EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000017932 (Gene tree)
Gene ID: 111855902
Gene Symbol: -
Alias: -
Full Name: protein LSM12 homolog A-like
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Plus strand
Length: 6109 bases
Position: chrPGUA01000031.1:835278-841386
Accession: 111855902
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000041339	AD	PF09793.9	6.2e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000022374	-	1777	XM_023835376	ENSPKIP00000041339	196 (aa)	XP_023691144	UPI000CD5FDA0

Gene Model

Click here to download ENSPKIG00000017932's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000017932's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000017932	-	100	83.673	ENSPKIG00000021058	lsm12b	100	83.673

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000017932	-	99	76.804	ENSG00000161654	LSM12	99	76.804	Homo_sapiens
ENSPKIG00000017932	-	100	84.694	ENSAPOG00000007907	lsm12b	100	84.694	Acanthochromis_polyacanthus
ENSPKIG00000017932	-	99	75.127	ENSAMEG00000018321	LSM12	99	75.127	Ailuropoda_melanoleuca
ENSPKIG00000017932	-	100	82.653	ENSACIG00000008538	lsm12b	100	82.653	Amphilophus_citrinellus
ENSPKIG00000017932	-	100	84.184	ENSAOCG00000021847	lsm12b	88	84.184	Amphiprion_ocellaris
ENSPKIG00000017932	-	100	84.184	ENSAPEG00000002252	lsm12b	100	84.184	Amphiprion_percula
ENSPKIG00000017932	-	100	83.673	ENSATEG00000005705	lsm12b	100	83.673	Anabas_testudineus
ENSPKIG00000017932	-	98	76.562	ENSACAG00000004618	LSM12	99	76.562	Anolis_carolinensis
ENSPKIG00000017932	-	99	76.804	ENSANAG00000029011	LSM12	99	76.804	Aotus_nancymaae
ENSPKIG00000017932	-	100	82.653	ENSACLG00000026332	lsm12b	100	82.653	Astatotilapia_calliptera
ENSPKIG00000017932	-	100	83.673	ENSAMXG00000032952	lsm12b	100	83.673	Astyanax_mexicanus
ENSPKIG00000017932	-	100	78.571	ENSAMXG00000036117	lsm12a	91	78.571	Astyanax_mexicanus
ENSPKIG00000017932	-	99	76.804	ENSBTAG00000016252	LSM12	99	76.804	Bos_taurus
ENSPKIG00000017932	-	99	76.804	ENSCJAG00000048480	LSM12	99	76.804	Callithrix_jacchus
ENSPKIG00000017932	-	99	76.804	ENSCAFG00000014379	LSM12	91	76.804	Canis_familiaris
ENSPKIG00000017932	-	99	76.804	ENSCAFG00020012173	LSM12	99	76.804	Canis_lupus_dingo
ENSPKIG00000017932	-	99	76.804	ENSCHIG00000018175	LSM12	99	76.804	Capra_hircus
ENSPKIG00000017932	-	99	76.804	ENSTSYG00000036361	LSM12	99	76.804	Carlito_syrichta
ENSPKIG00000017932	-	79	75.974	ENSCAPG00000009647	LSM12	84	75.974	Cavia_aperea
ENSPKIG00000017932	-	99	76.804	ENSCPOG00000012860	LSM12	99	76.804	Cavia_porcellus
ENSPKIG00000017932	-	99	76.804	ENSCCAG00000032905	LSM12	99	76.804	Cebus_capucinus
ENSPKIG00000017932	-	99	76.804	ENSCATG00000030577	-	99	76.804	Cercocebus_atys
ENSPKIG00000017932	-	99	77.320	ENSCLAG00000015759	LSM12	99	77.320	Chinchilla_lanigera
