EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000017705 (Gene tree)
Gene ID: 111835046
Gene Symbol: zic3
Alias: -
Full Name: zinc finger protein ZIC 3-like
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Minus strand
Length: 4974 bases
Position: chrPGUA01000051.1:431380-436353
Accession: 111835046
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000040943	zf-C2H2	PF00096.26	3.5e-21	1	4
ENSPKIP00000040943	zf-C2H2	PF00096.26	3.5e-21	2	4
ENSPKIP00000040943	zf-C2H2	PF00096.26	3.5e-21	3	4
ENSPKIP00000040943	zf-C2H2	PF00096.26	3.5e-21	4	4
ENSPKIP00000040933	zf-C2H2	PF00096.26	5.5e-21	1	4
ENSPKIP00000040933	zf-C2H2	PF00096.26	5.5e-21	2	4
ENSPKIP00000040933	zf-C2H2	PF00096.26	5.5e-21	3	4
ENSPKIP00000040933	zf-C2H2	PF00096.26	5.5e-21	4	4
ENSPKIP00000040943	zf-met	PF12874.7	0.00041	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000021961	-	4084	-	ENSPKIP00000040933	448 (aa)	XP_023650722	UPI000CD6070F
ENSPKIT00000021971	-	4242	-	ENSPKIP00000040943	434 (aa)	-	-

Gene Model

Click here to download ENSPKIG00000017705's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000017705's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000017705	zic3	99	66.520	ENSPKIG00000014203	ZIC2	99	66.740

