EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPKIG00000018122 (Gene tree)
Gene ID: 111857227
Gene Symbol: -
Alias: -
Full Name: RNA-binding protein 38-like
Gene Type: protein_coding
Species: Paramormyrops_kingsleyae
Status: putative
Strand: Minus strand
Length: 13550 bases
Position: chrPGUA01000323.1:526670-540219
Accession: 111857227
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPKIP00000041806	RRM_1	PF00076.22	6.2e-17	1	1
ENSPKIP00000041752	RRM_1	PF00076.22	1.8e-16	1	1
ENSPKIP00000041762	RRM_1	PF00076.22	1.8e-16	1	1
ENSPKIP00000041786	RRM_1	PF00076.22	2e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPKIT00000022846	-	354	-	ENSPKIP00000041806	117 (aa)	-	-
ENSPKIT00000022826	-	687	-	ENSPKIP00000041786	228 (aa)	XP_023693618	UPI000CD61F71
ENSPKIT00000022801	-	666	-	ENSPKIP00000041762	221 (aa)	-	-
ENSPKIT00000022791	-	663	-	ENSPKIP00000041752	220 (aa)	-	-

Gene Model

Click here to download ENSPKIG00000018122's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPKIG00000018122's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPKIG00000018122	-	66	42.308	ENSPKIG00000024430	CIRBP	75	40.426
ENSPKIG00000018122	-	95	83.784	ENSPKIG00000001701	rbm24a	99	64.912
ENSPKIG00000018122	-	90	37.647	ENSPKIG00000007038	-	69	37.647
ENSPKIG00000018122	-	100	82.787	ENSPKIG00000025417	rbm38	100	70.782
ENSPKIG00000018122	-	67	38.235	ENSPKIG00000022916	hnrnpa3	52	38.235
ENSPKIG00000018122	-	89	30.667	ENSPKIG00000025512	hnrnpd	59	30.667
ENSPKIG00000018122	-	80	41.176	ENSPKIG00000003028	hnrnpa1b	56	41.176
ENSPKIG00000018122	-	67	41.176	ENSPKIG00000006240	hnrnpa1b	50	38.961
ENSPKIG00000018122	-	95	81.081	ENSPKIG00000019760	-	99	62.882
ENSPKIG00000018122	-	66	38.961	ENSPKIG00000017107	-	68	38.961
ENSPKIG00000018122	-	76	45.333	ENSPKIG00000020270	HNRNPA0	59	45.333
ENSPKIG00000018122	-	76	45.333	ENSPKIG00000020290	-	50	45.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPKIG00000018122	-	100	88.034	ENSG00000132819	RBM38	94	88.034	Homo_sapiens
ENSPKIG00000018122	-	100	86.441	ENSAPOG00000009939	-	100	74.138	Acanthochromis_polyacanthus
ENSPKIG00000018122	-	100	81.197	ENSAPOG00000003301	rbm38	98	60.643	Acanthochromis_polyacanthus
ENSPKIG00000018122	-	100	88.889	ENSACIG00000012502	-	100	88.889	Amphilophus_citrinellus
ENSPKIG00000018122	-	100	80.342	ENSACIG00000000010	rbm38	98	59.600	Amphilophus_citrinellus
ENSPKIG00000018122	-	95	90.090	ENSAOCG00000012559	RBM38	99	71.849	Amphiprion_ocellaris
ENSPKIG00000018122	-	100	81.197	ENSAOCG00000013497	-	98	60.643	Amphiprion_ocellaris
ENSPKIG00000018122	-	100	86.441	ENSAPEG00000023581	-	100	71.660	Amphiprion_percula
