EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPKIG00000018052 (Gene tree)
Gene ID
111835614
Gene Symbol
pabpn1
Alias
-
Full Name
polyadenylate-binding protein 2-B-like
Gene Type
protein_coding
Species
Paramormyrops_kingsleyae
Status
putative
Strand
Minus strand
Length
7159 bases
Position
chrPGUA01000525.1:32358-39516
Accession
111835614
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPKIP00000041552RRM_1PF00076.222e-1711
ENSPKIP00000041532RRM_1PF00076.223.1e-1711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPKIT00000022587-1341-ENSPKIP00000041552233 (aa)XP_023651879UPI000CD64CA6
ENSPKIT00000022567-1455-ENSPKIP00000041532284 (aa)XP_023651877UPI000CD5D3CF
Gene Model
Click here to download ENSPKIG00000018052's gene model file
Pathways
Pathway IDPathway NameSource
pki03015mRNA surveillance pathwayKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000018052's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPKIG00000018052pabpn17169.880ENSPKIG00000008340pabpn1l9258.937
ENSPKIG00000018052pabpn19993.478ENSPKIG00000008144-10089.161
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPKIG00000018052pabpn18184.211ENSG00000258643BCL2L2-PABPN15784.211Homo_sapiens
ENSPKIG00000018052pabpn18682.524ENSG00000100836PABPN19383.439Homo_sapiens
ENSPKIG00000018052pabpn110095.279ENSAPOG00000016425pabpn110091.845Acanthochromis_polyacanthus
ENSPKIG00000018052pabpn18184.211ENSAMEG00000007048BCL2L2-PABPN110084.211Ailuropoda_melanoleuca
ENSPKIG00000018052pabpn110090.278ENSACIG00000021744pabpn110087.500Amphilophus_citrinellus
ENSPKIG00000018052pabpn110095.279ENSAOCG00000015805pabpn110091.845Amphiprion_ocellaris
ENSPKIG00000018052pabpn110095.279ENSAPEG00000009623pabpn110091.845Amphiprion_percula
ENSPKIG00000018052pabpn110095.708ENSATEG00000020531pabpn110092.275Anabas_testudineus
ENSPKIG00000018052pabpn18185.263ENSACAG00000006185-7480.000Anolis_carolinensis
ENSPKIG00000018052pabpn18483.838ENSANAG00000024513-8474.477Aotus_nancymaae
ENSPKIG00000018052pabpn110089.965ENSACLG00000016374pabpn110087.197Astatotilapia_calliptera
ENSPKIG00000018052pabpn110095.708ENSAMXG00000000452pabpn110095.708Astyanax_mexicanus
ENSPKIG00000018052pabpn17485.057ENSBTAG00000050594-6687.952Bos_taurus
ENSPKIG00000018052pabpn18282.812ENSBTAG00000053753-7182.812Bos_taurus
ENSPKIG00000018052pabpn18483.838ENSBTAG00000006884PABPN18669.318Bos_taurus
ENSPKIG00000018052pabpn16856.522WBGene00003904pabp-27159.589Caenorhabditis_elegans
ENSPKIG00000018052pabpn19975.966ENSCJAG00000007960-8476.395Callithrix_jacchus
ENSPKIG00000018052pabpn17180.357ENSCJAG00000004407-8480.357Callithrix_jacchus
ENSPKIG00000018052pabpn18682.524ENSCAFG00000011482PABPN18670.455Canis_familiaris
ENSPKIG00000018052pabpn18682.524ENSCAFG00020006651-6881.818Canis_lupus_dingo
ENSPKIG00000018052pabpn18682.524ENSCAFG00020007298-6881.818Canis_lupus_dingo
ENSPKIG00000018052pabpn18682.524ENSCHIG00000012184PABPN16881.818Capra_hircus
ENSPKIG00000018052pabpn18184.211ENSTSYG00000033996BCL2L2-PABPN19482.143Carlito_syrichta
ENSPKIG00000018052pabpn16082.857ENSCAPG00000009461-9982.857Cavia_aperea
ENSPKIG00000018052pabpn18682.039ENSCPOG00000025574PABPN16881.340Cavia_porcellus