ENSPKIG00000017932	-	99	76.289	ENSCSAG00000003486	LSM12	99	76.289	Chlorocebus_sabaeus
ENSPKIG00000017932	-	56	75.229	ENSCHOG00000001198	LSM12	100	75.229	Choloepus_hoffmanni
ENSPKIG00000017932	-	98	76.562	ENSCPBG00000027105	LSM12	99	76.562	Chrysemys_picta_bellii
ENSPKIG00000017932	-	99	76.804	ENSCANG00000043328	LSM12	99	76.804	Colobus_angolensis_palliatus
ENSPKIG00000017932	-	99	76.804	ENSCGRG00001002094	Lsm12	99	76.804	Cricetulus_griseus_chok1gshd
ENSPKIG00000017932	-	89	69.540	ENSCGRG00000004316	Lsm12	98	69.540	Cricetulus_griseus_crigri
ENSPKIG00000017932	-	100	83.163	ENSCSEG00000008434	lsm12b	100	83.163	Cynoglossus_semilaevis
ENSPKIG00000017932	-	100	84.184	ENSCVAG00000008755	lsm12b	100	84.184	Cyprinodon_variegatus
ENSPKIG00000017932	-	100	83.163	ENSDARG00000109510	lsm12b	100	83.163	Danio_rerio
ENSPKIG00000017932	-	100	83.673	ENSDARG00000028848	lsm12a	100	83.673	Danio_rerio
ENSPKIG00000017932	-	99	76.804	ENSDNOG00000002418	LSM12	91	76.804	Dasypus_novemcinctus
ENSPKIG00000017932	-	99	76.804	ENSDORG00000016381	Lsm12	99	76.804	Dipodomys_ordii
ENSPKIG00000017932	-	83	33.735	FBgn0030364	Lsm12	80	33.333	Drosophila_melanogaster
ENSPKIG00000017932	-	78	31.138	FBgn0036057	CG14164	87	31.138	Drosophila_melanogaster
ENSPKIG00000017932	-	88	68.208	ENSETEG00000011012	-	99	68.208	Echinops_telfairi
ENSPKIG00000017932	-	99	76.289	ENSETEG00000008374	LSM12	99	76.289	Echinops_telfairi
ENSPKIG00000017932	-	83	64.417	ENSEBUG00000016299	lsm12a	91	64.417	Eptatretus_burgeri
ENSPKIG00000017932	-	99	76.804	ENSEASG00005010155	LSM12	99	76.804	Equus_asinus_asinus
ENSPKIG00000017932	-	99	76.804	ENSECAG00000009071	LSM12	99	76.804	Equus_caballus
ENSPKIG00000017932	-	78	75.163	ENSEEUG00000002419	-	100	75.163	Erinaceus_europaeus
ENSPKIG00000017932	-	100	82.653	ENSELUG00000015538	lsm12b	100	78.061	Esox_lucius
ENSPKIG00000017932	-	100	82.143	ENSELUG00000000256	-	100	82.143	Esox_lucius
ENSPKIG00000017932	-	99	76.804	ENSFCAG00000037021	LSM12	99	76.804	Felis_catus
ENSPKIG00000017932	-	76	76.351	ENSFDAG00000008954	LSM12	87	76.351	Fukomys_damarensis
ENSPKIG00000017932	-	100	83.163	ENSFHEG00000019913	lsm12b	100	83.163	Fundulus_heteroclitus
ENSPKIG00000017932	-	81	81.646	ENSGMOG00000015449	lsm12b	100	81.646	Gadus_morhua
ENSPKIG00000017932	-	78	74.510	ENSGALG00000039803	LSM12	100	74.510	Gallus_gallus
ENSPKIG00000017932	-	100	83.673	ENSGAFG00000011829	lsm12b	100	83.673	Gambusia_affinis
ENSPKIG00000017932	-	81	82.278	ENSGACG00000003428	lsm12b	100	82.278	Gasterosteus_aculeatus
ENSPKIG00000017932	-	98	76.562	ENSGAGG00000021965	LSM12	99	76.562	Gopherus_agassizii
ENSPKIG00000017932	-	99	76.804	ENSGGOG00000010589	-	99	76.804	Gorilla_gorilla
ENSPKIG00000017932	-	85	85.629	ENSHBUG00000007667	lsm12b	74	85.629	Haplochromis_burtoni
