EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPKIG00000017563 (Gene tree)
Gene ID: 111855987
Gene Symbol: kpnb1
Alias: -
Full Name: karyopherin subunit beta 1
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Plus strand
Length: 25912 bases
Position: chrPGUA01000031.1:654694-680605
Accession: 111855987
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000040792	IBN_N	PF03810.19	7.7e-12	1	1
ENSPKIP00000040708	IBN_N	PF03810.19	1.6e-11	1	1
ENSPKIP00000040742	IBN_N	PF03810.19	1.6e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000021815	-	2628	-	ENSPKIP00000040792	875 (aa)	-	-
ENSPKIT00000021729	-	3042	-	ENSPKIP00000040708	876 (aa)	XP_023691322	UPI000CD61BDC
ENSPKIT00000021763	-	3045	-	ENSPKIP00000040742	877 (aa)	-	-

Gene Model

Click here to download ENSPKIG00000017563's gene model file

Pathways

Pathway ID	Pathway Name	Source
pki03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000017563's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000017563	kpnb1	100	93.037	ENSG00000108424	KPNB1	100	95.000	Homo_sapiens
ENSPKIG00000017563	kpnb1	100	97.260	ENSAPOG00000020572	kpnb1	100	97.260	Acanthochromis_polyacanthus
ENSPKIG00000017563	kpnb1	96	93.128	ENSAMEG00000004613	KPNB1	100	93.128	Ailuropoda_melanoleuca
ENSPKIG00000017563	kpnb1	98	97.316	ENSACIG00000023130	kpnb1	100	97.316	Amphilophus_citrinellus
ENSPKIG00000017563	kpnb1	100	97.260	ENSAOCG00000007048	kpnb1	100	97.260	Amphiprion_ocellaris
ENSPKIG00000017563	kpnb1	100	97.260	ENSAPEG00000008270	kpnb1	100	97.260	Amphiprion_percula
ENSPKIG00000017563	kpnb1	100	97.032	ENSATEG00000015139	kpnb1	100	97.032	Anabas_testudineus
ENSPKIG00000017563	kpnb1	96	92.899	ENSAPLG00000010177	KPNB1	96	92.899	Anas_platyrhynchos
ENSPKIG00000017563	kpnb1	100	93.379	ENSACAG00000007097	KPNB1	100	93.379	Anolis_carolinensis
ENSPKIG00000017563	kpnb1	100	90.308	ENSANAG00000024932	-	100	90.308	Aotus_nancymaae
ENSPKIG00000017563	kpnb1	100	97.146	ENSACLG00000015070	kpnb1	100	97.146	Astatotilapia_calliptera
ENSPKIG00000017563	kpnb1	100	96.461	ENSAMXG00000041903	kpnb1	100	96.461	Astyanax_mexicanus
ENSPKIG00000017563	kpnb1	100	93.265	ENSBTAG00000006586	KPNB1	100	93.265	Bos_taurus
ENSPKIG00000017563	kpnb1	99	48.190	WBGene00002075	imb-1	98	47.964	Caenorhabditis_elegans
ENSPKIG00000017563	kpnb1	100	93.151	ENSCJAG00000007834	KPNB1	100	93.151	Callithrix_jacchus
ENSPKIG00000017563	kpnb1	100	93.265	ENSCAFG00000016678	KPNB1	100	93.265	Canis_familiaris
ENSPKIG00000017563	kpnb1	100	93.273	ENSCAFG00020023205	KPNB1	100	93.273	Canis_lupus_dingo
ENSPKIG00000017563	kpnb1	100	93.273	ENSCHIG00000014896	KPNB1	100	93.273	Capra_hircus