ENSPKIG00000018052pabpn19975.966ENSCCAG00000033954BCL2L2-PABPN18476.395Cebus_capucinus
ENSPKIG00000018052pabpn19975.966ENSCATG00000038536BCL2L2-PABPN18476.395Cercocebus_atys
ENSPKIG00000018052pabpn16581.457ENSCLAG00000012423PABPN15681.457Chinchilla_lanigera
ENSPKIG00000018052pabpn18681.068ENSCSAG00000016036PABPN16880.383Chlorocebus_sabaeus
ENSPKIG00000018052pabpn18972.857ENSCHOG00000004798BCL2L2-PABPN18872.857Choloepus_hoffmanni
ENSPKIG00000018052pabpn17183.333ENSCPBG00000026060-9483.333Chrysemys_picta_bellii
ENSPKIG00000018052pabpn19059.434ENSCING00000012468-8958.296Ciona_intestinalis
ENSPKIG00000018052pabpn17660.894ENSCSAVG00000002001-9358.101Ciona_savignyi
ENSPKIG00000018052pabpn18184.211ENSCANG00000009750BCL2L2-PABPN19482.143Colobus_angolensis_palliatus
ENSPKIG00000018052pabpn18571.212ENSCANG00000030980-8763.025Colobus_angolensis_palliatus
ENSPKIG00000018052pabpn18683.010ENSCGRG00001019696Pabpn19482.738Cricetulus_griseus_chok1gshd
ENSPKIG00000018052pabpn16293.197ENSCGRG00000011102Pabpn19193.197Cricetulus_griseus_crigri
ENSPKIG00000018052pabpn110094.421ENSCSEG00000008774pabpn110091.416Cynoglossus_semilaevis
ENSPKIG00000018052pabpn110088.034ENSCVAG00000003152pabpn110088.841Cyprinodon_variegatus
ENSPKIG00000018052pabpn110094.850ENSDARG00000045373pabpn110092.308Danio_rerio
ENSPKIG00000018052pabpn18154.255ENSDARG00000087996pabpn1l7268.376Danio_rerio
ENSPKIG00000018052pabpn18682.524ENSDNOG00000023682PABPN16881.818Dasypus_novemcinctus
ENSPKIG00000018052pabpn15683.459ENSDORG00000023928-8582.787Dipodomys_ordii
ENSPKIG00000018052pabpn18681.553ENSDORG00000028966-6880.861Dipodomys_ordii
ENSPKIG00000018052pabpn110057.741FBgn0005648Pabp210055.230Drosophila_melanogaster
ENSPKIG00000018052pabpn19971.552ENSEBUG00000002322pabpn19971.552Eptatretus_burgeri
ENSPKIG00000018052pabpn18682.524ENSEASG00005011716PABPN16881.818Equus_asinus_asinus
ENSPKIG00000018052pabpn18581.863ENSECAG00000011652PABPN16782.828Equus_caballus
ENSPKIG00000018052pabpn18679.612ENSEEUG00000012973-7178.947Erinaceus_europaeus
ENSPKIG00000018052pabpn110092.827ENSELUG00000022654pabpn110092.827Esox_lucius
ENSPKIG00000018052pabpn18682.524ENSFCAG00000031922PABPN16881.818Felis_catus
ENSPKIG00000018052pabpn17182.143ENSFDAG00000018381BCL2L2-PABPN19482.143Fukomys_damarensis
ENSPKIG00000018052pabpn110091.416ENSFHEG00000007215pabpn110089.700Fundulus_heteroclitus
ENSPKIG00000018052pabpn19595.928ENSGMOG00000003922pabpn110090.559Gadus_morhua
ENSPKIG00000018052pabpn18383.333ENSGALG00000052930-6179.904Gallus_gallus
ENSPKIG00000018052pabpn110093.590ENSGAFG00000017099pabpn110091.880Gambusia_affinis
ENSPKIG00000018052pabpn110089.860ENSGACG00000002167pabpn110088.259Gasterosteus_aculeatus
ENSPKIG00000018052pabpn19975.966ENSGGOG00000022683-8476.395Gorilla_gorilla
ENSPKIG00000018052pabpn18771.154ENSGGOG00000025919-9869.128Gorilla_gorilla
ENSPKIG00000018052pabpn18969.712ENSGGOG00000039675-9165.417Gorilla_gorilla
ENSPKIG00000018052pabpn110094.850ENSHBUG00000019523pabpn110091.845Haplochromis_burtoni
ENSPKIG00000018052pabpn19168.075ENSHGLG00000018588-6276.923Heterocephalus_glaber_female