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000017705	zic3	100	73.561	ENSG00000156925	ZIC3	100	73.561	Homo_sapiens
ENSPKIG00000017705	zic3	100	73.774	ENSANAG00000019614	ZIC3	100	73.774	Aotus_nancymaae
ENSPKIG00000017705	zic3	100	73.774	ENSCJAG00000013792	ZIC3	100	73.774	Callithrix_jacchus
ENSPKIG00000017705	zic3	100	73.932	ENSCAFG00000018979	ZIC3	100	73.932	Canis_familiaris
ENSPKIG00000017705	zic3	100	71.215	ENSTSYG00000003356	ZIC3	100	71.429	Carlito_syrichta
ENSPKIG00000017705	zic3	55	86.640	ENSCPOG00000002374	ZIC3	100	86.640	Cavia_porcellus
ENSPKIG00000017705	zic3	100	73.774	ENSCCAG00000025983	ZIC3	100	73.774	Cebus_capucinus
ENSPKIG00000017705	zic3	100	74.145	ENSCATG00000036569	ZIC3	100	74.145	Cercocebus_atys
ENSPKIG00000017705	zic3	100	73.504	ENSCLAG00000001934	ZIC3	100	73.504	Chinchilla_lanigera
ENSPKIG00000017705	zic3	93	76.526	ENSCPBG00000026115	ZIC3	100	78.220	Chrysemys_picta_bellii
ENSPKIG00000017705	zic3	100	74.145	ENSCANG00000017505	ZIC3	100	74.145	Colobus_angolensis_palliatus
ENSPKIG00000017705	zic3	100	73.291	ENSCGRG00001024527	Zic3	100	73.291	Cricetulus_griseus_chok1gshd
ENSPKIG00000017705	zic3	100	73.291	ENSDORG00000025481	Zic3	100	73.291	Dipodomys_ordii
ENSPKIG00000017705	zic3	100	73.932	ENSFCAG00000025684	ZIC3	100	73.932	Felis_catus
ENSPKIG00000017705	zic3	82	77.748	ENSFDAG00000014929	ZIC3	100	86.640	Fukomys_damarensis
ENSPKIG00000017705	zic3	89	76.382	ENSGAGG00000004149	ZIC3	93	74.023	Gopherus_agassizii
ENSPKIG00000017705	zic3	100	73.504	ENSGGOG00000011914	ZIC3	100	73.504	Gorilla_gorilla
ENSPKIG00000017705	zic3	100	73.077	ENSHGLG00000006298	ZIC3	100	73.077	Heterocephalus_glaber_female
ENSPKIG00000017705	zic3	58	77.500	ENSHGLG00100002829	ZIC3	98	62.179	Heterocephalus_glaber_male
ENSPKIG00000017705	zic3	100	73.291	ENSJJAG00000022714	Zic3	100	73.291	Jaculus_jaculus
ENSPKIG00000017705	zic3	100	79.911	ENSLACG00000014597	ZIC3	100	79.911	Latimeria_chalumnae
ENSPKIG00000017705	zic3	89	74.634	ENSLAFG00000007048	ZIC3	99	76.531	Loxodonta_africana
ENSPKIG00000017705	zic3	100	74.145	ENSMFAG00000027018	ZIC3	100	74.145	Macaca_fascicularis
ENSPKIG00000017705	zic3	89	74.755	ENSMMUG00000002023	ZIC3	100	68.996	Macaca_mulatta
ENSPKIG00000017705	zic3	100	74.145	ENSMNEG00000040682	ZIC3	100	74.145	Macaca_nemestrina
ENSPKIG00000017705	zic3	100	74.145	ENSMLEG00000004378	ZIC3	100	74.145	Mandrillus_leucophaeus
ENSPKIG00000017705	zic3	100	73.504	ENSMAUG00000009402	Zic3	100	73.504	Mesocricetus_auratus
ENSPKIG00000017705	zic3	100	72.921	ENSMICG00000042529	ZIC3	100	72.921	Microcebus_murinus
ENSPKIG00000017705	zic3	100	73.662	ENSMOCG00000020544	Zic3	100	73.662	Microtus_ochrogaster
ENSPKIG00000017705	zic3	100	73.291	MGP_CAROLIEiJ_G0033101	Zic3	100	86.640	Mus_caroli
ENSPKIG00000017705	zic3	100	73.291	ENSMUSG00000067860	Zic3	100	86.640	Mus_musculus
ENSPKIG00000017705	zic3	100	73.291	MGP_PahariEiJ_G0031644	Zic3	100	86.640	Mus_pahari
ENSPKIG00000017705	zic3	100	73.291	MGP_SPRETEiJ_G0034256	Zic3	100	86.640	Mus_spretus
ENSPKIG00000017705	zic3	100	73.291	ENSNGAG00000023346	Zic3	100	73.291	Nannospalax_galili
ENSPKIG00000017705	zic3	82	84.099	ENSNLEG00000003005	-	100	70.637	Nomascus_leucogenys
ENSPKIG00000017705	zic3	100	73.718	ENSODEG00000005556	ZIC3	100	73.718	Octodon_degus
ENSPKIG00000017705	zic3	100	73.504	ENSPPAG00000030013	ZIC3	100	73.504	Pan_paniscus
ENSPKIG00000017705	zic3	100	73.561	ENSPPRG00000010839	ZIC3	100	73.561	Panthera_pardus
ENSPKIG00000017705	zic3	100	73.504	ENSPTRG00000043849	ZIC3	100	73.504	Pan_troglodytes
ENSPKIG00000017705	zic3	100	74.145	ENSPANG00000011357	ZIC3	100	74.145	Papio_anubis
ENSPKIG00000017705	zic3	65	83.562	ENSPSIG00000011896	ZIC3	99	83.562	Pelodiscus_sinensis
ENSPKIG00000017705	zic3	100	73.504	ENSPEMG00000022168	Zic3	100	73.504	Peromyscus_maniculatus_bairdii
ENSPKIG00000017705	zic3	100	73.077	ENSPCOG00000021557	ZIC3	100	73.077	Propithecus_coquereli
ENSPKIG00000017705	zic3	100	72.863	ENSRNOG00000000861	Zic3	100	72.863	Rattus_norvegicus
ENSPKIG00000017705	zic3	100	74.145	ENSRBIG00000030660	ZIC3	100	74.145	Rhinopithecus_bieti
ENSPKIG00000017705	zic3	100	74.145	ENSRROG00000028410	ZIC3	100	74.145	Rhinopithecus_roxellana
ENSPKIG00000017705	zic3	100	73.774	ENSSBOG00000024684	ZIC3	100	73.774	Saimiri_boliviensis_boliviensis
ENSPKIG00000017705	zic3	99	80.269	ENSSFOG00015008079	zic3	100	80.269	Scleropages_formosus
ENSPKIG00000017705	zic3	99	84.187	ENSSFOG00015011731	zic3	100	84.187	Scleropages_formosus
ENSPKIG00000017705	zic3	84	75.907	ENSTGUG00000002155	ZIC3	99	77.778	Taeniopygia_guttata
ENSPKIG00000017705	zic3	100	73.932	ENSVVUG00000021378	ZIC3	100	73.932	Vulpes_vulpes
ENSPKIG00000017705	zic3	100	77.111	ENSXETG00000024458	zic3	100	77.111	Xenopus_tropicalis