EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000018054 (Gene tree)
Gene ID: 111848014
Gene Symbol: CPSF7
Alias: -
Full Name: cleavage and polyadenylation specific factor 7
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Minus strand
Length: 8163 bases
Position: chrPGUA01000175.1:146161-154323
Accession: 30098
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000041556	RRM_1	PF00076.22	5e-05	1	1
ENSPKIP00000041533	RRM_1	PF00076.22	5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000022568	CPSF7-201	2690	-	ENSPKIP00000041533	455 (aa)	-	-
ENSPKIT00000022592	CPSF7-202	2878	-	ENSPKIP00000041556	454 (aa)	-	-

Gene Model

Click here to download ENSPKIG00000018054's gene model file

Pathways

Pathway ID	Pathway Name	Source
pki03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000018054's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000018054	CPSF7	65	46.875	ENSPKIG00000022613	CPSF6	61	48.023
ENSPKIG00000018054	CPSF7	75	44.503	ENSPKIG00000003081	-	64	45.198

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000018054	CPSF7	84	49.742	ENSG00000149532	CPSF7	97	58.042	Homo_sapiens
ENSPKIG00000018054	CPSF7	72	47.205	ENSG00000111605	CPSF6	85	33.981	Homo_sapiens
ENSPKIG00000018054	CPSF7	78	57.222	ENSAMEG00000016595	CPSF7	66	56.111	Ailuropoda_melanoleuca
ENSPKIG00000018054	CPSF7	80	41.489	ENSAMEG00000011781	CPSF6	63	44.633	Ailuropoda_melanoleuca
ENSPKIG00000018054	CPSF7	65	46.875	ENSACIG00000018413	cpsf6	62	46.893	Amphilophus_citrinellus
ENSPKIG00000018054	CPSF7	86	47.980	ENSAOCG00000012357	CPSF7	78	49.741	Amphiprion_ocellaris
ENSPKIG00000018054	CPSF7	65	46.250	ENSAOCG00000017865	cpsf6	64	46.893	Amphiprion_ocellaris
ENSPKIG00000018054	CPSF7	86	48.232	ENSAPEG00000015375	CPSF7	78	49.741	Amphiprion_percula
ENSPKIG00000018054	CPSF7	79	46.409	ENSACAG00000004381	CPSF6	62	46.328	Anolis_carolinensis
ENSPKIG00000018054	CPSF7	66	47.205	ENSANAG00000019240	CPSF6	58	47.458	Aotus_nancymaae
ENSPKIG00000018054	CPSF7	65	46.584	ENSACLG00000026325	cpsf6	60	46.629	Astatotilapia_calliptera
ENSPKIG00000018054	CPSF7	72	47.205	ENSBTAG00000007323	CPSF6	60	47.458	Bos_taurus
ENSPKIG00000018054	CPSF7	80	44.681	ENSCJAG00000001798	CPSF6	60	47.458	Callithrix_jacchus
ENSPKIG00000018054	CPSF7	84	49.639	ENSCJAG00000019282	CPSF7	83	46.766	Callithrix_jacchus
ENSPKIG00000018054	CPSF7	75	41.489	ENSCAFG00000000424	CPSF6	57	47.458	Canis_familiaris
ENSPKIG00000018054	CPSF7	72	47.205	ENSCAFG00020016950	CPSF6	60	47.458	Canis_lupus_dingo
ENSPKIG00000018054	CPSF7	72	47.205	ENSCHIG00000010792	CPSF6	60	47.458	Capra_hircus
ENSPKIG00000018054	CPSF7	74	44.681	ENSTSYG00000008591	CPSF6	58	48.023	Carlito_syrichta
ENSPKIG00000018054	CPSF7	72	47.826	ENSCPOG00000015201	CPSF6	60	46.893	Cavia_porcellus
ENSPKIG00000018054	CPSF7	80	44.681	ENSCCAG00000028149	CPSF6	60	47.458	Cebus_capucinus