ENSPKIG00000017563	kpnb1	100	91.334	ENSTSYG00000014472	KPNB1	100	91.334	Carlito_syrichta
ENSPKIG00000017563	kpnb1	96	93.594	ENSCAPG00000014185	KPNB1	100	93.594	Cavia_aperea
ENSPKIG00000017563	kpnb1	100	93.493	ENSCPOG00000006566	KPNB1	100	93.493	Cavia_porcellus
ENSPKIG00000017563	kpnb1	97	79.225	ENSCCAG00000018551	-	100	79.225	Cebus_capucinus
ENSPKIG00000017563	kpnb1	100	86.689	ENSCCAG00000029263	-	100	86.689	Cebus_capucinus
ENSPKIG00000017563	kpnb1	100	93.037	ENSCATG00000037124	KPNB1	100	93.037	Cercocebus_atys
ENSPKIG00000017563	kpnb1	100	93.379	ENSCLAG00000017091	KPNB1	100	93.379	Chinchilla_lanigera
ENSPKIG00000017563	kpnb1	100	93.037	ENSCSAG00000002605	KPNB1	100	93.037	Chlorocebus_sabaeus
ENSPKIG00000017563	kpnb1	73	88.679	ENSCHOG00000010604	KPNB1	73	88.679	Choloepus_hoffmanni
ENSPKIG00000017563	kpnb1	99	93.743	ENSCPBG00000027423	KPNB1	94	93.743	Chrysemys_picta_bellii
ENSPKIG00000017563	kpnb1	99	65.678	ENSCING00000004639	-	99	65.678	Ciona_intestinalis
ENSPKIG00000017563	kpnb1	100	63.051	ENSCSAVG00000008624	-	100	63.051	Ciona_savignyi
ENSPKIG00000017563	kpnb1	96	93.722	ENSCANG00000013489	KPNB1	100	93.722	Colobus_angolensis_palliatus
ENSPKIG00000017563	kpnb1	100	93.151	ENSCGRG00001016042	Kpnb1	100	93.151	Cricetulus_griseus_chok1gshd
ENSPKIG00000017563	kpnb1	96	93.246	ENSCGRG00000013910	Kpnb1	100	93.238	Cricetulus_griseus_crigri
ENSPKIG00000017563	kpnb1	97	93.310	ENSCSEG00000007991	kpnb1	100	93.310	Cynoglossus_semilaevis
ENSPKIG00000017563	kpnb1	100	96.233	ENSDARG00000104889	kpnb1	100	96.233	Danio_rerio
ENSPKIG00000017563	kpnb1	99	62.557	FBgn0262743	Fs(2)Ket	99	62.215	Drosophila_melanogaster
ENSPKIG00000017563	kpnb1	99	81.481	ENSEBUG00000013869	kpnb1	98	81.555	Eptatretus_burgeri
ENSPKIG00000017563	kpnb1	100	93.265	ENSEASG00005000805	KPNB1	100	93.265	Equus_asinus_asinus
ENSPKIG00000017563	kpnb1	100	93.273	ENSECAG00000014560	KPNB1	100	93.273	Equus_caballus
ENSPKIG00000017563	kpnb1	85	92.462	ENSEEUG00000005046	KPNB1	88	92.462	Erinaceus_europaeus
ENSPKIG00000017563	kpnb1	100	96.575	ENSELUG00000015847	kpnb1	100	96.575	Esox_lucius
ENSPKIG00000017563	kpnb1	100	93.265	ENSFCAG00000023994	KPNB1	100	93.265	Felis_catus
ENSPKIG00000017563	kpnb1	96	93.476	ENSFDAG00000019923	KPNB1	100	93.476	Fukomys_damarensis
ENSPKIG00000017563	kpnb1	100	96.233	ENSFHEG00000020199	kpnb1	100	96.233	Fundulus_heteroclitus
ENSPKIG00000017563	kpnb1	100	91.553	ENSGMOG00000011607	kpnb1	99	91.553	Gadus_morhua
ENSPKIG00000017563	kpnb1	100	93.151	ENSGALG00000036962	KPNB1	100	93.151	Gallus_gallus
ENSPKIG00000017563	kpnb1	100	96.005	ENSGAFG00000000783	kpnb1	100	96.005	Gambusia_affinis
