EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000017353 (Gene tree)
Gene ID: 111847953
Gene Symbol: -
Alias: -
Full Name: GTP-binding protein SAR1b
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Plus strand
Length: 8152 bases
Position: chrPGUA01000174.1:1193820-1201971
Accession: 111847953
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000040399	MMR_HSR1	PF01926.23	2.6e-05	1	1
ENSPKIP00000040374	MMR_HSR1	PF01926.23	3.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000021419	-	390	-	ENSPKIP00000040399	129 (aa)	-	-
ENSPKIT00000021393	-	3236	-	ENSPKIP00000040374	198 (aa)	XP_023675360	UPI000CD62048
ENSPKIT00000021377	-	3430	-	ENSPKIP00000040358	149 (aa)	-	-

Gene Model

Click here to download ENSPKIG00000017353's gene model file

Pathways

Pathway ID	Pathway Name	Source
pki04141	Protein processing in endoplasmic reticulum	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000017353's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000017353	-	85	32.143	ENSPKIG00000021369	arl6	60	32.143
ENSPKIG00000017353	-	75	32.990	ENSPKIG00000025349	arf4a	54	32.990
ENSPKIG00000017353	-	100	95.455	ENSPKIG00000010688	sar1b	100	95.455
ENSPKIG00000017353	-	100	86.364	ENSPKIG00000007615	sar1ab	100	86.364
ENSPKIG00000017353	-	92	30.952	ENSPKIG00000024946	arl2	93	30.055
ENSPKIG00000017353	-	66	30.534	ENSPKIG00000021727	arl5c	73	30.534
ENSPKIG00000017353	-	79	37.383	ENSPKIG00000011618	arl4aa	65	36.567
ENSPKIG00000017353	-	87	31.395	ENSPKIG00000013814	-	89	31.395
ENSPKIG00000017353	-	82	36.937	ENSPKIG00000020450	arl4cb	76	33.333
ENSPKIG00000017353	-	72	30.108	ENSPKIG00000012886	arl3	54	30.108
ENSPKIG00000017353	-	68	37.634	ENSPKIG00000010744	arl4ab	53	36.667
ENSPKIG00000017353	-	84	31.250	ENSPKIG00000017974	-	82	31.613
ENSPKIG00000017353	-	95	30.570	ENSPKIG00000008422	ARL4C	92	30.570
ENSPKIG00000017353	-	94	30.108	ENSPKIG00000019284	arl3l1	95	30.108
ENSPKIG00000017353	-	87	31.395	ENSPKIG00000025381	-	89	31.395
ENSPKIG00000017353	-	76	35.354	ENSPKIG00000005488	ARF1	85	31.655
ENSPKIG00000017353	-	86	30.682	ENSPKIG00000001594	arl4d	82	30.682
ENSPKIG00000017353	-	76	35.354	ENSPKIG00000018781	-	55	35.354
ENSPKIG00000017353	-	76	30.464	ENSPKIG00000019809	arl8bb	52	30.464
ENSPKIG00000017353	-	76	35.354	ENSPKIG00000004758	-	55	35.354
ENSPKIG00000017353	-	81	34.906	ENSPKIG00000007118	arl1	58	34.906
ENSPKIG00000017353	-	81	33.654	ENSPKIG00000025204	-	57	33.654
ENSPKIG00000017353	-	81	33.654	ENSPKIG00000007437	-	57	33.654