ENSPKIG00000018054	CPSF7	80	39.512	ENSCATG00000039288	CPSF6	60	47.458	Cercocebus_atys
ENSPKIG00000018054	CPSF7	75	45.213	ENSCLAG00000010149	CPSF6	59	46.893	Chinchilla_lanigera
ENSPKIG00000018054	CPSF7	72	47.205	ENSCSAG00000004232	CPSF6	57	47.458	Chlorocebus_sabaeus
ENSPKIG00000018054	CPSF7	67	56.198	ENSCPBG00000013322	CPSF6	60	48.023	Chrysemys_picta_bellii
ENSPKIG00000018054	CPSF7	74	49.138	ENSCSAVG00000000161	-	54	50.427	Ciona_savignyi
ENSPKIG00000018054	CPSF7	66	47.205	ENSCANG00000037294	CPSF6	59	47.458	Colobus_angolensis_palliatus
ENSPKIG00000018054	CPSF7	80	44.681	ENSCGRG00001018082	Cpsf6	61	48.023	Cricetulus_griseus_chok1gshd
ENSPKIG00000018054	CPSF7	75	44.681	ENSCGRG00000016909	Cpsf6	59	48.023	Cricetulus_griseus_crigri
ENSPKIG00000018054	CPSF7	65	55.263	ENSCSEG00000008967	cpsf6	63	46.629	Cynoglossus_semilaevis
ENSPKIG00000018054	CPSF7	70	45.342	ENSCVAG00000014857	cpsf6	61	46.067	Cyprinodon_variegatus
ENSPKIG00000018054	CPSF7	88	42.822	ENSCVAG00000007392	CPSF7	81	47.644	Cyprinodon_variegatus
ENSPKIG00000018054	CPSF7	76	45.161	ENSDARG00000018618	cpsf6	61	47.126	Danio_rerio
ENSPKIG00000018054	CPSF7	84	48.615	ENSDNOG00000018517	CPSF7	83	46.766	Dasypus_novemcinctus
ENSPKIG00000018054	CPSF7	80	44.681	ENSDNOG00000015292	CPSF6	61	48.023	Dasypus_novemcinctus
ENSPKIG00000018054	CPSF7	75	44.681	ENSDORG00000002950	Cpsf6	58	48.023	Dipodomys_ordii
ENSPKIG00000018054	CPSF7	56	58.228	FBgn0035872	CG7185	66	37.900	Drosophila_melanogaster
ENSPKIG00000018054	CPSF7	58	52.564	ENSETEG00000002097	CPSF6	60	39.512	Echinops_telfairi
ENSPKIG00000018054	CPSF7	72	47.205	ENSEASG00005008066	CPSF6	60	47.458	Equus_asinus_asinus
ENSPKIG00000018054	CPSF7	72	47.205	ENSECAG00000015988	CPSF6	60	47.458	Equus_caballus
ENSPKIG00000018054	CPSF7	84	50.000	ENSECAG00000018521	CPSF7	83	48.092	Equus_caballus
ENSPKIG00000018054	CPSF7	66	47.205	ENSEEUG00000015039	CPSF6	55	47.458	Erinaceus_europaeus
ENSPKIG00000018054	CPSF7	52	70.652	ENSEEUG00000005966	-	61	70.652	Erinaceus_europaeus
ENSPKIG00000018054	CPSF7	84	50.000	ENSFCAG00000013677	CPSF7	74	65.049	Felis_catus
ENSPKIG00000018054	CPSF7	72	47.205	ENSFCAG00000002855	CPSF6	60	47.458	Felis_catus
ENSPKIG00000018054	CPSF7	75	45.213	ENSFALG00000010157	CPSF6	59	48.588	Ficedula_albicollis
ENSPKIG00000018054	CPSF7	66	47.826	ENSFDAG00000002281	CPSF6	57	46.893	Fukomys_damarensis
ENSPKIG00000018054	CPSF7	59	55.963	ENSFHEG00000019693	cpsf6	58	46.067	Fundulus_heteroclitus
ENSPKIG00000018054	CPSF7	69	51.825	ENSGMOG00000012951	cpsf6	55	53.846	Gadus_morhua
ENSPKIG00000018054	CPSF7	65	54.386	ENSGACG00000019685	cpsf6	61	45.763	Gasterosteus_aculeatus
ENSPKIG00000018054	CPSF7	67	56.198	ENSGAGG00000010228	CPSF6	60	48.023	Gopherus_agassizii
ENSPKIG00000018054	CPSF7	80	44.681	ENSGGOG00000008211	CPSF6	61	48.023	Gorilla_gorilla