ENSPKIG00000017563	kpnb1	100	92.316	ENSGACG00000014765	kpnb1	100	92.316	Gasterosteus_aculeatus
ENSPKIG00000017563	kpnb1	96	93.222	ENSGAGG00000023737	KPNB1	92	93.222	Gopherus_agassizii
ENSPKIG00000017563	kpnb1	100	93.037	ENSGGOG00000008089	KPNB1	100	93.037	Gorilla_gorilla
ENSPKIG00000017563	kpnb1	100	97.146	ENSHBUG00000016826	kpnb1	100	97.146	Haplochromis_burtoni
ENSPKIG00000017563	kpnb1	100	93.615	ENSHGLG00000014138	KPNB1	100	93.615	Heterocephalus_glaber_female
ENSPKIG00000017563	kpnb1	96	93.720	ENSHGLG00100006572	KPNB1	100	93.713	Heterocephalus_glaber_male
ENSPKIG00000017563	kpnb1	100	93.607	ENSHCOG00000002084	kpnb1	100	93.607	Hippocampus_comes
ENSPKIG00000017563	kpnb1	99	91.667	ENSIPUG00000012402	kpnb1	95	91.667	Ictalurus_punctatus
ENSPKIG00000017563	kpnb1	100	93.273	ENSSTOG00000007896	KPNB1	100	93.273	Ictidomys_tridecemlineatus
ENSPKIG00000017563	kpnb1	100	93.151	ENSJJAG00000010909	Kpnb1	100	93.151	Jaculus_jaculus
ENSPKIG00000017563	kpnb1	100	96.005	ENSKMAG00000001547	kpnb1	100	96.005	Kryptolebias_marmoratus
ENSPKIG00000017563	kpnb1	99	96.540	ENSLBEG00000025794	kpnb1	99	94.737	Labrus_bergylta
ENSPKIG00000017563	kpnb1	88	92.348	ENSLACG00000017620	KPNB1	99	92.348	Latimeria_chalumnae
ENSPKIG00000017563	kpnb1	100	97.491	ENSLOCG00000013753	kpnb1	100	97.489	Lepisosteus_oculatus
ENSPKIG00000017563	kpnb1	100	88.128	ENSLAFG00000001328	KPNB1	100	88.128	Loxodonta_africana
ENSPKIG00000017563	kpnb1	99	90.618	ENSMFAG00000030197	KPNB1	100	93.120	Macaca_fascicularis
ENSPKIG00000017563	kpnb1	99	91.553	ENSMMUG00000019760	KPNB1	99	91.553	Macaca_mulatta
ENSPKIG00000017563	kpnb1	100	93.037	ENSMNEG00000040927	KPNB1	100	93.037	Macaca_nemestrina
ENSPKIG00000017563	kpnb1	100	90.650	ENSMLEG00000038185	KPNB1	100	90.650	Mandrillus_leucophaeus
ENSPKIG00000017563	kpnb1	100	97.374	ENSMAMG00000011036	kpnb1	100	97.374	Mastacembelus_armatus
ENSPKIG00000017563	kpnb1	100	97.146	ENSMZEG00005004564	kpnb1	100	97.146	Maylandia_zebra
ENSPKIG00000017563	kpnb1	55	92.340	ENSMGAG00000002770	-	100	92.340	Meleagris_gallopavo
ENSPKIG00000017563	kpnb1	100	93.151	ENSMAUG00000006211	Kpnb1	100	93.151	Mesocricetus_auratus
ENSPKIG00000017563	kpnb1	100	93.265	ENSMICG00000012059	KPNB1	84	93.265	Microcebus_murinus
ENSPKIG00000017563	kpnb1	100	93.151	ENSMOCG00000003683	Kpnb1	100	93.151	Microtus_ochrogaster
ENSPKIG00000017563	kpnb1	100	93.721	ENSMODG00000012505	KPNB1	100	93.721	Monodelphis_domestica
ENSPKIG00000017563	kpnb1	100	97.374	ENSMALG00000000863	kpnb1	100	97.374	Monopterus_albus
ENSPKIG00000017563	kpnb1	94	93.431	MGP_CAROLIEiJ_G0017050	Kpnb1	100	93.431	Mus_caroli
