EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000017246 (Gene tree)
Gene ID: 111841582
Gene Symbol: si:dkey-37o8.1
Alias: -
Full Name: elongation factor 1-alpha-like
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Minus strand
Length: 2711 bases
Position: chrPGUA01000086.1:507719-510429
Accession: 111841582
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000040187	GTP_EFTU	PF00009.27	2.6e-55	1	1
ENSPKIP00000040187	MMR_HSR1	PF01926.23	4.2e-07	1	1
ENSPKIP00000040187	GTP_EFTU_D2	PF03144.25	2.5e-10	1	1
ENSPKIP00000040187	GTP_EFTU_D3	PF03143.17	4.6e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000021206	-	2205	-	ENSPKIP00000040187	459 (aa)	XP_023663193	UPI000CD663BD

Gene Model

Click here to download ENSPKIG00000017246's gene model file

Pathways

Pathway ID	Pathway Name	Source
pki03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000017246's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000017246	si:dkey-37o8.1	99	71.711	ENSPKIG00000002973	eef1a1b	99	71.711
ENSPKIG00000017246	si:dkey-37o8.1	97	72.009	ENSPKIG00000022865	-	96	72.009
ENSPKIG00000017246	si:dkey-37o8.1	95	38.710	ENSPKIG00000023171	hbs1l	68	38.710
ENSPKIG00000017246	si:dkey-37o8.1	97	72.235	ENSPKIG00000021856	eef1a2	96	72.235
ENSPKIG00000017246	si:dkey-37o8.1	96	37.415	ENSPKIG00000022644	gspt1	74	37.415

