EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000017259 (Gene tree)
Gene ID: 111847445
Gene Symbol: prpf4
Alias: -
Full Name: pre-mRNA processing factor 4
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Minus strand
Length: 9142 bases
Position: chrPGUA01000170.1:163829-172970
Accession: 111847445
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000040200	PRP4	PF08799.11	2.9e-13	1	1
ENSPKIP00000040224	PRP4	PF08799.11	3.2e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000021218	-	3956	-	ENSPKIP00000040200	506 (aa)	XP_023674390	UPI000CD64C44
ENSPKIT00000021243	-	4023	-	ENSPKIP00000040224	546 (aa)	-	-

Gene Model

Click here to download ENSPKIG00000017259's gene model file

Pathways

Pathway ID	Pathway Name	Source
pki03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000017259's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000017259	prpf4	58	32.927	ENSPKIG00000000136	tbl3	59	32.927
ENSPKIG00000017259	prpf4	55	31.214	ENSPKIG00000012667	wdr61	97	31.707

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000017259	prpf4	99	81.386	ENSG00000136875	PRPF4	97	81.386	Homo_sapiens
ENSPKIG00000017259	prpf4	99	81.159	ENSAPOG00000014132	prpf4	99	81.159	Acanthochromis_polyacanthus
ENSPKIG00000017259	prpf4	99	81.188	ENSAMEG00000013048	PRPF4	95	81.188	Ailuropoda_melanoleuca
ENSPKIG00000017259	prpf4	100	81.569	ENSACIG00000005579	prpf4	100	81.569	Amphilophus_citrinellus
ENSPKIG00000017259	prpf4	100	80.980	ENSAOCG00000005457	prpf4	100	80.980	Amphiprion_ocellaris
ENSPKIG00000017259	prpf4	100	80.784	ENSAPEG00000000776	prpf4	100	80.784	Amphiprion_percula
ENSPKIG00000017259	prpf4	100	81.373	ENSATEG00000023013	prpf4	100	81.373	Anabas_testudineus
ENSPKIG00000017259	prpf4	99	81.782	ENSAPLG00000006534	PRPF4	94	81.782	Anas_platyrhynchos
ENSPKIG00000017259	prpf4	99	82.087	ENSACAG00000015110	PRPF4	97	82.087	Anolis_carolinensis
ENSPKIG00000017259	prpf4	99	81.188	ENSANAG00000022464	PRPF4	93	81.188	Aotus_nancymaae
ENSPKIG00000017259	prpf4	100	80.980	ENSACLG00000019031	prpf4	100	80.980	Astatotilapia_calliptera
ENSPKIG00000017259	prpf4	100	66.922	ENSAMXG00000006756	prpf4	100	81.854	Astyanax_mexicanus
ENSPKIG00000017259	prpf4	99	81.188	ENSBTAG00000004571	PRPF4	97	81.188	Bos_taurus
ENSPKIG00000017259	prpf4	94	44.770	WBGene00007972	prp-4	96	44.770	Caenorhabditis_elegans
ENSPKIG00000017259	prpf4	99	81.188	ENSCJAG00000017856	PRPF4	97	81.188	Callithrix_jacchus
ENSPKIG00000017259	prpf4	99	81.188	ENSCAFG00000003224	PRPF4	94	81.188	Canis_familiaris
ENSPKIG00000017259	prpf4	99	81.188	ENSCAFG00020022637	PRPF4	97	81.188	Canis_lupus_dingo
ENSPKIG00000017259	prpf4	99	80.990	ENSCHIG00000024648	-	97	80.990	Capra_hircus