ENSPKIG00000017563	kpnb1	100	93.151	ENSMUSG00000001440	Kpnb1	100	93.151	Mus_musculus
ENSPKIG00000017563	kpnb1	100	92.246	ENSMPUG00000015220	KPNB1	100	92.246	Mustela_putorius_furo
ENSPKIG00000017563	kpnb1	100	88.383	ENSMLUG00000014522	KPNB1	100	88.383	Myotis_lucifugus
ENSPKIG00000017563	kpnb1	96	93.246	ENSNGAG00000017610	Kpnb1	100	93.238	Nannospalax_galili
ENSPKIG00000017563	kpnb1	100	97.146	ENSNBRG00000019305	kpnb1	100	97.146	Neolamprologus_brichardi
ENSPKIG00000017563	kpnb1	100	93.037	ENSNLEG00000001446	KPNB1	100	93.037	Nomascus_leucogenys
ENSPKIG00000017563	kpnb1	100	88.128	ENSMEUG00000014284	KPNB1	100	88.128	Notamacropus_eugenii
ENSPKIG00000017563	kpnb1	100	93.379	ENSODEG00000017287	KPNB1	100	93.379	Octodon_degus
ENSPKIG00000017563	kpnb1	100	97.146	ENSONIG00000009269	kpnb1	100	97.146	Oreochromis_niloticus
ENSPKIG00000017563	kpnb1	100	93.265	ENSOCUG00000015425	KPNB1	100	93.265	Oryctolagus_cuniculus
ENSPKIG00000017563	kpnb1	100	96.575	ENSORLG00000019936	kpnb1	100	96.575	Oryzias_latipes
ENSPKIG00000017563	kpnb1	100	96.575	ENSORLG00020021181	kpnb1	100	96.575	Oryzias_latipes_hni
ENSPKIG00000017563	kpnb1	100	96.461	ENSORLG00015012177	kpnb1	100	96.461	Oryzias_latipes_hsok
ENSPKIG00000017563	kpnb1	100	96.689	ENSOMEG00000021022	kpnb1	100	96.689	Oryzias_melastigma
ENSPKIG00000017563	kpnb1	100	93.151	ENSOGAG00000006153	KPNB1	100	93.151	Otolemur_garnettii
ENSPKIG00000017563	kpnb1	97	92.506	ENSOARG00000008469	KPNB1	99	92.506	Ovis_aries
ENSPKIG00000017563	kpnb1	100	93.037	ENSPPAG00000028842	KPNB1	100	93.037	Pan_paniscus
ENSPKIG00000017563	kpnb1	97	93.042	ENSPPRG00000022879	KPNB1	97	93.042	Panthera_pardus
ENSPKIG00000017563	kpnb1	97	93.042	ENSPTIG00000006870	KPNB1	97	93.042	Panthera_tigris_altaica
ENSPKIG00000017563	kpnb1	100	93.037	ENSPTRG00000009333	KPNB1	100	93.037	Pan_troglodytes
ENSPKIG00000017563	kpnb1	100	93.044	ENSPANG00000022099	KPNB1	100	93.044	Papio_anubis
ENSPKIG00000017563	kpnb1	96	93.832	ENSPSIG00000009775	KPNB1	100	93.832	Pelodiscus_sinensis
ENSPKIG00000017563	kpnb1	100	89.863	ENSPMGG00000001041	kpnb1	93	89.863	Periophthalmus_magnuspinnatus
ENSPKIG00000017563	kpnb1	100	93.151	ENSPEMG00000017783	Kpnb1	100	93.151	Peromyscus_maniculatus_bairdii
ENSPKIG00000017563	kpnb1	99	85.535	ENSPMAG00000007117	kpnb1	99	85.535	Petromyzon_marinus
ENSPKIG00000017563	kpnb1	100	93.721	ENSPCIG00000001034	KPNB1	100	93.721	Phascolarctos_cinereus
ENSPKIG00000017563	kpnb1	100	96.005	ENSPFOG00000009014	kpnb1	100	96.005	Poecilia_formosa
ENSPKIG00000017563	kpnb1	100	96.005	ENSPLAG00000010922	kpnb1	100	96.005	Poecilia_latipinna