ENSPKIG00000018054	CPSF7	65	46.584	ENSHBUG00000005998	cpsf6	64	46.629	Haplochromis_burtoni
ENSPKIG00000018054	CPSF7	72	47.826	ENSHGLG00000000792	CPSF6	60	46.893	Heterocephalus_glaber_female
ENSPKIG00000018054	CPSF7	66	47.826	ENSHGLG00100013861	CPSF6	60	46.893	Heterocephalus_glaber_male
ENSPKIG00000018054	CPSF7	73	48.718	ENSHCOG00000014555	cpsf6	61	46.369	Hippocampus_comes
ENSPKIG00000018054	CPSF7	74	44.681	ENSSTOG00000014133	CPSF6	59	48.023	Ictidomys_tridecemlineatus
ENSPKIG00000018054	CPSF7	75	44.681	ENSJJAG00000014647	Cpsf6	59	48.023	Jaculus_jaculus
ENSPKIG00000018054	CPSF7	76	43.085	ENSKMAG00000014794	cpsf6	65	42.289	Kryptolebias_marmoratus
ENSPKIG00000018054	CPSF7	78	48.387	ENSLBEG00000015762	cpsf6	60	42.857	Labrus_bergylta
ENSPKIG00000018054	CPSF7	80	45.213	ENSLACG00000008625	CPSF6	61	48.588	Latimeria_chalumnae
ENSPKIG00000018054	CPSF7	81	45.503	ENSLOCG00000016190	cpsf6	61	48.023	Lepisosteus_oculatus
ENSPKIG00000018054	CPSF7	72	47.205	ENSLAFG00000030413	CPSF6	60	47.458	Loxodonta_africana
ENSPKIG00000018054	CPSF7	80	44.681	ENSMFAG00000045318	CPSF6	60	47.458	Macaca_fascicularis
ENSPKIG00000018054	CPSF7	80	44.681	ENSMMUG00000002921	CPSF6	61	48.023	Macaca_mulatta
ENSPKIG00000018054	CPSF7	80	44.681	ENSMNEG00000036311	CPSF6	60	47.458	Macaca_nemestrina
ENSPKIG00000018054	CPSF7	75	38.764	ENSMLEG00000003957	CPSF6	59	47.458	Mandrillus_leucophaeus
ENSPKIG00000018054	CPSF7	65	45.342	ENSMAMG00000010385	cpsf6	64	46.067	Mastacembelus_armatus
ENSPKIG00000018054	CPSF7	65	46.584	ENSMZEG00005007975	cpsf6	64	46.629	Maylandia_zebra
ENSPKIG00000018054	CPSF7	76	45.213	ENSMGAG00000010552	CPSF6	60	48.588	Meleagris_gallopavo
ENSPKIG00000018054	CPSF7	85	55.249	ENSMGAG00000004876	CPSF7	56	63.415	Meleagris_gallopavo
ENSPKIG00000018054	CPSF7	72	47.205	ENSMAUG00000013240	Cpsf6	60	47.458	Mesocricetus_auratus
ENSPKIG00000018054	CPSF7	80	44.681	ENSMICG00000007385	-	61	48.023	Microcebus_murinus
ENSPKIG00000018054	CPSF7	80	44.681	ENSMOCG00000013982	Cpsf6	61	48.023	Microtus_ochrogaster
ENSPKIG00000018054	CPSF7	72	47.826	ENSMODG00000007123	CPSF6	60	48.023	Monodelphis_domestica
ENSPKIG00000018054	CPSF7	65	46.250	ENSMALG00000014908	cpsf6	70	46.328	Monopterus_albus
ENSPKIG00000018054	CPSF7	80	44.681	MGP_CAROLIEiJ_G0015834	Cpsf6	61	48.023	Mus_caroli
ENSPKIG00000018054	CPSF7	80	44.681	ENSMUSG00000055531	Cpsf6	61	48.023	Mus_musculus
ENSPKIG00000018054	CPSF7	71	39.512	MGP_PahariEiJ_G0031253	Cpsf6	51	43.956	Mus_pahari
ENSPKIG00000018054	CPSF7	80	44.681	MGP_SPRETEiJ_G0016657	Cpsf6	61	48.023	Mus_spretus
ENSPKIG00000018054	CPSF7	75	41.489	ENSMPUG00000017502	CPSF6	57	44.633	Mustela_putorius_furo
ENSPKIG00000018054	CPSF7	75	41.489	ENSMLUG00000004172	-	57	44.633	Myotis_lucifugus
ENSPKIG00000018054	CPSF7	80	44.681	ENSNGAG00000015901	Cpsf6	61	48.023	Nannospalax_galili