ENSPKIG00000017932	-	99	76.804	ENSHGLG00000011411	LSM12	99	76.804	Heterocephalus_glaber_female
ENSPKIG00000017932	-	81	73.418	ENSHGLG00100000241	LSM12	84	73.418	Heterocephalus_glaber_male
ENSPKIG00000017932	-	100	83.163	ENSHCOG00000002094	lsm12b	100	83.163	Hippocampus_comes
ENSPKIG00000017932	-	100	81.633	ENSIPUG00000014800	lsm12	100	81.633	Ictalurus_punctatus
ENSPKIG00000017932	-	99	75.258	ENSIPUG00000008936	lsm12a	99	75.258	Ictalurus_punctatus
ENSPKIG00000017932	-	99	76.804	ENSSTOG00000007403	LSM12	99	76.804	Ictidomys_tridecemlineatus
ENSPKIG00000017932	-	80	69.182	ENSJJAG00000014652	-	95	69.182	Jaculus_jaculus
ENSPKIG00000017932	-	99	76.804	ENSJJAG00000004364	-	99	76.804	Jaculus_jaculus
ENSPKIG00000017932	-	96	67.895	ENSJJAG00000011793	-	100	67.895	Jaculus_jaculus
ENSPKIG00000017932	-	85	86.228	ENSKMAG00000007704	lsm12b	56	86.228	Kryptolebias_marmoratus
ENSPKIG00000017932	-	100	84.694	ENSLBEG00000027999	lsm12b	100	84.694	Labrus_bergylta
ENSPKIG00000017932	-	98	78.646	ENSLACG00000015981	LSM12	99	78.646	Latimeria_chalumnae
ENSPKIG00000017932	-	100	80.102	ENSLOCG00000013079	lsm12b	99	80.102	Lepisosteus_oculatus
ENSPKIG00000017932	-	99	76.804	ENSLAFG00000005202	LSM12	99	76.804	Loxodonta_africana
ENSPKIG00000017932	-	99	76.804	ENSMFAG00000031376	LSM12	99	76.804	Macaca_fascicularis
ENSPKIG00000017932	-	99	76.804	ENSMMUG00000006804	LSM12	99	76.804	Macaca_mulatta
ENSPKIG00000017932	-	99	76.804	ENSMNEG00000030594	-	99	76.804	Macaca_nemestrina
ENSPKIG00000017932	-	99	76.804	ENSMLEG00000039934	LSM12	99	76.804	Mandrillus_leucophaeus
ENSPKIG00000017932	-	100	84.694	ENSMAMG00000004279	lsm12b	100	84.694	Mastacembelus_armatus
ENSPKIG00000017932	-	100	82.653	ENSMZEG00005005754	lsm12b	100	82.653	Maylandia_zebra
ENSPKIG00000017932	-	99	76.289	ENSMICG00000037219	LSM12	99	76.289	Microcebus_murinus
ENSPKIG00000017932	-	99	76.804	ENSMOCG00000019878	-	99	76.804	Microtus_ochrogaster
ENSPKIG00000017932	-	99	68.557	ENSMOCG00000017015	-	85	68.557	Microtus_ochrogaster
ENSPKIG00000017932	-	100	84.184	ENSMMOG00000020848	lsm12b	100	84.184	Mola_mola
ENSPKIG00000017932	-	100	83.673	ENSMALG00000007578	lsm12b	100	83.673	Monopterus_albus
ENSPKIG00000017932	-	99	76.804	MGP_CAROLIEiJ_G0017241	Lsm12	99	76.804	Mus_caroli
ENSPKIG00000017932	-	99	76.804	ENSMUSG00000020922	Lsm12	99	76.804	Mus_musculus
ENSPKIG00000017932	-	99	70.616	MGP_PahariEiJ_G0018371	Lsm12	99	74.775	Mus_pahari
ENSPKIG00000017932	-	99	76.289	MGP_SPRETEiJ_G0018084	Lsm12	99	76.289	Mus_spretus
ENSPKIG00000017932	-	99	77.320	ENSMLUG00000006391	LSM12	99	77.320	Myotis_lucifugus
ENSPKIG00000017932	-	97	54.040	ENSNGAG00000015429	-	98	54.040	Nannospalax_galili
ENSPKIG00000017932	-	99	76.804	ENSNGAG00000001870	Lsm12	99	76.804	Nannospalax_galili