ENSPKIG00000018122	-	100	81.197	ENSAPEG00000013137	rbm38	98	60.643	Amphiprion_percula
ENSPKIG00000018122	-	100	82.051	ENSATEG00000016366	rbm38	99	60.851	Anabas_testudineus
ENSPKIG00000018122	-	95	90.090	ENSATEG00000016710	-	100	72.470	Anabas_testudineus
ENSPKIG00000018122	-	95	86.486	ENSACAG00000016238	RBM38	95	63.866	Anolis_carolinensis
ENSPKIG00000018122	-	100	88.034	ENSANAG00000031959	RBM38	83	92.079	Aotus_nancymaae
ENSPKIG00000018122	-	95	91.892	ENSACLG00000019514	-	100	73.279	Astatotilapia_calliptera
ENSPKIG00000018122	-	95	90.090	ENSAMXG00000015601	-	100	72.385	Astyanax_mexicanus
ENSPKIG00000018122	-	93	84.404	ENSAMXG00000038120	rbm38	99	59.916	Astyanax_mexicanus
ENSPKIG00000018122	-	100	87.179	ENSBTAG00000008105	RBM38	91	67.401	Bos_taurus
ENSPKIG00000018122	-	76	83.146	WBGene00006321	sup-12	59	83.146	Caenorhabditis_elegans
ENSPKIG00000018122	-	100	88.889	ENSCJAG00000019139	RBM38	83	92.079	Callithrix_jacchus
ENSPKIG00000018122	-	100	87.179	ENSCAFG00020021943	RBM38	91	68.282	Canis_lupus_dingo
ENSPKIG00000018122	-	100	86.325	ENSCHIG00000002609	RBM38	91	66.520	Capra_hircus
ENSPKIG00000018122	-	100	88.889	ENSCPOG00000012781	RBM38	91	67.699	Cavia_porcellus
ENSPKIG00000018122	-	100	88.889	ENSCCAG00000036872	RBM38	83	92.079	Cebus_capucinus
ENSPKIG00000018122	-	100	88.034	ENSCATG00000032133	RBM38	83	92.079	Cercocebus_atys
ENSPKIG00000018122	-	100	88.889	ENSCLAG00000005906	RBM38	95	67.699	Chinchilla_lanigera
ENSPKIG00000018122	-	100	88.034	ENSCSAG00000015503	RBM38	91	68.000	Chlorocebus_sabaeus
ENSPKIG00000018122	-	95	88.288	ENSCPBG00000024059	RBM38	99	69.725	Chrysemys_picta_bellii
ENSPKIG00000018122	-	97	67.257	ENSCANG00000030105	-	78	52.535	Colobus_angolensis_palliatus
ENSPKIG00000018122	-	100	88.034	ENSCGRG00001012928	Rbm38	89	68.182	Cricetulus_griseus_chok1gshd
ENSPKIG00000018122	-	95	77.477	ENSCSEG00000020943	rbm38	63	61.979	Cynoglossus_semilaevis
ENSPKIG00000018122	-	97	85.965	ENSCSEG00000004701	-	100	69.388	Cynoglossus_semilaevis
ENSPKIG00000018122	-	95	90.991	ENSCVAG00000005472	-	100	71.545	Cyprinodon_variegatus
ENSPKIG00000018122	-	95	81.081	ENSCVAG00000015952	rbm38	98	55.645	Cyprinodon_variegatus
ENSPKIG00000018122	-	100	82.051	ENSDARG00000058818	rbm38	100	65.966	Danio_rerio
ENSPKIG00000018122	-	100	88.034	ENSDNOG00000032004	RBM38	98	69.953	Dasypus_novemcinctus
ENSPKIG00000018122	-	79	87.097	ENSEBUG00000015164	rbm38	59	86.316	Eptatretus_burgeri
ENSPKIG00000018122	-	100	85.470	ENSECAG00000007700	RBM38	91	66.520	Equus_caballus
ENSPKIG00000018122	-	100	86.325	ENSEEUG00000013489	RBM38	92	66.667	Erinaceus_europaeus
