EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000017291 (Gene tree)
Gene ID: 111841024
Gene Symbol: -
Alias: -
Full Name: pre-mRNA-splicing factor 38B-like
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Plus strand
Length: 6880 bases
Position: chrPGUA01000082.1:437258-444137
Accession: 111841024
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000040288	PRP38	PF03371.15	5.7e-56	1	1
ENSPKIP00000040265	PRP38	PF03371.15	5.9e-56	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000021283	-	4661	-	ENSPKIP00000040265	546 (aa)	XP_023662224	UPI000CD65407
ENSPKIT00000021307	-	1608	-	ENSPKIP00000040288	535 (aa)	-	-

Gene Model

Click here to download ENSPKIG00000017291's gene model file

Pathways

Pathway ID	Pathway Name	Source
pki03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000017291's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000017291	-	87	64.579	ENSPKIG00000004815	-	98	66.335

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000017291	-	90	64.286	ENSATEG00000014482	-	98	66.800	Anabas_testudineus
ENSPKIG00000017291	-	54	83.849	ENSAMXG00000039494	-	58	76.124	Astyanax_mexicanus
ENSPKIG00000017291	-	52	78.361	ENSBTAG00000047874	PRPF38B	94	65.091	Bos_taurus
ENSPKIG00000017291	-	50	70.111	ENSCAFG00020010992	-	94	57.942	Canis_lupus_dingo
ENSPKIG00000017291	-	52	78.361	ENSCHIG00000024357	-	94	65.091	Capra_hircus
ENSPKIG00000017291	-	71	92.823	ENSCPBG00000028299	-	99	62.118	Chrysemys_picta_bellii
ENSPKIG00000017291	-	87	63.693	ENSCSEG00000015030	-	100	64.444	Cynoglossus_semilaevis
ENSPKIG00000017291	-	50	82.288	ENSETEG00000014690	-	95	67.120	Echinops_telfairi
ENSPKIG00000017291	-	54	79.585	ENSELUG00000010390	-	90	68.399	Esox_lucius
ENSPKIG00000017291	-	83	65.727	ENSGMOG00000012080	-	98	65.409	Gadus_morhua
ENSPKIG00000017291	-	88	60.561	ENSGALG00000001972	-	93	65.455	Gallus_gallus
ENSPKIG00000017291	-	84	65.458	ENSGAFG00000008943	-	100	69.330	Gambusia_affinis
ENSPKIG00000017291	-	81	92.823	ENSGAGG00000001563	-	99	62.118	Gopherus_agassizii
ENSPKIG00000017291	-	65	69.341	ENSHGLG00000016583	PRPF38B	96	65.185	Heterocephalus_glaber_female
ENSPKIG00000017291	-	90	63.030	ENSKMAG00000005540	-	100	64.892	Kryptolebias_marmoratus
ENSPKIG00000017291	-	93	59.891	ENSLACG00000015511	-	97	64.870	Latimeria_chalumnae
ENSPKIG00000017291	-	51	84.559	ENSMOCG00000020285	-	95	61.717	Microtus_ochrogaster
ENSPKIG00000017291	-	85	63.559	ENSMMOG00000011639	-	99	66.457	Mola_mola
ENSPKIG00000017291	-	59	79.495	ENSMODG00000002350	-	89	83.929	Monodelphis_domestica
ENSPKIG00000017291	-	90	65.918	ENSMALG00000019479	-	100	65.675	Monopterus_albus
ENSPKIG00000017291	-	89	66.191	ENSONIG00000010129	-	99	67.886	Oreochromis_niloticus
ENSPKIG00000017291	-	71	68.812	ENSOANG00000007343	-	98	60.404	Ornithorhynchus_anatinus
ENSPKIG00000017291	-	90	65.021	ENSORLG00000015621	-	95	90.419	Oryzias_latipes
ENSPKIG00000017291	-	90	65.021	ENSORLG00020016276	-	94	90.419	Oryzias_latipes_hni
ENSPKIG00000017291	-	90	64.815	ENSORLG00015016270	-	80	90.419	Oryzias_latipes_hsok
ENSPKIG00000017291	-	90	63.786	ENSOMEG00000022050	-	97	89.941	Oryzias_melastigma
ENSPKIG00000017291	-	52	79.530	ENSOARG00000018899	-	94	64.469	Ovis_aries
ENSPKIG00000017291	-	71	92.381	ENSPSIG00000016569	-	97	65.056	Pelodiscus_sinensis
ENSPKIG00000017291	-	84	65.885	ENSPFOG00000004025	-	87	90.419	Poecilia_formosa
ENSPKIG00000017291	-	84	65.885	ENSPLAG00000019842	-	100	66.802	Poecilia_latipinna
ENSPKIG00000017291	-	85	65.208	ENSPMEG00000004807	-	98	66.802	Poecilia_mexicana
ENSPKIG00000017291	-	84	65.458	ENSPREG00000015599	-	89	90.419	Poecilia_reticulata
ENSPKIG00000017291	-	53	87.500	ENSPNAG00000017484	-	99	70.226	Pygocentrus_nattereri
ENSPKIG00000017291	-	53	78.033	ENSRNOG00000020438	Prpf38b	94	64.481	Rattus_norvegicus
ENSPKIG00000017291	-	99	70.545	ENSSFOG00015011251	-	86	92.771	Scleropages_formosus
ENSPKIG00000017291	-	90	63.136	ENSSLDG00000023487	-	89	89.222	Seriola_lalandi_dorsalis
ENSPKIG00000017291	-	82	65.351	ENSTRUG00000011765	-	99	69.690	Takifugu_rubripes
ENSPKIG00000017291	-	53	75.433	ENSTNIG00000015299	-	99	66.818	Tetraodon_nigroviridis
ENSPKIG00000017291	-	93	61.165	ENSXETG00000005260	prpf38b	96	60.674	Xenopus_tropicalis
ENSPKIG00000017291	-	84	66.314	ENSXCOG00000008329	-	100	66.194	Xiphophorus_couchianus
ENSPKIG00000017291	-	84	66.314	ENSXMAG00000023831	-	100	66.194	Xiphophorus_maculatus