ENSPKIG00000018054	CPSF7	65	46.584	ENSNBRG00000004089	cpsf6	64	46.629	Neolamprologus_brichardi
ENSPKIG00000018054	CPSF7	80	44.681	ENSNLEG00000003798	CPSF6	60	47.458	Nomascus_leucogenys
ENSPKIG00000018054	CPSF7	72	44.242	ENSMEUG00000015041	CPSF6	57	44.199	Notamacropus_eugenii
ENSPKIG00000018054	CPSF7	66	47.205	ENSOPRG00000005199	CPSF6	55	47.458	Ochotona_princeps
ENSPKIG00000018054	CPSF7	75	45.213	ENSODEG00000004418	-	71	47.458	Octodon_degus
ENSPKIG00000018054	CPSF7	80	44.681	ENSODEG00000018399	-	61	46.893	Octodon_degus
ENSPKIG00000018054	CPSF7	58	42.614	ENSODEG00000007109	-	59	45.614	Octodon_degus
ENSPKIG00000018054	CPSF7	75	44.444	ENSONIG00000011702	cpsf6	61	46.629	Oreochromis_niloticus
ENSPKIG00000018054	CPSF7	71	46.893	ENSOANG00000005944	CPSF6	50	56.800	Ornithorhynchus_anatinus
ENSPKIG00000018054	CPSF7	72	47.205	ENSOCUG00000013505	CPSF6	57	47.458	Oryctolagus_cuniculus
ENSPKIG00000018054	CPSF7	84	48.485	ENSOCUG00000024726	CPSF7	55	62.295	Oryctolagus_cuniculus
ENSPKIG00000018054	CPSF7	70	45.625	ENSORLG00000013893	cpsf6	60	46.328	Oryzias_latipes
ENSPKIG00000018054	CPSF7	70	45.625	ENSORLG00020016593	cpsf6	60	46.328	Oryzias_latipes_hni
ENSPKIG00000018054	CPSF7	70	45.625	ENSORLG00015015558	cpsf6	60	46.328	Oryzias_latipes_hsok
ENSPKIG00000018054	CPSF7	70	45.625	ENSOMEG00000009425	cpsf6	60	46.328	Oryzias_melastigma
ENSPKIG00000018054	CPSF7	75	41.489	ENSOGAG00000031988	CPSF6	58	44.633	Otolemur_garnettii
ENSPKIG00000018054	CPSF7	84	43.038	ENSOARG00000012937	CPSF7	56	62.295	Ovis_aries
ENSPKIG00000018054	CPSF7	75	44.681	ENSOARG00000020532	CPSF6	55	48.023	Ovis_aries
ENSPKIG00000018054	CPSF7	75	44.681	ENSPPAG00000005301	CPSF6	59	48.023	Pan_paniscus
ENSPKIG00000018054	CPSF7	72	47.205	ENSPPRG00000021620	CPSF6	60	47.458	Panthera_pardus
ENSPKIG00000018054	CPSF7	84	48.821	ENSPPRG00000008538	CPSF7	75	57.778	Panthera_pardus
ENSPKIG00000018054	CPSF7	59	47.205	ENSPTIG00000004079	CPSF6	54	48.598	Panthera_tigris_altaica
ENSPKIG00000018054	CPSF7	80	44.681	ENSPTRG00000005205	CPSF6	61	48.023	Pan_troglodytes
ENSPKIG00000018054	CPSF7	76	51.034	ENSPANG00000011641	CPSF6	55	57.500	Papio_anubis
ENSPKIG00000018054	CPSF7	55	55.285	ENSPSIG00000016360	CPSF6	51	54.135	Pelodiscus_sinensis
ENSPKIG00000018054	CPSF7	75	44.681	ENSPEMG00000007973	Cpsf6	59	48.023	Peromyscus_maniculatus_bairdii
ENSPKIG00000018054	CPSF7	74	44.681	ENSPMAG00000000657	cpsf6	56	46.629	Petromyzon_marinus
ENSPKIG00000018054	CPSF7	72	47.826	ENSPCIG00000019063	CPSF6	60	48.023	Phascolarctos_cinereus
ENSPKIG00000018054	CPSF7	67	55.639	ENSPLAG00000005715	cpsf6	70	42.077	Poecilia_latipinna
ENSPKIG00000018054	CPSF7	67	48.120	ENSPMEG00000001353	cpsf6	61	46.067	Poecilia_mexicana
ENSPKIG00000018054	CPSF7	59	55.963	ENSPREG00000004417	cpsf6	57	46.067	Poecilia_reticulata
ENSPKIG00000018054	CPSF7	72	47.205	ENSPPYG00000004756	CPSF6	60	47.458	Pongo_abelii