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000017246	si:dkey-37o8.1	99	83.736	ENSAPOG00000016459	si:dkey-37o8.1	99	83.736	Acanthochromis_polyacanthus
ENSPKIG00000017246	si:dkey-37o8.1	95	80.778	ENSACIG00000020985	si:dkey-37o8.1	82	80.778	Amphilophus_citrinellus
ENSPKIG00000017246	si:dkey-37o8.1	100	83.660	ENSAOCG00000002663	si:dkey-37o8.1	100	83.660	Amphiprion_ocellaris
ENSPKIG00000017246	si:dkey-37o8.1	100	83.878	ENSAPEG00000012670	si:dkey-37o8.1	100	83.878	Amphiprion_percula
ENSPKIG00000017246	si:dkey-37o8.1	92	84.597	ENSATEG00000002217	si:dkey-37o8.1	99	84.597	Anabas_testudineus
ENSPKIG00000017246	si:dkey-37o8.1	97	84.199	ENSACLG00000003519	si:dkey-37o8.1	97	84.199	Astatotilapia_calliptera
ENSPKIG00000017246	si:dkey-37o8.1	100	86.275	ENSAMXG00000002728	si:dkey-37o8.1	100	86.275	Astyanax_mexicanus
ENSPKIG00000017246	si:dkey-37o8.1	96	74.318	ENSCPBG00000020570	-	87	74.208	Chrysemys_picta_bellii
ENSPKIG00000017246	si:dkey-37o8.1	99	78.556	ENSCSEG00000019807	si:dkey-37o8.1	99	77.922	Cynoglossus_semilaevis
ENSPKIG00000017246	si:dkey-37o8.1	99	83.114	ENSCVAG00000009828	si:dkey-37o8.1	99	83.114	Cyprinodon_variegatus
ENSPKIG00000017246	si:dkey-37o8.1	100	81.481	ENSDARG00000071727	si:dkey-37o8.1	95	81.481	Danio_rerio
ENSPKIG00000017246	si:dkey-37o8.1	100	83.007	ENSELUG00000007495	si:dkey-37o8.1	100	83.007	Esox_lucius
ENSPKIG00000017246	si:dkey-37o8.1	100	81.917	ENSFHEG00000017452	si:dkey-37o8.1	100	81.917	Fundulus_heteroclitus
ENSPKIG00000017246	si:dkey-37o8.1	97	77.878	ENSGMOG00000006122	si:dkey-37o8.1	98	77.878	Gadus_morhua
ENSPKIG00000017246	si:dkey-37o8.1	98	76.940	ENSGAFG00000000367	si:dkey-37o8.1	100	76.940	Gambusia_affinis
ENSPKIG00000017246	si:dkey-37o8.1	100	80.392	ENSGACG00000004505	si:dkey-37o8.1	100	80.392	Gasterosteus_aculeatus
ENSPKIG00000017246	si:dkey-37o8.1	96	75.339	ENSGAGG00000007724	-	93	79.439	Gopherus_agassizii
ENSPKIG00000017246	si:dkey-37o8.1	97	84.424	ENSHBUG00000015515	si:dkey-37o8.1	97	84.424	Haplochromis_burtoni
ENSPKIG00000017246	si:dkey-37o8.1	97	75.847	ENSHCOG00000001215	si:dkey-37o8.1	98	75.847	Hippocampus_comes
ENSPKIG00000017246	si:dkey-37o8.1	99	84.868	ENSIPUG00000004067	si:dkey-37o8.1	99	84.868	Ictalurus_punctatus
ENSPKIG00000017246	si:dkey-37o8.1	100	81.481	ENSKMAG00000015910	si:dkey-37o8.1	100	81.481	Kryptolebias_marmoratus
ENSPKIG00000017246	si:dkey-37o8.1	100	83.442	ENSLBEG00000021334	si:dkey-37o8.1	90	83.442	Labrus_bergylta
ENSPKIG00000017246	si:dkey-37o8.1	97	78.475	ENSLACG00000003948	si:dkey-37o8.1	97	78.475	Latimeria_chalumnae
ENSPKIG00000017246	si:dkey-37o8.1	99	83.114	ENSLOCG00000011245	si:dkey-37o8.1	99	83.114	Lepisosteus_oculatus
ENSPKIG00000017246	si:dkey-37o8.1	97	72.009	ENSMAMG00000009907	si:dkey-37o8.1	93	72.009	Mastacembelus_armatus
ENSPKIG00000017246	si:dkey-37o8.1	97	84.199	ENSMZEG00005018358	si:dkey-37o8.1	97	84.199	Maylandia_zebra
ENSPKIG00000017246	si:dkey-37o8.1	99	81.498	ENSMMOG00000004111	si:dkey-37o8.1	99	81.498	Mola_mola
ENSPKIG00000017246	si:dkey-37o8.1	95	77.626	ENSMALG00000017152	si:dkey-37o8.1	99	77.626	Monopterus_albus
ENSPKIG00000017246	si:dkey-37o8.1	97	84.199	ENSNBRG00000013552	si:dkey-37o8.1	97	84.199	Neolamprologus_brichardi
ENSPKIG00000017246	si:dkey-37o8.1	97	83.521	ENSONIG00000006165	si:dkey-37o8.1	97	83.521	Oreochromis_niloticus
ENSPKIG00000017246	si:dkey-37o8.1	100	82.353	ENSORLG00000019066	si:dkey-37o8.1	100	82.353	Oryzias_latipes
ENSPKIG00000017246	si:dkey-37o8.1	100	82.353	ENSORLG00020008094	si:dkey-37o8.1	100	82.353	Oryzias_latipes_hni
ENSPKIG00000017246	si:dkey-37o8.1	100	82.353	ENSORLG00015008410	si:dkey-37o8.1	100	82.353	Oryzias_latipes_hsok
ENSPKIG00000017246	si:dkey-37o8.1	99	83.151	ENSOMEG00000001868	si:dkey-37o8.1	100	83.151	Oryzias_melastigma
ENSPKIG00000017246	si:dkey-37o8.1	57	68.421	ENSPSIG00000008080	-	94	68.421	Pelodiscus_sinensis
ENSPKIG00000017246	si:dkey-37o8.1	100	82.571	ENSPFOG00000013173	si:dkey-37o8.1	100	82.571	Poecilia_formosa
ENSPKIG00000017246	si:dkey-37o8.1	100	82.135	ENSPLAG00000010405	si:dkey-37o8.1	100	82.135	Poecilia_latipinna
ENSPKIG00000017246	si:dkey-37o8.1	100	82.571	ENSPMEG00000015233	si:dkey-37o8.1	100	82.571	Poecilia_mexicana
ENSPKIG00000017246	si:dkey-37o8.1	99	82.018	ENSPREG00000006280	si:dkey-37o8.1	100	82.018	Poecilia_reticulata
ENSPKIG00000017246	si:dkey-37o8.1	97	83.521	ENSPNYG00000002059	si:dkey-37o8.1	97	83.521	Pundamilia_nyererei
ENSPKIG00000017246	si:dkey-37o8.1	100	85.403	ENSPNAG00000009990	si:dkey-37o8.1	100	85.526	Pygocentrus_nattereri
ENSPKIG00000017246	si:dkey-37o8.1	97	89.686	ENSSFOG00015019070	si:dkey-37o8.1	98	89.686	Scleropages_formosus
ENSPKIG00000017246	si:dkey-37o8.1	97	83.973	ENSSMAG00000016143	si:dkey-37o8.1	97	83.973	Scophthalmus_maximus
ENSPKIG00000017246	si:dkey-37o8.1	100	82.789	ENSSDUG00000009163	si:dkey-37o8.1	100	82.789	Seriola_dumerili
ENSPKIG00000017246	si:dkey-37o8.1	100	82.571	ENSSLDG00000023761	si:dkey-37o8.1	100	82.571	Seriola_lalandi_dorsalis
ENSPKIG00000017246	si:dkey-37o8.1	96	73.804	ENSSPUG00000007467	-	96	73.804	Sphenodon_punctatus
ENSPKIG00000017246	si:dkey-37o8.1	98	84.701	ENSSPAG00000013856	si:dkey-37o8.1	98	84.701	Stegastes_partitus
ENSPKIG00000017246	si:dkey-37o8.1	96	83.409	ENSTRUG00000009006	si:dkey-37o8.1	98	83.409	Takifugu_rubripes
ENSPKIG00000017246	si:dkey-37o8.1	97	83.747	ENSTNIG00000017138	si:dkey-37o8.1	95	83.747	Tetraodon_nigroviridis
ENSPKIG00000017246	si:dkey-37o8.1	96	76.765	ENSXETG00000017744	42Sp50	95	76.765	Xenopus_tropicalis
ENSPKIG00000017246	si:dkey-37o8.1	99	82.237	ENSXCOG00000012296	si:dkey-37o8.1	100	86.813	Xiphophorus_couchianus
ENSPKIG00000017246	si:dkey-37o8.1	100	82.353	ENSXMAG00000001998	si:dkey-37o8.1	100	82.353	Xiphophorus_maculatus