ENSPKIG00000017932	-	100	82.653	ENSNBRG00000006266	lsm12b	100	82.653	Neolamprologus_brichardi
ENSPKIG00000017932	-	99	76.804	ENSNLEG00000005580	-	99	76.804	Nomascus_leucogenys
ENSPKIG00000017932	-	84	79.268	ENSMEUG00000007501	-	99	79.268	Notamacropus_eugenii
ENSPKIG00000017932	-	99	76.804	ENSOPRG00000008552	LSM12	99	76.804	Ochotona_princeps
ENSPKIG00000017932	-	99	70.619	ENSODEG00000007886	-	74	70.619	Octodon_degus
ENSPKIG00000017932	-	99	77.320	ENSODEG00000017998	-	99	77.320	Octodon_degus
ENSPKIG00000017932	-	100	82.653	ENSONIG00000007933	lsm12b	100	82.653	Oreochromis_niloticus
ENSPKIG00000017932	-	99	75.127	ENSOCUG00000008566	-	99	75.127	Oryctolagus_cuniculus
ENSPKIG00000017932	-	96	72.487	ENSOCUG00000027889	-	97	72.487	Oryctolagus_cuniculus
ENSPKIG00000017932	-	96	74.074	ENSOCUG00000021254	-	97	74.074	Oryctolagus_cuniculus
ENSPKIG00000017932	-	96	74.074	ENSOCUG00000024823	-	97	74.074	Oryctolagus_cuniculus
ENSPKIG00000017932	-	100	84.184	ENSORLG00000011310	lsm12b	100	84.184	Oryzias_latipes
ENSPKIG00000017932	-	100	84.184	ENSORLG00020002060	lsm12b	92	84.184	Oryzias_latipes_hni
ENSPKIG00000017932	-	100	84.184	ENSORLG00015001647	lsm12b	92	84.184	Oryzias_latipes_hsok
ENSPKIG00000017932	-	100	84.184	ENSOMEG00000006184	lsm12b	92	84.184	Oryzias_melastigma
ENSPKIG00000017932	-	99	76.289	ENSOGAG00000010489	LSM12	99	76.289	Otolemur_garnettii
ENSPKIG00000017932	-	99	74.000	ENSOARG00000006589	LSM12	99	74.000	Ovis_aries
ENSPKIG00000017932	-	99	67.526	ENSPPAG00000034974	-	99	67.526	Pan_paniscus
ENSPKIG00000017932	-	99	76.804	ENSPPRG00000023420	LSM12	99	76.804	Panthera_pardus
ENSPKIG00000017932	-	78	75.817	ENSPTIG00000012704	-	82	75.817	Panthera_tigris_altaica
ENSPKIG00000017932	-	72	72.973	ENSPTIG00000014850	-	99	72.973	Panthera_tigris_altaica
ENSPKIG00000017932	-	99	76.804	ENSPTRG00000009261	LSM12	99	76.804	Pan_troglodytes
ENSPKIG00000017932	-	99	76.804	ENSPANG00000021315	-	99	76.804	Papio_anubis
ENSPKIG00000017932	-	100	83.163	ENSPMGG00000021344	lsm12b	100	83.163	Periophthalmus_magnuspinnatus
ENSPKIG00000017932	-	99	76.804	ENSPEMG00000012199	Lsm12	99	76.804	Peromyscus_maniculatus_bairdii
ENSPKIG00000017932	-	87	67.251	ENSPMAG00000005461	lsm12a	98	67.251	Petromyzon_marinus
ENSPKIG00000017932	-	99	76.289	ENSPCIG00000020244	LSM12	99	76.289	Phascolarctos_cinereus
ENSPKIG00000017932	-	100	83.163	ENSPFOG00000015930	lsm12b	100	83.163	Poecilia_formosa
ENSPKIG00000017932	-	100	83.163	ENSPLAG00000021089	lsm12b	100	83.163	Poecilia_latipinna
ENSPKIG00000017932	-	100	83.163	ENSPMEG00000012961	lsm12b	100	83.163	Poecilia_mexicana
ENSPKIG00000017932	-	87	83.041	ENSPREG00000010236	lsm12b	95	83.041	Poecilia_reticulata
ENSPKIG00000017932	-	99	76.804	ENSPPYG00000008344	LSM12	99	76.804	Pongo_abelii