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000017353	-	100	92.929	ENSAPOG00000007186	sar1b	100	92.929	Acanthochromis_polyacanthus
ENSPKIG00000017353	-	100	86.869	ENSAPOG00000017891	-	100	86.869	Acanthochromis_polyacanthus
ENSPKIG00000017353	-	100	85.354	ENSACIG00000024513	-	100	85.354	Amphilophus_citrinellus
ENSPKIG00000017353	-	100	93.434	ENSACIG00000013634	sar1b	100	93.434	Amphilophus_citrinellus
ENSPKIG00000017353	-	100	92.424	ENSAOCG00000005888	sar1b	100	92.424	Amphiprion_ocellaris
ENSPKIG00000017353	-	100	86.869	ENSAOCG00000002627	-	100	86.869	Amphiprion_ocellaris
ENSPKIG00000017353	-	100	92.424	ENSAPEG00000022771	sar1b	100	92.424	Amphiprion_percula
ENSPKIG00000017353	-	100	86.869	ENSAPEG00000019680	-	100	86.869	Amphiprion_percula
ENSPKIG00000017353	-	100	84.343	ENSATEG00000023368	-	100	84.343	Anabas_testudineus
ENSPKIG00000017353	-	100	92.929	ENSATEG00000012904	sar1b	100	92.929	Anabas_testudineus
ENSPKIG00000017353	-	100	90.909	ENSACAG00000001470	-	100	90.909	Anolis_carolinensis
ENSPKIG00000017353	-	100	92.424	ENSACLG00000014649	sar1b	100	92.424	Astatotilapia_calliptera
ENSPKIG00000017353	-	100	86.364	ENSACLG00000005011	-	100	86.364	Astatotilapia_calliptera
ENSPKIG00000017353	-	100	87.374	ENSAMXG00000034192	-	91	87.374	Astyanax_mexicanus
ENSPKIG00000017353	-	89	95.652	ENSAMXG00000018108	sar1b	84	95.726	Astyanax_mexicanus
ENSPKIG00000017353	-	100	85.354	ENSCSEG00000015238	sar1b	97	85.354	Cynoglossus_semilaevis
ENSPKIG00000017353	-	100	86.364	ENSCSEG00000016976	-	100	86.364	Cynoglossus_semilaevis
ENSPKIG00000017353	-	100	94.444	ENSCVAG00000022959	sar1b	100	94.444	Cyprinodon_variegatus
ENSPKIG00000017353	-	100	94.949	ENSDARG00000103403	sar1b	100	94.949	Danio_rerio
ENSPKIG00000017353	-	99	70.918	FBgn0038947	Sar1	99	70.918	Drosophila_melanogaster
ENSPKIG00000017353	-	97	88.542	ENSEBUG00000011723	sar1b	97	88.542	Eptatretus_burgeri
ENSPKIG00000017353	-	100	95.960	ENSELUG00000020912	sar1b	100	95.960	Esox_lucius
ENSPKIG00000017353	-	100	93.939	ENSFHEG00000019865	sar1b	100	93.939	Fundulus_heteroclitus
ENSPKIG00000017353	-	100	94.949	ENSGMOG00000008023	sar1b	100	94.949	Gadus_morhua
ENSPKIG00000017353	-	100	92.929	ENSGAFG00000007081	sar1b	100	92.929	Gambusia_affinis
ENSPKIG00000017353	-	100	92.424	ENSGACG00000001474	sar1b	100	92.424	Gasterosteus_aculeatus
ENSPKIG00000017353	-	100	92.424	ENSHBUG00000000915	sar1b	100	92.424	Haplochromis_burtoni
ENSPKIG00000017353	-	100	86.364	ENSHBUG00000018397	-	100	86.364	Haplochromis_burtoni
ENSPKIG00000017353	-	100	93.434	ENSHCOG00000010953	sar1b	100	93.434	Hippocampus_comes
ENSPKIG00000017353	-	100	93.434	ENSIPUG00000020925	sar1b	100	93.434	Ictalurus_punctatus
ENSPKIG00000017353	-	100	87.374	ENSIPUG00000010046	sar1b	100	87.374	Ictalurus_punctatus
ENSPKIG00000017353	-	100	92.424	ENSKMAG00000019693	sar1b	100	92.424	Kryptolebias_marmoratus
ENSPKIG00000017353	-	100	86.869	ENSKMAG00000014875	-	100	86.869	Kryptolebias_marmoratus
ENSPKIG00000017353	-	100	90.404	ENSLBEG00000027550	sar1b	100	90.404	Labrus_bergylta
ENSPKIG00000017353	-	100	87.374	ENSLBEG00000016945	-	100	87.374	Labrus_bergylta
ENSPKIG00000017353	-	100	87.374	ENSLACG00000010795	sar1b	100	87.374	Latimeria_chalumnae
ENSPKIG00000017353	-	100	73.367	ENSLACG00000017029	-	100	73.367	Latimeria_chalumnae
ENSPKIG00000017353	-	100	91.919	ENSLOCG00000005214	-	100	91.919	Lepisosteus_oculatus
ENSPKIG00000017353	-	100	94.444	ENSLOCG00000010197	sar1b	100	94.444	Lepisosteus_oculatus
ENSPKIG00000017353	-	100	91.919	ENSMAMG00000021732	sar1b	100	91.919	Mastacembelus_armatus
