EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPKIG00000017337 (Gene tree)
Gene ID: 111848426
Gene Symbol: RBM20
Alias: -
Full Name: RNA binding motif protein 20
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Plus strand
Length: 48787 bases
Position: chrPGUA01000019.1:3510387-3559173
Accession: 111848426
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000040340	zf-met	PF12874.7	6.7e-05	1	1
ENSPKIP00000040440	zf-met	PF12874.7	7e-05	1	1
ENSPKIP00000040406	zf-met	PF12874.7	7.3e-05	1	1
ENSPKIP00000040364	zf-met	PF12874.7	7.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000021460	RBM20-204	5781	-	ENSPKIP00000040440	1081 (aa)	-	-
ENSPKIT00000021359	RBM20-201	5666	-	ENSPKIP00000040340	1065 (aa)	-	-
ENSPKIT00000021383	RBM20-202	6372	-	ENSPKIP00000040364	1132 (aa)	XP_023676177	UPI000CD61EE3
ENSPKIT00000021426	RBM20-203	6282	-	ENSPKIP00000040406	1102 (aa)	XP_023676180	UPI000CD5D669

Gene Model

Click here to download ENSPKIG00000017337's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000017337's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000017337	RBM20	95	44.444	ENSAPOG00000011327	RBM20	99	46.061	Acanthochromis_polyacanthus
ENSPKIG00000017337	RBM20	80	85.714	ENSACIG00000016368	RBM20	88	85.714	Amphilophus_citrinellus
ENSPKIG00000017337	RBM20	99	48.746	ENSAOCG00000018378	RBM20	99	47.957	Amphiprion_ocellaris
ENSPKIG00000017337	RBM20	88	44.586	ENSATEG00000008782	RBM20	98	44.586	Anabas_testudineus
ENSPKIG00000017337	RBM20	100	47.412	ENSACLG00000025652	RBM20	99	46.727	Astatotilapia_calliptera
ENSPKIG00000017337	RBM20	99	48.792	ENSELUG00000022906	RBM20	99	49.559	Esox_lucius
ENSPKIG00000017337	RBM20	100	46.750	ENSHBUG00000016743	RBM20	99	46.706	Haplochromis_burtoni
ENSPKIG00000017337	RBM20	98	44.365	ENSKMAG00000020318	RBM20	99	44.866	Kryptolebias_marmoratus
ENSPKIG00000017337	RBM20	91	68.056	ENSLACG00000012822	RBM20	97	41.265	Latimeria_chalumnae
ENSPKIG00000017337	RBM20	99	48.067	ENSMAMG00000014492	RBM20	97	48.813	Mastacembelus_armatus
ENSPKIG00000017337	RBM20	100	47.329	ENSMZEG00005003037	RBM20	99	46.645	Maylandia_zebra
ENSPKIG00000017337	RBM20	94	46.778	ENSMMOG00000021599	RBM20	96	47.541	Mola_mola
ENSPKIG00000017337	RBM20	100	47.029	ENSNBRG00000003302	RBM20	99	46.927	Neolamprologus_brichardi
ENSPKIG00000017337	RBM20	96	46.858	ENSONIG00000016294	RBM20	99	50.235	Oreochromis_niloticus
ENSPKIG00000017337	RBM20	100	47.285	ENSPNYG00000002118	RBM20	99	46.683	Pundamilia_nyererei
ENSPKIG00000017337	RBM20	99	48.439	ENSSMAG00000001397	RBM20	99	48.142	Scophthalmus_maximus
ENSPKIG00000017337	RBM20	99	49.436	ENSSDUG00000010084	RBM20	96	50.788	Seriola_dumerili
ENSPKIG00000017337	RBM20	99	50.084	ENSSLDG00000012344	RBM20	99	49.874	Seriola_lalandi_dorsalis
ENSPKIG00000017337	RBM20	99	49.157	ENSSPAG00000005114	RBM20	99	48.776	Stegastes_partitus