ENSPKIG00000018052pabpn18682.039ENSHGLG00000002927-9291.837Heterocephalus_glaber_female
ENSPKIG00000018052pabpn17163.095ENSHGLG00000009842-9361.404Heterocephalus_glaber_female
ENSPKIG00000018052pabpn17173.837ENSHGLG00100018935-9470.833Heterocephalus_glaber_male
ENSPKIG00000018052pabpn17684.916ENSHGLG00100006673-9291.837Heterocephalus_glaber_male
ENSPKIG00000018052pabpn19168.075ENSHGLG00100015565-7867.317Heterocephalus_glaber_male
ENSPKIG00000018052pabpn110093.991ENSHCOG00000004655pabpn110090.987Hippocampus_comes
ENSPKIG00000018052pabpn110095.279ENSIPUG00000008085PABPN110091.845Ictalurus_punctatus
ENSPKIG00000018052pabpn110088.412ENSIPUG00000000180-9985.837Ictalurus_punctatus
ENSPKIG00000018052pabpn17182.143ENSSTOG00000029847BCL2L2-PABPN19482.143Ictidomys_tridecemlineatus
ENSPKIG00000018052pabpn17182.143ENSJJAG00000023507Gm205219482.143Jaculus_jaculus
ENSPKIG00000018052pabpn110094.017ENSKMAG00000018748pabpn110091.453Kryptolebias_marmoratus
ENSPKIG00000018052pabpn110095.708ENSLBEG00000027266pabpn110092.275Labrus_bergylta
ENSPKIG00000018052pabpn17688.889ENSLACG00000000646pabpn18282.632Latimeria_chalumnae
ENSPKIG00000018052pabpn19066.047ENSLOCG00000004694pabpn1l9961.682Lepisosteus_oculatus
ENSPKIG00000018052pabpn110091.958ENSLOCG00000000796pabpn110090.210Lepisosteus_oculatus
ENSPKIG00000018052pabpn16582.237ENSLAFG00000031227-10082.237Loxodonta_africana
ENSPKIG00000018052pabpn18184.211ENSMFAG00000032183BCL2L2-PABPN19482.143Macaca_fascicularis
ENSPKIG00000018052pabpn16174.648ENSMFAG00000031355-9974.648Macaca_fascicularis
ENSPKIG00000018052pabpn18667.805ENSMMUG00000048382-6967.619Macaca_mulatta
ENSPKIG00000018052pabpn18184.211ENSMMUG00000014747BCL2L2-PABPN110081.633Macaca_mulatta
ENSPKIG00000018052pabpn17968.449ENSMNEG00000035750-9974.648Macaca_nemestrina
ENSPKIG00000018052pabpn19975.966ENSMNEG00000045065BCL2L2-PABPN18476.395Macaca_nemestrina
ENSPKIG00000018052pabpn17265.868ENSMLEG00000034623-9969.014Mandrillus_leucophaeus
ENSPKIG00000018052pabpn18184.211ENSMLEG00000043862BCL2L2-PABPN19482.143Mandrillus_leucophaeus
ENSPKIG00000018052pabpn19994.348ENSMAMG00000007979pabpn110088.732Mastacembelus_armatus
ENSPKIG00000018052pabpn110091.259ENSMZEG00005011904pabpn110088.462Maylandia_zebra
ENSPKIG00000018052pabpn18683.010ENSMAUG00000007383Gm205217082.297Mesocricetus_auratus
ENSPKIG00000018052pabpn19976.395ENSMICG00000010002BCL2L2-PABPN18476.395Microcebus_murinus
ENSPKIG00000018052pabpn18682.524ENSMOCG00000018557Gm205219093.197Microtus_ochrogaster
ENSPKIG00000018052pabpn110095.279ENSMMOG00000005405pabpn110092.275Mola_mola
ENSPKIG00000018052pabpn18581.773ENSMODG00000004535-6781.068Monodelphis_domestica
ENSPKIG00000018052pabpn19994.783ENSMALG00000019612pabpn110088.811Monopterus_albus
ENSPKIG00000018052pabpn18682.039MGP_CAROLIEiJ_G0019277Pabpn19092.517Mus_caroli
ENSPKIG00000018052pabpn19971.915MGP_CAROLIEiJ_G0019276Gm205215783.684Mus_caroli
ENSPKIG00000018052pabpn18184.211ENSMUSG00000092232Gm205215784.211Mus_musculus
ENSPKIG00000018052pabpn18682.524ENSMUSG00000022194Pabpn19092.517Mus_musculus
ENSPKIG00000018052pabpn18682.524MGP_PahariEiJ_G0030295Pabpn110097.619Mus_pahari
ENSPKIG00000018052pabpn18184.211MGP_PahariEiJ_G0030294Gm205215784.211Mus_pahari