ENSPKIG00000018054	CPSF7	72	47.205	ENSPCAG00000011574	CPSF6	57	47.458	Procavia_capensis
ENSPKIG00000018054	CPSF7	80	44.681	ENSPCOG00000024384	CPSF6	61	48.023	Propithecus_coquereli
ENSPKIG00000018054	CPSF7	72	47.500	ENSPVAG00000015753	CPSF6	57	47.159	Pteropus_vampyrus
ENSPKIG00000018054	CPSF7	65	46.584	ENSPNYG00000020315	cpsf6	60	46.629	Pundamilia_nyererei
ENSPKIG00000018054	CPSF7	76	44.681	ENSPNAG00000024098	CPSF6	61	47.159	Pygocentrus_nattereri
ENSPKIG00000018054	CPSF7	71	47.205	ENSRNOG00000005927	Cpsf6	60	47.458	Rattus_norvegicus
ENSPKIG00000018054	CPSF7	80	44.681	ENSRBIG00000042827	CPSF6	61	48.023	Rhinopithecus_bieti
ENSPKIG00000018054	CPSF7	84	49.742	ENSRBIG00000031429	CPSF7	83	47.837	Rhinopithecus_bieti
ENSPKIG00000018054	CPSF7	72	47.205	ENSRROG00000042758	CPSF6	60	47.458	Rhinopithecus_roxellana
ENSPKIG00000018054	CPSF7	75	44.681	ENSSBOG00000010652	CPSF6	55	48.023	Saimiri_boliviensis_boliviensis
ENSPKIG00000018054	CPSF7	64	41.818	ENSSHAG00000006635	CPSF6	52	48.438	Sarcophilus_harrisii
ENSPKIG00000018054	CPSF7	75	45.213	ENSSFOG00015015803	CPSF6	61	48.023	Scleropages_formosus
ENSPKIG00000018054	CPSF7	65	46.914	ENSSFOG00015001688	CPSF6	53	46.328	Scleropages_formosus
ENSPKIG00000018054	CPSF7	73	48.387	ENSSMAG00000000471	cpsf6	62	42.857	Scophthalmus_maximus
ENSPKIG00000018054	CPSF7	65	45.342	ENSSDUG00000005024	cpsf6	64	46.067	Seriola_dumerili
ENSPKIG00000018054	CPSF7	65	45.342	ENSSLDG00000009042	cpsf6	64	46.067	Seriola_lalandi_dorsalis
ENSPKIG00000018054	CPSF7	72	47.205	ENSSARG00000006743	CPSF6	60	47.458	Sorex_araneus
ENSPKIG00000018054	CPSF7	68	55.285	ENSSPUG00000001238	CPSF6	50	54.135	Sphenodon_punctatus
ENSPKIG00000018054	CPSF7	62	52.459	ENSSPAG00000013906	cpsf6	64	46.328	Stegastes_partitus
ENSPKIG00000018054	CPSF7	84	48.866	ENSSSCG00000013083	CPSF7	83	47.595	Sus_scrofa
ENSPKIG00000018054	CPSF7	72	47.205	ENSSSCG00000038031	CPSF6	60	47.458	Sus_scrofa
ENSPKIG00000018054	CPSF7	65	45.000	ENSTRUG00000016461	cpsf6	61	46.328	Takifugu_rubripes
ENSPKIG00000018054	CPSF7	65	45.000	ENSTNIG00000007576	cpsf6	64	46.328	Tetraodon_nigroviridis
ENSPKIG00000018054	CPSF7	59	47.205	ENSUAMG00000023492	CPSF6	54	48.598	Ursus_americanus
ENSPKIG00000018054	CPSF7	67	45.385	ENSUMAG00000020779	CPSF6	63	47.458	Ursus_maritimus
ENSPKIG00000018054	CPSF7	66	47.205	ENSVPAG00000008469	CPSF6	55	47.458	Vicugna_pacos
ENSPKIG00000018054	CPSF7	84	48.866	ENSVVUG00000004939	CPSF7	83	47.015	Vulpes_vulpes
ENSPKIG00000018054	CPSF7	59	47.205	ENSVVUG00000010156	-	50	48.598	Vulpes_vulpes
ENSPKIG00000018054	CPSF7	96	38.321	ENSXETG00000006715	cpsf7	60	53.788	Xenopus_tropicalis
ENSPKIG00000018054	CPSF7	59	55.963	ENSXCOG00000013423	cpsf6	61	46.067	Xiphophorus_couchianus
ENSPKIG00000018054	CPSF7	59	55.963	ENSXMAG00000003459	cpsf6	57	46.067	Xiphophorus_maculatus