ENSPKIG00000017353	-	100	86.364	ENSMZEG00005001012	-	100	86.364	Maylandia_zebra
ENSPKIG00000017353	-	100	92.424	ENSMZEG00005008942	sar1b	100	92.424	Maylandia_zebra
ENSPKIG00000017353	-	90	91.620	ENSMGAG00000005387	-	91	91.620	Meleagris_gallopavo
ENSPKIG00000017353	-	100	85.354	ENSMMOG00000013803	-	100	85.354	Mola_mola
ENSPKIG00000017353	-	100	94.444	ENSMALG00000016635	sar1b	97	92.857	Monopterus_albus
ENSPKIG00000017353	-	100	92.929	ENSNBRG00000008013	sar1b	100	92.929	Neolamprologus_brichardi
ENSPKIG00000017353	-	100	86.364	ENSNBRG00000014004	-	100	86.364	Neolamprologus_brichardi
ENSPKIG00000017353	-	100	92.929	ENSONIG00000017278	sar1b	100	92.929	Oreochromis_niloticus
ENSPKIG00000017353	-	100	92.929	ENSORLG00000000932	sar1b	100	92.929	Oryzias_latipes
ENSPKIG00000017353	-	100	92.929	ENSORLG00020021985	sar1b	100	92.929	Oryzias_latipes_hni
ENSPKIG00000017353	-	100	92.929	ENSORLG00015007044	sar1b	100	92.929	Oryzias_latipes_hsok
ENSPKIG00000017353	-	100	92.929	ENSOMEG00000001052	sar1b	100	92.929	Oryzias_melastigma
ENSPKIG00000017353	-	89	93.913	ENSPMGG00000001234	sar1b	91	94.828	Periophthalmus_magnuspinnatus
ENSPKIG00000017353	-	100	85.572	ENSPMAG00000003593	sar1b	100	85.572	Petromyzon_marinus
ENSPKIG00000017353	-	100	92.424	ENSPFOG00000005666	sar1b	100	92.424	Poecilia_formosa
ENSPKIG00000017353	-	89	90.435	ENSPLAG00000001016	-	75	90.598	Poecilia_latipinna
ENSPKIG00000017353	-	100	91.919	ENSPLAG00000012223	sar1b	100	91.919	Poecilia_latipinna
ENSPKIG00000017353	-	100	92.424	ENSPMEG00000016831	sar1b	100	92.424	Poecilia_mexicana
ENSPKIG00000017353	-	100	92.424	ENSPREG00000005312	sar1b	90	92.424	Poecilia_reticulata
ENSPKIG00000017353	-	98	84.127	ENSPREG00000002020	-	93	84.127	Poecilia_reticulata
ENSPKIG00000017353	-	100	86.364	ENSPNYG00000021357	-	100	86.364	Pundamilia_nyererei
ENSPKIG00000017353	-	100	92.424	ENSPNYG00000012440	sar1b	100	92.424	Pundamilia_nyererei
ENSPKIG00000017353	-	100	94.444	ENSPNAG00000014683	sar1b	100	94.444	Pygocentrus_nattereri
ENSPKIG00000017353	-	100	88.384	ENSPNAG00000001123	-	100	88.384	Pygocentrus_nattereri
ENSPKIG00000017353	-	100	94.949	ENSSFOG00015020051	sar1b	100	94.949	Scleropages_formosus
ENSPKIG00000017353	-	100	92.929	ENSSFOG00015018128	-	100	92.929	Scleropages_formosus
ENSPKIG00000017353	-	100	90.404	ENSSMAG00000007106	sar1b	80	90.404	Scophthalmus_maximus
ENSPKIG00000017353	-	100	86.869	ENSSMAG00000002165	-	100	86.869	Scophthalmus_maximus
ENSPKIG00000017353	-	100	86.364	ENSSDUG00000019629	-	100	86.364	Seriola_dumerili
ENSPKIG00000017353	-	100	93.939	ENSSDUG00000020926	sar1b	100	93.939	Seriola_dumerili
ENSPKIG00000017353	-	100	86.364	ENSSLDG00000024197	-	100	86.364	Seriola_lalandi_dorsalis
ENSPKIG00000017353	-	100	93.939	ENSSLDG00000017052	sar1b	100	93.939	Seriola_lalandi_dorsalis
ENSPKIG00000017353	-	100	90.909	ENSSPUG00000010247	-	100	90.909	Sphenodon_punctatus
ENSPKIG00000017353	-	100	86.364	ENSSPAG00000015626	-	100	86.364	Stegastes_partitus
ENSPKIG00000017353	-	100	93.434	ENSSPAG00000017634	sar1b	100	93.434	Stegastes_partitus
ENSPKIG00000017353	-	100	88.889	ENSTRUG00000023908	sar1b	100	88.889	Takifugu_rubripes
ENSPKIG00000017353	-	100	89.394	ENSTNIG00000016097	sar1b	100	89.394	Tetraodon_nigroviridis
ENSPKIG00000017353	-	91	89.744	ENSXCOG00000006154	-	79	89.744	Xiphophorus_couchianus
ENSPKIG00000017353	-	90	93.258	ENSXCOG00000004160	sar1b	87	93.258	Xiphophorus_couchianus
ENSPKIG00000017353	-	100	92.929	ENSXMAG00000008294	sar1b	100	92.929	Xiphophorus_maculatus