ENSPKIG00000017932	-	81	79.874	ENSPCAG00000008790	LSM12	100	79.874	Procavia_capensis
ENSPKIG00000017932	-	99	76.804	ENSPCOG00000027951	LSM12	99	76.804	Propithecus_coquereli
ENSPKIG00000017932	-	99	76.289	ENSPVAG00000013706	LSM12	99	76.289	Pteropus_vampyrus
ENSPKIG00000017932	-	100	82.653	ENSPNYG00000003386	lsm12b	100	82.653	Pundamilia_nyererei
ENSPKIG00000017932	-	100	80.612	ENSPNAG00000004186	lsm12b	100	80.612	Pygocentrus_nattereri
ENSPKIG00000017932	-	100	78.061	ENSPNAG00000018435	lsm12a	100	78.061	Pygocentrus_nattereri
ENSPKIG00000017932	-	99	76.804	ENSRNOG00000020894	Lsm12	99	76.804	Rattus_norvegicus
ENSPKIG00000017932	-	99	76.804	ENSRBIG00000027910	LSM12	99	76.804	Rhinopithecus_bieti
ENSPKIG00000017932	-	99	76.804	ENSRROG00000045530	-	97	79.641	Rhinopithecus_roxellana
ENSPKIG00000017932	-	99	76.804	ENSSBOG00000025310	LSM12	99	76.804	Saimiri_boliviensis_boliviensis
ENSPKIG00000017932	-	81	74.051	ENSSHAG00000014914	LSM12	100	74.051	Sarcophilus_harrisii
ENSPKIG00000017932	-	100	82.143	ENSSFOG00015009612	lsm12	100	82.143	Scleropages_formosus
ENSPKIG00000017932	-	100	86.224	ENSSFOG00015020392	lsm12a	100	86.224	Scleropages_formosus
ENSPKIG00000017932	-	100	83.673	ENSSMAG00000008089	lsm12b	100	83.673	Scophthalmus_maximus
ENSPKIG00000017932	-	100	83.673	ENSSDUG00000012711	lsm12b	100	83.673	Seriola_dumerili
ENSPKIG00000017932	-	100	83.673	ENSSLDG00000007404	lsm12b	100	83.673	Seriola_lalandi_dorsalis
ENSPKIG00000017932	-	78	75.817	ENSSARG00000005537	LSM12	100	75.817	Sorex_araneus
ENSPKIG00000017932	-	98	76.042	ENSSPUG00000011984	LSM12	99	76.042	Sphenodon_punctatus
ENSPKIG00000017932	-	100	84.184	ENSSPAG00000017058	lsm12b	100	84.184	Stegastes_partitus
ENSPKIG00000017932	-	99	76.804	ENSSSCG00000032394	LSM12	99	76.804	Sus_scrofa
ENSPKIG00000017932	-	100	83.673	ENSTRUG00000007121	lsm12b	100	83.673	Takifugu_rubripes
ENSPKIG00000017932	-	100	85.204	ENSTNIG00000014436	lsm12b	100	85.204	Tetraodon_nigroviridis
ENSPKIG00000017932	-	99	74.227	ENSTBEG00000012392	-	99	74.227	Tupaia_belangeri
ENSPKIG00000017932	-	99	76.289	ENSTBEG00000012523	-	99	76.289	Tupaia_belangeri
ENSPKIG00000017932	-	99	76.804	ENSTTRG00000010433	LSM12	99	76.804	Tursiops_truncatus
ENSPKIG00000017932	-	99	76.804	ENSUAMG00000006313	LSM12	99	76.804	Ursus_americanus
ENSPKIG00000017932	-	79	75.325	ENSUMAG00000012987	LSM12	88	75.325	Ursus_maritimus
ENSPKIG00000017932	-	99	71.134	ENSVPAG00000011145	LSM12	99	71.134	Vicugna_pacos
ENSPKIG00000017932	-	99	76.804	ENSVVUG00000017581	LSM12	99	76.804	Vulpes_vulpes
ENSPKIG00000017932	-	56	73.394	ENSXETG00000003371	lsm12	55	73.394	Xenopus_tropicalis
ENSPKIG00000017932	-	100	83.673	ENSXCOG00000003994	lsm12b	100	83.673	Xiphophorus_couchianus
ENSPKIG00000017932	-	100	83.673	ENSXMAG00000020950	lsm12b	100	83.673	Xiphophorus_maculatus