ENSPKIG00000017259	prpf4	99	80.990	ENSTSYG00000010366	PRPF4	97	80.990	Carlito_syrichta
ENSPKIG00000017259	prpf4	91	74.224	ENSCAPG00000008935	PRPF4	97	74.224	Cavia_aperea
ENSPKIG00000017259	prpf4	99	80.792	ENSCPOG00000010747	-	97	80.792	Cavia_porcellus
ENSPKIG00000017259	prpf4	99	75.842	ENSCPOG00000014729	-	97	75.842	Cavia_porcellus
ENSPKIG00000017259	prpf4	99	81.386	ENSCCAG00000028990	PRPF4	97	81.386	Cebus_capucinus
ENSPKIG00000017259	prpf4	99	81.188	ENSCATG00000021552	PRPF4	97	81.188	Cercocebus_atys
ENSPKIG00000017259	prpf4	99	81.188	ENSCLAG00000013448	PRPF4	97	81.188	Chinchilla_lanigera
ENSPKIG00000017259	prpf4	89	81.195	ENSCHOG00000007233	PRPF4	100	81.195	Choloepus_hoffmanni
ENSPKIG00000017259	prpf4	100	81.065	ENSCPBG00000019136	PRPF4	73	81.065	Chrysemys_picta_bellii
ENSPKIG00000017259	prpf4	99	59.252	ENSCING00000001299	-	97	59.252	Ciona_intestinalis
ENSPKIG00000017259	prpf4	99	59.289	ENSCSAVG00000009178	-	99	60.430	Ciona_savignyi
ENSPKIG00000017259	prpf4	99	81.188	ENSCANG00000003246	PRPF4	97	81.188	Colobus_angolensis_palliatus
ENSPKIG00000017259	prpf4	99	81.386	ENSCGRG00001016992	Prpf4	97	81.386	Cricetulus_griseus_chok1gshd
ENSPKIG00000017259	prpf4	99	81.386	ENSCGRG00000017560	Prpf4	97	81.386	Cricetulus_griseus_crigri
ENSPKIG00000017259	prpf4	100	80.473	ENSCSEG00000020451	prpf4	100	80.473	Cynoglossus_semilaevis
ENSPKIG00000017259	prpf4	100	89.152	ENSDARG00000067639	prpf4	100	89.152	Danio_rerio
ENSPKIG00000017259	prpf4	99	80.792	ENSDNOG00000013203	PRPF4	97	80.792	Dasypus_novemcinctus
ENSPKIG00000017259	prpf4	99	80.792	ENSDORG00000026275	Prpf4	97	80.792	Dipodomys_ordii
ENSPKIG00000017259	prpf4	99	52.000	FBgn0036733	U4-U6-60K	99	52.182	Drosophila_melanogaster
ENSPKIG00000017259	prpf4	99	81.188	ENSETEG00000020389	PRPF4	97	81.188	Echinops_telfairi
ENSPKIG00000017259	prpf4	99	70.429	ENSEBUG00000015229	prpf4	88	70.880	Eptatretus_burgeri
ENSPKIG00000017259	prpf4	99	81.188	ENSEASG00005022678	PRPF4	97	81.188	Equus_asinus_asinus
ENSPKIG00000017259	prpf4	99	81.188	ENSECAG00000007072	PRPF4	97	81.188	Equus_caballus
ENSPKIG00000017259	prpf4	84	84.937	ENSEEUG00000007480	PRPF4	84	84.937	Erinaceus_europaeus
ENSPKIG00000017259	prpf4	100	87.747	ENSELUG00000007510	prpf4	100	87.747	Esox_lucius
ENSPKIG00000017259	prpf4	99	81.188	ENSFCAG00000005514	PRPF4	97	81.188	Felis_catus
ENSPKIG00000017259	prpf4	99	80.543	ENSFALG00000005423	PRPF4	85	80.543	Ficedula_albicollis
ENSPKIG00000017259	prpf4	99	81.188	ENSFDAG00000005839	PRPF4	97	81.188	Fukomys_damarensis
ENSPKIG00000017259	prpf4	100	80.980	ENSFHEG00000001300	prpf4	100	80.980	Fundulus_heteroclitus
ENSPKIG00000017259	prpf4	99	81.818	ENSGALG00000008857	PRPF4	94	81.818	Gallus_gallus
ENSPKIG00000017259	prpf4	94	77.812	ENSGAFG00000012164	prpf4	69	77.812	Gambusia_affinis