ENSPKIG00000017563	kpnb1	100	96.005	ENSPREG00000012268	kpnb1	100	96.005	Poecilia_reticulata
ENSPKIG00000017563	kpnb1	100	92.580	ENSPPYG00000025935	KPNB1	100	92.580	Pongo_abelii
ENSPKIG00000017563	kpnb1	75	78.333	ENSPCAG00000002526	KPNB1	78	78.333	Procavia_capensis
ENSPKIG00000017563	kpnb1	100	93.265	ENSPCOG00000026259	KPNB1	100	93.265	Propithecus_coquereli
ENSPKIG00000017563	kpnb1	100	92.808	ENSPVAG00000004910	KPNB1	100	92.808	Pteropus_vampyrus
ENSPKIG00000017563	kpnb1	100	92.795	ENSPNYG00000017703	kpnb1	96	97.066	Pundamilia_nyererei
ENSPKIG00000017563	kpnb1	99	88.404	ENSPNAG00000024047	kpnb1	98	88.404	Pygocentrus_nattereri
ENSPKIG00000017563	kpnb1	100	93.151	ENSRNOG00000009275	Kpnb1	100	93.151	Rattus_norvegicus
ENSPKIG00000017563	kpnb1	100	92.930	ENSRBIG00000002254	KPNB1	100	92.930	Rhinopithecus_bieti
ENSPKIG00000017563	kpnb1	99	92.503	ENSRROG00000030419	KPNB1	99	92.503	Rhinopithecus_roxellana
ENSPKIG00000017563	kpnb1	99	34.016	YLR347C	KAP95	99	33.675	Saccharomyces_cerevisiae
ENSPKIG00000017563	kpnb1	100	93.037	ENSSBOG00000030025	KPNB1	94	93.037	Saimiri_boliviensis_boliviensis
ENSPKIG00000017563	kpnb1	96	93.506	ENSSHAG00000018214	KPNB1	100	93.506	Sarcophilus_harrisii
ENSPKIG00000017563	kpnb1	100	98.288	ENSSFOG00015020000	kpnb1	100	98.288	Scleropages_formosus
ENSPKIG00000017563	kpnb1	100	97.603	ENSSDUG00000016218	kpnb1	100	97.603	Seriola_dumerili
ENSPKIG00000017563	kpnb1	98	97.555	ENSSLDG00000021549	kpnb1	97	97.555	Seriola_lalandi_dorsalis
ENSPKIG00000017563	kpnb1	100	93.265	ENSSPUG00000017799	KPNB1	100	93.265	Sphenodon_punctatus
ENSPKIG00000017563	kpnb1	100	97.146	ENSSPAG00000019346	kpnb1	100	97.146	Stegastes_partitus
ENSPKIG00000017563	kpnb1	100	93.265	ENSSSCG00000017514	KPNB1	100	93.265	Sus_scrofa
ENSPKIG00000017563	kpnb1	96	88.256	ENSTGUG00000003387	KPNB1	100	88.256	Taeniopygia_guttata
ENSPKIG00000017563	kpnb1	100	94.406	ENSTRUG00000000542	kpnb1	100	94.406	Takifugu_rubripes
ENSPKIG00000017563	kpnb1	100	95.091	ENSTNIG00000006494	kpnb1	100	95.091	Tetraodon_nigroviridis
ENSPKIG00000017563	kpnb1	96	93.238	ENSTTRG00000004682	KPNB1	100	93.238	Tursiops_truncatus
ENSPKIG00000017563	kpnb1	100	93.273	ENSUAMG00000025344	KPNB1	100	93.273	Ursus_americanus
ENSPKIG00000017563	kpnb1	98	92.102	ENSUMAG00000016471	KPNB1	98	92.102	Ursus_maritimus
ENSPKIG00000017563	kpnb1	100	79.566	ENSVPAG00000003675	KPNB1	100	79.566	Vicugna_pacos
ENSPKIG00000017563	kpnb1	100	93.265	ENSVVUG00000003085	KPNB1	100	93.265	Vulpes_vulpes
ENSPKIG00000017563	kpnb1	100	92.808	ENSXETG00000014717	kpnb1	100	92.808	Xenopus_tropicalis
ENSPKIG00000017563	kpnb1	100	95.890	ENSXMAG00000018792	kpnb1	100	95.890	Xiphophorus_maculatus