ENSPKIG00000018052pabpn18682.524MGP_SPRETEiJ_G0020166Pabpn19092.517Mus_spretus
ENSPKIG00000018052pabpn18184.211MGP_SPRETEiJ_G0020165Gm205215784.211Mus_spretus
ENSPKIG00000018052pabpn16783.439ENSMPUG00000006775-9383.439Mustela_putorius_furo
ENSPKIG00000018052pabpn18480.303ENSMLUG00000028677-8572.034Myotis_lucifugus
ENSPKIG00000018052pabpn18182.105ENSMLUG00000003800-10082.105Myotis_lucifugus
ENSPKIG00000018052pabpn18878.571ENSMLUG00000012452-6978.571Myotis_lucifugus
ENSPKIG00000018052pabpn18184.211ENSNGAG00000019529Gm205215784.211Nannospalax_galili
ENSPKIG00000018052pabpn110091.608ENSNBRG00000023955pabpn110088.811Neolamprologus_brichardi
ENSPKIG00000018052pabpn18669.417ENSNLEG00000030598-7766.029Nomascus_leucogenys
ENSPKIG00000018052pabpn16461.745ENSNLEG00000035292-9957.718Nomascus_leucogenys
ENSPKIG00000018052pabpn18682.524ENSNLEG00000015007-7481.818Nomascus_leucogenys
ENSPKIG00000018052pabpn17672.067ENSODEG00000011555-8970.833Octodon_degus
ENSPKIG00000018052pabpn18673.529ENSODEG00000003739-7072.464Octodon_degus
ENSPKIG00000018052pabpn18682.039ENSODEG00000002083BCL2L2-PABPN16881.340Octodon_degus
ENSPKIG00000018052pabpn110091.608ENSONIG00000008112pabpn110088.811Oreochromis_niloticus
ENSPKIG00000018052pabpn16382.993ENSOANG00000009218-10082.993Ornithorhynchus_anatinus
ENSPKIG00000018052pabpn18682.039ENSOCUG00000016174PABPN17681.340Oryctolagus_cuniculus
ENSPKIG00000018052pabpn19994.783ENSORLG00000027900pabpn110089.161Oryzias_latipes
ENSPKIG00000018052pabpn19994.783ENSORLG00020004681pabpn110086.735Oryzias_latipes_hni
ENSPKIG00000018052pabpn110095.279ENSORLG00015000018pabpn110092.275Oryzias_latipes_hsok
ENSPKIG00000018052pabpn110091.958ENSOMEG00000016618pabpn110088.811Oryzias_melastigma
ENSPKIG00000018052pabpn18682.524ENSOGAG00000008710PABPN16881.818Otolemur_garnettii
ENSPKIG00000018052pabpn18184.211ENSOARG00000019336BCL2L2-PABPN15284.211Ovis_aries
ENSPKIG00000018052pabpn17167.470ENSPPAG00000039421-9367.470Pan_paniscus
ENSPKIG00000018052pabpn18184.211ENSPPAG00000028984BCL2L2-PABPN19383.439Pan_paniscus
ENSPKIG00000018052pabpn18682.524ENSPPRG00000010567PABPN16881.818Panthera_pardus
ENSPKIG00000018052pabpn17182.143ENSPTIG00000001063BCL2L2-PABPN19482.143Panthera_tigris_altaica
ENSPKIG00000018052pabpn110063.248ENSPTRG00000047273-9360.317Pan_troglodytes
ENSPKIG00000018052pabpn19975.966ENSPTRG00000006167BCL2L28476.395Pan_troglodytes
ENSPKIG00000018052pabpn19975.966ENSPANG00000021100BCL2L2-PABPN18476.395Papio_anubis
ENSPKIG00000018052pabpn18469.192ENSPANG00000023326-9975.352Papio_anubis
ENSPKIG00000018052pabpn19892.208ENSPMGG00000022027pabpn110084.859Periophthalmus_magnuspinnatus
ENSPKIG00000018052pabpn18683.010ENSPEMG00000008332Gm205218993.197Peromyscus_maniculatus_bairdii
ENSPKIG00000018052pabpn17977.419ENSPMAG00000006212pabpn19966.270Petromyzon_marinus
ENSPKIG00000018052pabpn18682.524ENSPCIG00000027751-6881.818Phascolarctos_cinereus
ENSPKIG00000018052pabpn110090.171ENSPFOG00000010351pabpn19991.026Poecilia_formosa
ENSPKIG00000018052pabpn19992.641ENSPLAG00000022696pabpn110088.153Poecilia_latipinna
ENSPKIG00000018052pabpn110090.171ENSPMEG00000020856pabpn110091.026Poecilia_mexicana