ENSPKIG00000017259	prpf4	100	73.477	ENSGACG00000015476	prpf4	100	73.281	Gasterosteus_aculeatus
ENSPKIG00000017259	prpf4	100	81.262	ENSGAGG00000025029	PRPF4	94	81.262	Gopherus_agassizii
ENSPKIG00000017259	prpf4	99	81.386	ENSGGOG00000006943	PRPF4	97	81.386	Gorilla_gorilla
ENSPKIG00000017259	prpf4	100	80.980	ENSHBUG00000000562	prpf4	100	80.980	Haplochromis_burtoni
ENSPKIG00000017259	prpf4	99	64.554	ENSHGLG00000003838	-	97	64.554	Heterocephalus_glaber_female
ENSPKIG00000017259	prpf4	96	69.199	ENSHGLG00000016628	-	95	70.021	Heterocephalus_glaber_female
ENSPKIG00000017259	prpf4	99	80.792	ENSHGLG00000015191	PRPF4	97	80.792	Heterocephalus_glaber_female
ENSPKIG00000017259	prpf4	99	64.554	ENSHGLG00100005571	-	97	64.554	Heterocephalus_glaber_male
ENSPKIG00000017259	prpf4	100	87.377	ENSIPUG00000017956	PRPF4	100	87.377	Ictalurus_punctatus
ENSPKIG00000017259	prpf4	99	81.188	ENSSTOG00000027833	PRPF4	97	81.188	Ictidomys_tridecemlineatus
ENSPKIG00000017259	prpf4	99	80.990	ENSJJAG00000008838	Prpf4	97	80.990	Jaculus_jaculus
ENSPKIG00000017259	prpf4	100	82.157	ENSKMAG00000013236	prpf4	100	82.157	Kryptolebias_marmoratus
ENSPKIG00000017259	prpf4	100	80.709	ENSLBEG00000020611	prpf4	100	80.709	Labrus_bergylta
ENSPKIG00000017259	prpf4	100	78.978	ENSLACG00000016317	PRPF4	97	78.978	Latimeria_chalumnae
ENSPKIG00000017259	prpf4	100	87.771	ENSLOCG00000000581	prpf4	100	87.574	Lepisosteus_oculatus
ENSPKIG00000017259	prpf4	99	81.188	ENSLAFG00000018225	PRPF4	97	81.188	Loxodonta_africana
ENSPKIG00000017259	prpf4	99	80.990	ENSMFAG00000039397	PRPF4	97	80.990	Macaca_fascicularis
ENSPKIG00000017259	prpf4	99	81.188	ENSMMUG00000005844	PRPF4	97	81.188	Macaca_mulatta
ENSPKIG00000017259	prpf4	99	72.475	ENSMNEG00000033737	PRPF4	97	72.475	Macaca_nemestrina
ENSPKIG00000017259	prpf4	99	81.188	ENSMLEG00000040284	PRPF4	97	81.188	Mandrillus_leucophaeus
ENSPKIG00000017259	prpf4	100	80.784	ENSMAMG00000020141	prpf4	100	80.784	Mastacembelus_armatus
ENSPKIG00000017259	prpf4	100	80.980	ENSMZEG00005023205	prpf4	100	80.980	Maylandia_zebra
ENSPKIG00000017259	prpf4	99	81.225	ENSMGAG00000001796	PRPF4	94	81.225	Meleagris_gallopavo
ENSPKIG00000017259	prpf4	99	81.386	ENSMAUG00000018022	Prpf4	97	81.386	Mesocricetus_auratus
ENSPKIG00000017259	prpf4	99	80.990	ENSMICG00000015022	PRPF4	97	80.990	Microcebus_murinus
ENSPKIG00000017259	prpf4	99	80.990	ENSMOCG00000018273	Prpf4	97	80.990	Microtus_ochrogaster
ENSPKIG00000017259	prpf4	100	80.276	ENSMMOG00000021177	prpf4	100	80.276	Mola_mola
ENSPKIG00000017259	prpf4	99	80.792	ENSMODG00000025096	-	94	80.792	Monodelphis_domestica
ENSPKIG00000017259	prpf4	99	80.990	ENSMODG00000004444	-	97	80.990	Monodelphis_domestica
