EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPKIG00000017408 (Gene tree)
Gene ID: 111857235
Gene Symbol: cpne1
Alias: -
Full Name: copine-3-like
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Plus strand
Length: 23620 bases
Position: chrPGUA01000323.1:214522-238141
Accession: 111857235
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000040505	RRM_1	PF00076.22	4e-28	1	3
ENSPKIP00000040505	RRM_1	PF00076.22	4e-28	2	3
ENSPKIP00000040505	RRM_1	PF00076.22	4e-28	3	3
ENSPKIP00000040543	RRM_1	PF00076.22	4e-28	1	3
ENSPKIP00000040543	RRM_1	PF00076.22	4e-28	2	3
ENSPKIP00000040543	RRM_1	PF00076.22	4e-28	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000021564	-	7458	-	ENSPKIP00000040543	1173 (aa)	-	-
ENSPKIT00000021605	-	5739	-	ENSPKIP00000040584	533 (aa)	XP_023693644	UPI000CD60631
ENSPKIT00000021642	-	5596	-	ENSPKIP00000040620	532 (aa)	-	-
ENSPKIT00000021525	-	7541	-	ENSPKIP00000040505	1173 (aa)	-	-

Gene Model

Click here to download ENSPKIG00000017408's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000017408's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000017408	cpne1	99	70.436	ENSLACG00000018820	cpne1	53	70.157	Latimeria_chalumnae
ENSPKIG00000017408	cpne1	77	62.540	ENSOGAG00000011112	-	67	62.540	Otolemur_garnettii
ENSPKIG00000017408	cpne1	99	63.047	ENSOARG00000014537	CPNE1	66	62.420	Ovis_aries