ENSPKIG00000018052pabpn110090.598ENSPREG00000011278pabpn110091.453Poecilia_reticulata
ENSPKIG00000018052pabpn18283.590ENSPPYG00000005663PABPN15988.554Pongo_abelii
ENSPKIG00000018052pabpn17970.312ENSPCAG00000005902PABPN15772.024Procavia_capensis
ENSPKIG00000018052pabpn19976.395ENSPCOG00000028047BCL2L2-PABPN18476.395Propithecus_coquereli
ENSPKIG00000018052pabpn18880.383ENSPVAG00000005270PABPN16582.828Pteropus_vampyrus
ENSPKIG00000018052pabpn110094.850ENSPNYG00000013182pabpn110091.845Pundamilia_nyererei
ENSPKIG00000018052pabpn18862.500ENSPNAG00000021666pabpn1l9862.500Pygocentrus_nattereri
ENSPKIG00000018052pabpn110095.708ENSPNAG00000023526pabpn110092.704Pygocentrus_nattereri
ENSPKIG00000018052pabpn18683.010ENSRNOG00000042195Pabpn16982.297Rattus_norvegicus
ENSPKIG00000018052pabpn18872.249ENSRBIG00000042811-9567.841Rhinopithecus_bieti
ENSPKIG00000018052pabpn18971.226ENSRBIG00000039547-7669.565Rhinopithecus_bieti
ENSPKIG00000018052pabpn17685.475ENSRBIG00000040762BCL2L2-PABPN15585.475Rhinopithecus_bieti
ENSPKIG00000018052pabpn18867.943ENSRROG00000036409-8358.491Rhinopithecus_roxellana
ENSPKIG00000018052pabpn17685.475ENSRROG00000045535BCL2L2-PABPN19482.143Rhinopithecus_roxellana
ENSPKIG00000018052pabpn18871.981ENSRROG00000040409-7670.048Rhinopithecus_roxellana
ENSPKIG00000018052pabpn18178.818ENSSBOG00000026930BCL2L2-PABPN19383.439Saimiri_boliviensis_boliviensis
ENSPKIG00000018052pabpn18184.211ENSSHAG00000014841-8784.211Sarcophilus_harrisii
ENSPKIG00000018052pabpn19959.664ENSSHAG00000007707-9959.664Sarcophilus_harrisii
ENSPKIG00000018052pabpn110089.316ENSSFOG00015012565pabpn110085.897Scleropages_formosus
ENSPKIG00000018052pabpn110096.137ENSSFOG00015014718pabpn110092.704Scleropages_formosus
ENSPKIG00000018052pabpn18064.706ENSSFOG00015015833pabpn1l6775.000Scleropages_formosus
ENSPKIG00000018052pabpn110095.279ENSSMAG00000020157pabpn110091.845Scophthalmus_maximus
ENSPKIG00000018052pabpn19995.217ENSSDUG00000020582pabpn110089.510Seriola_dumerili
ENSPKIG00000018052pabpn110095.708ENSSLDG00000007118pabpn110092.275Seriola_lalandi_dorsalis
ENSPKIG00000018052pabpn17183.929ENSSPUG00000018308-9483.929Sphenodon_punctatus
ENSPKIG00000018052pabpn110093.991ENSSPAG00000021658pabpn110093.991Stegastes_partitus
ENSPKIG00000018052pabpn18682.524ENSSSCG00000002023PABPN16881.818Sus_scrofa
ENSPKIG00000018052pabpn18863.033ENSSSCG00000034805-6965.680Sus_scrofa
ENSPKIG00000018052pabpn110094.421ENSTRUG00000023664pabpn110090.987Takifugu_rubripes
ENSPKIG00000018052pabpn19289.815ENSTNIG00000005369pabpn110086.111Tetraodon_nigroviridis
ENSPKIG00000018052pabpn18682.524ENSUAMG00000024460PABPN16881.818Ursus_americanus
ENSPKIG00000018052pabpn18184.211ENSUMAG00000014288BCL2L2-PABPN15784.211Ursus_maritimus
ENSPKIG00000018052pabpn18184.211ENSVVUG00000019912BCL2L2-PABPN17682.990Vulpes_vulpes
ENSPKIG00000018052pabpn18483.249ENSXETG00000014597pabpn17377.880Xenopus_tropicalis
ENSPKIG00000018052pabpn17380.233ENSXCOG00000005158pabpn18992.763Xiphophorus_couchianus
ENSPKIG00000018052pabpn110091.026ENSXMAG00000006196pabpn110091.880Xiphophorus_maculatus

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