ENSPKIG00000017259	prpf4	100	81.176	ENSMALG00000013624	prpf4	100	81.176	Monopterus_albus
ENSPKIG00000017259	prpf4	99	81.386	MGP_CAROLIEiJ_G0026078	Prpf4	97	81.386	Mus_caroli
ENSPKIG00000017259	prpf4	99	81.386	ENSMUSG00000066148	Prpf4	97	81.386	Mus_musculus
ENSPKIG00000017259	prpf4	99	81.584	MGP_PahariEiJ_G0028413	Prpf4	97	81.584	Mus_pahari
ENSPKIG00000017259	prpf4	99	81.386	MGP_SPRETEiJ_G0027042	Prpf4	97	81.386	Mus_spretus
ENSPKIG00000017259	prpf4	99	81.188	ENSMPUG00000007883	PRPF4	97	81.188	Mustela_putorius_furo
ENSPKIG00000017259	prpf4	99	80.198	ENSMLUG00000008626	-	94	80.198	Myotis_lucifugus
ENSPKIG00000017259	prpf4	99	81.584	ENSMLUG00000015309	-	94	81.584	Myotis_lucifugus
ENSPKIG00000017259	prpf4	99	76.040	ENSNGAG00000000468	Prpf4	97	76.040	Nannospalax_galili
ENSPKIG00000017259	prpf4	100	81.176	ENSNBRG00000007972	prpf4	100	81.176	Neolamprologus_brichardi
ENSPKIG00000017259	prpf4	99	81.188	ENSNLEG00000016647	PRPF4	97	81.188	Nomascus_leucogenys
ENSPKIG00000017259	prpf4	99	80.792	ENSMEUG00000013256	PRPF4	98	80.792	Notamacropus_eugenii
ENSPKIG00000017259	prpf4	99	81.188	ENSOPRG00000005302	PRPF4	97	81.188	Ochotona_princeps
ENSPKIG00000017259	prpf4	99	81.188	ENSODEG00000018147	PRPF4	97	81.188	Octodon_degus
ENSPKIG00000017259	prpf4	100	80.980	ENSONIG00000012671	prpf4	100	80.980	Oreochromis_niloticus
ENSPKIG00000017259	prpf4	99	80.990	ENSOCUG00000005046	PRPF4	97	80.990	Oryctolagus_cuniculus
ENSPKIG00000017259	prpf4	100	79.882	ENSORLG00000019641	prpf4	100	79.882	Oryzias_latipes
ENSPKIG00000017259	prpf4	100	79.882	ENSORLG00020019438	prpf4	100	79.882	Oryzias_latipes_hni
ENSPKIG00000017259	prpf4	100	79.882	ENSOMEG00000020941	prpf4	100	80.625	Oryzias_melastigma
ENSPKIG00000017259	prpf4	99	77.426	ENSOGAG00000007802	PRPF4	95	77.426	Otolemur_garnettii
ENSPKIG00000017259	prpf4	99	80.990	ENSOARG00000006319	PRPF4	94	80.990	Ovis_aries
ENSPKIG00000017259	prpf4	99	81.386	ENSPPAG00000041797	PRPF4	97	81.386	Pan_paniscus
ENSPKIG00000017259	prpf4	99	81.188	ENSPPRG00000014360	PRPF4	97	81.188	Panthera_pardus
ENSPKIG00000017259	prpf4	99	81.188	ENSPTIG00000009574	PRPF4	97	81.188	Panthera_tigris_altaica
ENSPKIG00000017259	prpf4	99	81.386	ENSPTRG00000021274	PRPF4	97	81.386	Pan_troglodytes
ENSPKIG00000017259	prpf4	99	80.990	ENSPANG00000025776	PRPF4	93	80.990	Papio_anubis
ENSPKIG00000017259	prpf4	100	80.868	ENSPSIG00000010713	PRPF4	89	80.868	Pelodiscus_sinensis
ENSPKIG00000017259	prpf4	100	59.266	ENSPMGG00000000997	prpf4	98	60.183	Periophthalmus_magnuspinnatus
ENSPKIG00000017259	prpf4	99	81.386	ENSPEMG00000024115	Prpf4	97	81.386	Peromyscus_maniculatus_bairdii
ENSPKIG00000017259	prpf4	99	80.990	ENSPCIG00000003821	PRPF4	98	80.990	Phascolarctos_cinereus
