EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPKIG00000017597 (Gene tree)
Gene ID: 111833184
Gene Symbol: tdrkh
Alias: -
Full Name: tudor and KH domain containing
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Minus strand
Length: 11521 bases
Position: chrPGUA01000438.1:251638-263158
Accession: 111833184
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000040871	KH_1	PF00013.29	5.7e-16	1	1
ENSPKIP00000040915	KH_1	PF00013.29	8.1e-16	1	1
ENSPKIP00000040925	KH_1	PF00013.29	8.2e-16	1	1
ENSPKIP00000040840	KH_1	PF00013.29	9.8e-16	1	1
ENSPKIP00000040800	KH_1	PF00013.29	1.4e-15	1	1
ENSPKIP00000040871	TUDOR	PF00567.24	2.3e-27	1	1
ENSPKIP00000040840	TUDOR	PF00567.24	2.5e-27	1	1
ENSPKIP00000040925	TUDOR	PF00567.24	2.6e-27	1	1
ENSPKIP00000040800	TUDOR	PF00567.24	3.3e-27	1	1
ENSPKIP00000040915	TUDOR	PF00567.24	3.4e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000021866	-	3407	-	ENSPKIP00000040840	626 (aa)	XP_023646939	UPI000CD5D561
ENSPKIT00000021953	-	2327	-	ENSPKIP00000040925	590 (aa)	XP_023646940	UPI000CD65C48
ENSPKIT00000021824	-	4170	-	ENSPKIP00000040800	854 (aa)	XP_023646938	UPI000CD5D5C8
ENSPKIT00000021897	-	3249	-	ENSPKIP00000040871	547 (aa)	XP_023646941	UPI000CD5EE6A
ENSPKIT00000021943	-	1725	-	ENSPKIP00000040915	574 (aa)	-	-

Gene Model

Click here to download ENSPKIG00000017597's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000017597's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000017597	tdrkh	100	58.688	ENSAPOG00000012653	tdrkh	100	58.865	Acanthochromis_polyacanthus
ENSPKIG00000017597	tdrkh	97	57.699	ENSACIG00000010318	tdrkh	99	57.778	Amphilophus_citrinellus
ENSPKIG00000017597	tdrkh	100	59.043	ENSAOCG00000020623	tdrkh	100	59.220	Amphiprion_ocellaris
ENSPKIG00000017597	tdrkh	100	59.220	ENSAPEG00000018388	tdrkh	100	59.397	Amphiprion_percula
ENSPKIG00000017597	tdrkh	100	57.857	ENSATEG00000023809	tdrkh	100	57.857	Anabas_testudineus
ENSPKIG00000017597	tdrkh	100	57.932	ENSACLG00000003017	tdrkh	100	57.932	Astatotilapia_calliptera
ENSPKIG00000017597	tdrkh	99	63.521	ENSAMXG00000011664	tdrkh	98	60.139	Astyanax_mexicanus
ENSPKIG00000017597	tdrkh	98	54.724	ENSCSEG00000002894	tdrkh	97	56.475	Cynoglossus_semilaevis
ENSPKIG00000017597	tdrkh	62	69.048	ENSCVAG00000020347	tdrkh	78	69.048	Cyprinodon_variegatus
ENSPKIG00000017597	tdrkh	99	62.950	ENSDARG00000053474	tdrkh	100	58.768	Danio_rerio
ENSPKIG00000017597	tdrkh	100	62.148	ENSELUG00000024537	tdrkh	97	59.354	Esox_lucius
ENSPKIG00000017597	tdrkh	100	55.810	ENSFHEG00000003544	tdrkh	100	55.810	Fundulus_heteroclitus
ENSPKIG00000017597	tdrkh	99	55.696	ENSGMOG00000009304	tdrkh	94	55.696	Gadus_morhua
ENSPKIG00000017597	tdrkh	98	54.827	ENSGAFG00000010754	tdrkh	99	54.827	Gambusia_affinis
ENSPKIG00000017597	tdrkh	100	58.018	ENSGACG00000015258	tdrkh	98	53.584	Gasterosteus_aculeatus
