzias_latipes_hsok
ENSPKIG00000017132	sympk	93	82.470	ENSOMEG00000022561	sympk	99	79.279	Oryzias_melastigma
ENSPKIG00000017132	sympk	96	72.881	ENSOGAG00000013483	SYMPK	87	76.318	Otolemur_garnettii
ENSPKIG00000017132	sympk	96	69.789	ENSOARG00000010349	SYMPK	87	73.053	Ovis_aries
ENSPKIG00000017132	sympk	96	72.987	ENSPPAG00000043204	SYMPK	94	74.049	Pan_paniscus
ENSPKIG00000017132	sympk	96	72.775	ENSPPRG00000004282	SYMPK	87	76.139	Panthera_pardus
ENSPKIG00000017132	sympk	96	72.775	ENSPTIG00000015420	SYMPK	93	76.139	Panthera_tigris_altaica
ENSPKIG00000017132	sympk	96	72.987	ENSPTRG00000011169	SYMPK	94	74.049	Pan_troglodytes
ENSPKIG00000017132	sympk	96	72.987	ENSPANG00000019930	SYMPK	99	76.411	Papio_anubis
ENSPKIG00000017132	sympk	96	72.669	ENSPEMG00000007564	Sympk	86	76.029	Peromyscus_maniculatus_bairdii
ENSPKIG00000017132	sympk	83	64.559	ENSPMAG00000004936	sympk	100	64.559	Petromyzon_marinus
ENSPKIG00000017132	sympk	97	71.937	ENSPCIG00000024476	SYMPK	91	73.316	Phascolarctos_cinereus
ENSPKIG00000017132	sympk	91	82.743	ENSPFOG00000001194	sympk	90	83.529	Poecilia_formosa
ENSPKIG00000017132	sympk	91	82.743	ENSPLAG00000012995	sympk	90	83.529	Poecilia_latipinna
ENSPKIG00000017132	sympk	91	82.743	ENSPMEG00000008099	sympk	90	83.529	Poecilia_mexicana
ENSPKIG00000017132	sympk	89	83.243	ENSPREG00000006176	sympk	90	83.152	Poecilia_reticulata
ENSPKIG00000017132	sympk	96	72.987	ENSPPYG00000010135	SYMPK	99	76.050	Pongo_abelii
ENSPKIG00000017132	sympk	84	81.034	ENSPCAG00000005182	SYMPK	80	79.233	Procavia_capensis
ENSPKIG00000017132	sympk	96	72.458	ENSPCOG00000023740	SYMPK	99	75.671	Propithecus_coquereli
ENSPKIG00000017132	sympk	96	70.869	ENSPVAG00000001355	SYMPK	89	74.620	Pteropus_vampyrus
ENSPKIG00000017132	sympk	91	84.141	ENSPNYG00000011455	sympk	90	84.389	Pundamilia_nyererei
ENSPKIG00000017132	sympk	99	79.984	ENSPNAG00000016505	sympk	89	86.518	Pygocentrus_nattereri
ENSPKIG00000017132	sympk	96	72.669	ENSRNOG00000014353	Sympk	86	75.961	Rattus_norvegicus
ENSPKIG00000017132	sympk	96	72.987	ENSRBIG00000040963	SYMPK	99	76.636	Rhinopithecus_bieti
ENSPKIG00000017132	sympk	96	72.987	ENSRROG00000024834	SYMPK	97	76.273	Rhinopithecus_roxellana
ENSPKIG00000017132	sympk	96	72.881	ENSSBOG00000034497	SYMPK	95	74.049	Saimiri_boliviensis_boliviensis
ENSPKIG00000017132	sympk	95	71.036	ENSSHAG00000003139	SYMPK	96	74.799	Sarcophilus_harrisii
ENSPKIG00000017132	sympk	100	87.369	ENSSFOG00015006974	sympk	100	86.967	Scleropages_formosus
ENSPKIG00000017132	sympk	93	82.388	ENSSMAG00000018130	sympk	72	84.657	Scophthalmus_maximus
ENSPKIG00000017132	sympk	98	80.424	ENSSDUG00000007092	sympk	90	85.392	Seriola_dumerili
ENSPKIG00000017132	sympk	98	80.327	ENSSLDG00000014774	sympk	96	83.160	Seriola_lalandi_dorsalis
ENSPKIG00000017132	sympk	56	86.154	ENSSARG00000004274	-	59	86.154	Sorex_araneus
ENSPKIG00000017132	sympk	96	71.730	ENSSPUG00000002789	SYMPK	85	74.978	Sphenodon_punctatus
ENSPKIG00000017132	sympk	91	84.243	ENSSPAG00000000854	sympk	92	84.419	Stegastes_partitus
ENSPKIG00000017132	sympk	96	72.987	ENSSSCG00000003093	SYMPK	87	76.318	Sus_scrofa
ENSPKIG00000017132	sympk	93	80.568	ENSTRUG00000010202	sympk	91	83.559	Takifugu_rubripes
ENSPKIG00000017132	sympk	93	79.415	ENSTNIG00000017855	sympk	97	83.547	Tetraodon_nigroviridis
ENSPKIG00000017132	sympk	82	100.000	ENSTBEG00000000454	SYMPK	77	88.312	Tupaia_belangeri
ENSPKIG00000017132	sympk	90	68.157	ENSTTRG00000014311	SYMPK	87	67.650	Tursiops_truncatus
ENSPKIG00000017132	sympk	98	71.414	ENSUAMG00000022272	SYMPK	95	73.872	Ursus_americanus
ENSPKIG00000017132	sympk	96	72.669	ENSUMAG00000023698	SYMPK	87	76.050	Ursus_maritimus
ENSPKIG00000017132	sympk	96	72.775	ENSVVUG00000003024	SYMPK	96	76.139	Vulpes_vulpes
ENSPKIG00000017132	sympk	94	67.669	ENSXETG00000024453	sympk	90	70.455	Xenopus_tropicalis
ENSPKIG00000017132	sympk	92	78.319	ENSXCOG00000015368	sympk	99	82.380	Xiphophorus_couchianus
ENSPKIG00000017132	sympk	91	82.566	ENSXMAG00000005737	sympk	90	83.439	Xiphophorus_maculatus