EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPKIG00000017233 (Gene tree)
Gene ID: 111854779
Gene Symbol: SRRM3
Alias: -
Full Name: serine/arginine repetitive matrix 3
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Minus strand
Length: 80518 bases
Position: chrPGUA01000029.1:1192367-1272884
Accession: 111854779
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000040182	cwf21	PF08312.12	4e-15	1	1
ENSPKIP00000040153	cwf21	PF08312.12	4.5e-15	1	1
ENSPKIP00000040182	SRRM_C	PF15230.6	1.1e-21	1	1
ENSPKIP00000040153	SRRM_C	PF15230.6	5.3e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000021200	SRRM3-202	4260	XM_023833125	ENSPKIP00000040182	604 (aa)	XP_023688893	UPI000CD5FD07
ENSPKIT00000021171	SRRM3-201	4395	XM_023833121	ENSPKIP00000040153	649 (aa)	XP_023688889	UPI000CD6043E

Gene Model

Click here to download ENSPKIG00000017233's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000017233's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000017233	SRRM3	92	53.547	ENSAPOG00000000288	SRRM3	87	53.390	Acanthochromis_polyacanthus
ENSPKIG00000017233	SRRM3	97	53.462	ENSACLG00000005269	SRRM3	87	52.641	Astatotilapia_calliptera
ENSPKIG00000017233	SRRM3	92	55.439	ENSAMXG00000016051	-	87	55.670	Astyanax_mexicanus
ENSPKIG00000017233	SRRM3	91	46.599	ENSCAFG00000013537	SRRM3	88	49.144	Canis_familiaris
ENSPKIG00000017233	SRRM3	59	58.519	ENSCLAG00000007682	SRRM3	88	72.477	Chinchilla_lanigera
ENSPKIG00000017233	SRRM3	91	50.764	ENSCPBG00000027784	SRRM3	90	50.342	Chrysemys_picta_bellii
ENSPKIG00000017233	SRRM3	92	51.186	ENSCSEG00000010978	-	80	52.782	Cynoglossus_semilaevis
ENSPKIG00000017233	SRRM3	92	51.864	ENSGAFG00000014777	SRRM3	87	51.795	Gambusia_affinis
ENSPKIG00000017233	SRRM3	92	50.512	ENSGAGG00000021058	SRRM3	96	49.043	Gopherus_agassizii
ENSPKIG00000017233	SRRM3	97	53.548	ENSHBUG00000005061	SRRM3	87	53.152	Haplochromis_burtoni
ENSPKIG00000017233	SRRM3	84	55.556	ENSIPUG00000012467	srrm3	87	53.484	Ictalurus_punctatus
ENSPKIG00000017233	SRRM3	57	59.906	ENSSTOG00000014181	SRRM3	88	75.229	Ictidomys_tridecemlineatus
ENSPKIG00000017233	SRRM3	93	50.746	ENSKMAG00000013495	SRRM3	87	51.342	Kryptolebias_marmoratus
ENSPKIG00000017233	SRRM3	83	45.083	ENSLACG00000008008	SRRM3	96	44.549	Latimeria_chalumnae
ENSPKIG00000017233	SRRM3	53	71.739	ENSLOCG00000002879	SRRM3	96	71.429	Lepisosteus_oculatus
ENSPKIG00000017233	SRRM3	54	58.333	ENSMGAG00000003690	SRRM3	87	58.112	Meleagris_gallopavo
ENSPKIG00000017233	SRRM3	94	52.718	ENSMALG00000000844	-	89	51.864	Monopterus_albus
ENSPKIG00000017233	SRRM3	92	49.589	ENSONIG00000012732	-	50	58.249	Oreochromis_niloticus
ENSPKIG00000017233	SRRM3	92	51.092	ENSORLG00000026242	-	89	50.934	Oryzias_latipes
ENSPKIG00000017233	SRRM3	92	50.671	ENSORLG00020016592	-	89	50.424	Oryzias_latipes_hni
ENSPKIG00000017233	SRRM3	92	50.334	ENSORLG00015022712	SRRM3	89	50.759	Oryzias_latipes_hsok
ENSPKIG00000017233	SRRM3	92	52.413	ENSOMEG00000010768	-	96	49.534	Oryzias_melastigma
ENSPKIG00000017233	SRRM3	61	54.762	ENSPPRG00000006254	SRRM3	86	44.348	Panthera_pardus
ENSPKIG00000017233	SRRM3	57	51.374	ENSPSIG00000007850	SRRM3	95	44.839	Pelodiscus_sinensis
ENSPKIG00000017233	SRRM3	92	52.901	ENSPMEG00000011981	-	87	52.730	Poecilia_mexicana
ENSPKIG00000017233	SRRM3	92	52.277	ENSPREG00000008138	-	87	52.773	Poecilia_reticulata
ENSPKIG00000017233	SRRM3	92	56.098	ENSPNAG00000009621	SRRM3	87	57.068	Pygocentrus_nattereri
ENSPKIG00000017233	SRRM3	67	68.780	ENSSFOG00015001696	SRRM3	98	68.856	Scleropages_formosus
ENSPKIG00000017233	SRRM3	92	53.220	ENSSMAG00000000476	SRRM3	88	54.392	Scophthalmus_maximus
ENSPKIG00000017233	SRRM3	92	53.630	ENSSLDG00000020070	SRRM3	87	53.783	Seriola_lalandi_dorsalis
ENSPKIG00000017233	SRRM3	85	45.196	ENSTNIG00000008549	-	85	45.848	Tetraodon_nigroviridis
ENSPKIG00000017233	SRRM3	92	51.783	ENSXMAG00000005663	-	87	51.624	Xiphophorus_maculatus