ENSPKIG00000017259	prpf4	100	74.319	ENSPFOG00000013524	prpf4	99	77.812	Poecilia_formosa
ENSPKIG00000017259	prpf4	93	76.000	ENSPLAG00000011620	prpf4	99	73.860	Poecilia_latipinna
ENSPKIG00000017259	prpf4	98	78.466	ENSPMEG00000006813	prpf4	100	78.466	Poecilia_mexicana
ENSPKIG00000017259	prpf4	99	81.386	ENSPCAG00000002561	PRPF4	98	81.386	Procavia_capensis
ENSPKIG00000017259	prpf4	99	81.584	ENSPCOG00000011975	PRPF4	97	81.584	Propithecus_coquereli
ENSPKIG00000017259	prpf4	99	78.218	ENSPVAG00000004708	PRPF4	97	78.218	Pteropus_vampyrus
ENSPKIG00000017259	prpf4	100	80.980	ENSPNYG00000008013	prpf4	100	80.980	Pundamilia_nyererei
ENSPKIG00000017259	prpf4	100	88.560	ENSPNAG00000000697	prpf4	100	88.560	Pygocentrus_nattereri
ENSPKIG00000017259	prpf4	99	81.188	ENSRNOG00000014777	Prpf4	97	81.188	Rattus_norvegicus
ENSPKIG00000017259	prpf4	99	81.188	ENSRBIG00000040221	PRPF4	97	81.188	Rhinopithecus_bieti
ENSPKIG00000017259	prpf4	99	81.188	ENSRROG00000040240	PRPF4	97	81.188	Rhinopithecus_roxellana
ENSPKIG00000017259	prpf4	99	80.990	ENSSHAG00000017658	PRPF4	97	80.990	Sarcophilus_harrisii
ENSPKIG00000017259	prpf4	100	92.308	ENSSFOG00015008963	prpf4	100	92.308	Scleropages_formosus
ENSPKIG00000017259	prpf4	100	80.980	ENSSMAG00000008889	prpf4	100	80.980	Scophthalmus_maximus
ENSPKIG00000017259	prpf4	99	77.953	ENSSDUG00000022083	prpf4	99	78.150	Seriola_dumerili
ENSPKIG00000017259	prpf4	99	77.953	ENSSLDG00000008115	prpf4	99	78.150	Seriola_lalandi_dorsalis
ENSPKIG00000017259	prpf4	99	81.225	ENSSPUG00000015582	PRPF4	97	81.225	Sphenodon_punctatus
ENSPKIG00000017259	prpf4	100	81.543	ENSSPAG00000011286	prpf4	100	74.854	Stegastes_partitus
ENSPKIG00000017259	prpf4	99	81.188	ENSSSCG00000024648	PRPF4	97	81.188	Sus_scrofa
ENSPKIG00000017259	prpf4	98	82.129	ENSTGUG00000002623	PRPF4	100	82.618	Taeniopygia_guttata
ENSPKIG00000017259	prpf4	100	80.943	ENSTRUG00000008853	prpf4	100	80.943	Takifugu_rubripes
ENSPKIG00000017259	prpf4	100	79.684	ENSTNIG00000013250	prpf4	100	79.684	Tetraodon_nigroviridis
ENSPKIG00000017259	prpf4	99	74.059	ENSTBEG00000000821	PRPF4	97	74.059	Tupaia_belangeri
ENSPKIG00000017259	prpf4	90	82.558	ENSTTRG00000003246	PRPF4	85	82.558	Tursiops_truncatus
ENSPKIG00000017259	prpf4	70	70.141	ENSUAMG00000018288	PRPF4	96	70.141	Ursus_americanus
ENSPKIG00000017259	prpf4	99	80.594	ENSUMAG00000019375	PRPF4	97	80.594	Ursus_maritimus
ENSPKIG00000017259	prpf4	99	81.188	ENSVPAG00000005281	PRPF4	97	81.188	Vicugna_pacos
ENSPKIG00000017259	prpf4	99	80.952	ENSVVUG00000002476	PRPF4	99	80.952	Vulpes_vulpes
ENSPKIG00000017259	prpf4	71	60.167	ENSXCOG00000006101	prpf4	93	63.366	Xiphophorus_couchianus
ENSPKIG00000017259	prpf4	91	68.387	ENSXMAG00000002750	prpf4	100	70.196	Xiphophorus_maculatus