ENSPKIG00000017597	tdrkh	100	58.289	ENSHBUG00000017609	tdrkh	100	58.289	Haplochromis_burtoni
ENSPKIG00000017597	tdrkh	99	63.024	ENSIPUG00000009673	tdrkh	99	63.024	Ictalurus_punctatus
ENSPKIG00000017597	tdrkh	100	57.040	ENSKMAG00000016638	tdrkh	93	57.040	Kryptolebias_marmoratus
ENSPKIG00000017597	tdrkh	100	58.645	ENSLBEG00000027323	tdrkh	100	55.786	Labrus_bergylta
ENSPKIG00000017597	tdrkh	99	58.047	ENSLOCG00000011381	tdrkh	99	58.047	Lepisosteus_oculatus
ENSPKIG00000017597	tdrkh	100	57.424	ENSMAMG00000020343	tdrkh	100	57.424	Mastacembelus_armatus
ENSPKIG00000017597	tdrkh	100	57.932	ENSMZEG00005006755	tdrkh	100	57.932	Maylandia_zebra
ENSPKIG00000017597	tdrkh	95	58.745	ENSMMOG00000020663	tdrkh	88	58.824	Mola_mola
ENSPKIG00000017597	tdrkh	100	58.541	ENSMALG00000015401	tdrkh	100	58.541	Monopterus_albus
ENSPKIG00000017597	tdrkh	100	56.050	ENSNBRG00000023815	tdrkh	100	56.050	Neolamprologus_brichardi
ENSPKIG00000017597	tdrkh	100	56.250	ENSORLG00000029204	tdrkh	99	56.250	Oryzias_latipes
ENSPKIG00000017597	tdrkh	93	55.725	ENSORLG00020016168	tdrkh	97	55.725	Oryzias_latipes_hni
ENSPKIG00000017597	tdrkh	97	56.932	ENSORLG00015014094	tdrkh	99	56.058	Oryzias_latipes_hsok
ENSPKIG00000017597	tdrkh	99	56.777	ENSOMEG00000015063	tdrkh	91	56.777	Oryzias_melastigma
ENSPKIG00000017597	tdrkh	99	55.596	ENSPMGG00000019362	tdrkh	99	55.596	Periophthalmus_magnuspinnatus
ENSPKIG00000017597	tdrkh	100	54.674	ENSPFOG00000013032	tdrkh	94	54.674	Poecilia_formosa
ENSPKIG00000017597	tdrkh	100	54.497	ENSPLAG00000004193	tdrkh	100	54.497	Poecilia_latipinna
ENSPKIG00000017597	tdrkh	100	54.497	ENSPMEG00000016502	tdrkh	100	54.497	Poecilia_mexicana
ENSPKIG00000017597	tdrkh	100	54.240	ENSPREG00000004213	tdrkh	94	54.240	Poecilia_reticulata
ENSPKIG00000017597	tdrkh	97	58.379	ENSPNYG00000022818	tdrkh	97	58.456	Pundamilia_nyererei
ENSPKIG00000017597	tdrkh	99	64.452	ENSPNAG00000008783	tdrkh	98	61.750	Pygocentrus_nattereri
ENSPKIG00000017597	tdrkh	100	70.182	ENSSFOG00015001048	tdrkh	100	70.909	Scleropages_formosus
ENSPKIG00000017597	tdrkh	100	56.863	ENSSMAG00000001532	tdrkh	100	57.576	Scophthalmus_maximus
ENSPKIG00000017597	tdrkh	100	57.522	ENSSDUG00000013393	tdrkh	100	58.053	Seriola_dumerili
ENSPKIG00000017597	tdrkh	100	58.053	ENSSLDG00000017418	tdrkh	100	58.584	Seriola_lalandi_dorsalis
ENSPKIG00000017597	tdrkh	100	59.397	ENSSPAG00000006435	tdrkh	95	59.503	Stegastes_partitus
ENSPKIG00000017597	tdrkh	97	56.530	ENSTRUG00000006644	tdrkh	99	55.335	Takifugu_rubripes
ENSPKIG00000017597	tdrkh	99	56.483	ENSTNIG00000003157	tdrkh	99	56.483	Tetraodon_nigroviridis
ENSPKIG00000017597	tdrkh	81	64.815	ENSXCOG00000016972	tdrkh	99	65.455	Xiphophorus_couchianus
ENSPKIG00000017597	tdrkh	100	53.792	ENSXMAG00000014756	tdrkh	100	53.792	Xiphophorus_maculatus