ENSPKIG00000018122	-	100	84.615	ENSELUG00000000585	-	98	65.044	Esox_lucius
ENSPKIG00000018122	-	100	82.927	ENSELUG00000005849	-	100	73.577	Esox_lucius
ENSPKIG00000018122	-	100	87.179	ENSFCAG00000042916	RBM38	83	91.089	Felis_catus
ENSPKIG00000018122	-	95	87.387	ENSFALG00000010805	RBM38	91	73.446	Ficedula_albicollis
ENSPKIG00000018122	-	95	81.081	ENSFHEG00000017748	rbm38	98	56.627	Fundulus_heteroclitus
ENSPKIG00000018122	-	95	90.090	ENSFHEG00000006160	-	100	74.459	Fundulus_heteroclitus
ENSPKIG00000018122	-	100	87.179	ENSGMOG00000016655	-	99	79.459	Gadus_morhua
ENSPKIG00000018122	-	95	87.387	ENSGALG00000026081	RBM38	99	67.890	Gallus_gallus
ENSPKIG00000018122	-	100	80.342	ENSGACG00000015224	rbm38	99	65.000	Gasterosteus_aculeatus
ENSPKIG00000018122	-	100	82.203	ENSGACG00000009873	-	99	72.936	Gasterosteus_aculeatus
ENSPKIG00000018122	-	95	88.288	ENSGAGG00000001187	RBM38	99	69.725	Gopherus_agassizii
ENSPKIG00000018122	-	100	80.342	ENSHBUG00000012058	rbm38	98	58.800	Haplochromis_burtoni
ENSPKIG00000018122	-	95	91.892	ENSHBUG00000011778	-	100	75.105	Haplochromis_burtoni
ENSPKIG00000018122	-	100	88.889	ENSHGLG00000015077	RBM38	91	68.142	Heterocephalus_glaber_female
ENSPKIG00000018122	-	98	74.783	ENSHCOG00000019040	rbm38	77	58.462	Hippocampus_comes
ENSPKIG00000018122	-	95	89.189	ENSHCOG00000005622	-	58	77.340	Hippocampus_comes
ENSPKIG00000018122	-	95	89.189	ENSIPUG00000019349	-	100	68.465	Ictalurus_punctatus
ENSPKIG00000018122	-	91	76.415	ENSKMAG00000012402	rbm38	98	56.710	Kryptolebias_marmoratus
ENSPKIG00000018122	-	97	89.474	ENSLBEG00000016163	RBM38	100	75.949	Labrus_bergylta
ENSPKIG00000018122	-	100	81.197	ENSLBEG00000018878	rbm38	98	59.600	Labrus_bergylta
ENSPKIG00000018122	-	100	88.034	ENSLOCG00000003456	rbm38	100	78.205	Lepisosteus_oculatus
ENSPKIG00000018122	-	100	88.034	ENSMFAG00000043808	RBM38	83	92.079	Macaca_fascicularis
ENSPKIG00000018122	-	100	88.034	ENSMMUG00000031391	RBM38	83	92.079	Macaca_mulatta
ENSPKIG00000018122	-	100	88.034	ENSMNEG00000034683	RBM38	83	92.079	Macaca_nemestrina
ENSPKIG00000018122	-	95	73.874	ENSMLEG00000043261	-	90	73.874	Mandrillus_leucophaeus
ENSPKIG00000018122	-	100	80.342	ENSMAMG00000024135	rbm38	98	60.400	Mastacembelus_armatus
ENSPKIG00000018122	-	100	88.136	ENSMAMG00000020499	RBM38	100	72.245	Mastacembelus_armatus
ENSPKIG00000018122	-	100	80.342	ENSMZEG00005026036	rbm38	98	58.800	Maylandia_zebra
ENSPKIG00000018122	-	95	91.892	ENSMZEG00005000849	-	100	75.105	Maylandia_zebra
ENSPKIG00000018122	-	100	88.889	ENSMAUG00000021211	Rbm38	89	68.636	Mesocricetus_auratus
ENSPKIG00000018122	-	100	88.034	ENSMICG00000038011	RBM38	98	68.636	Microcebus_murinus
ENSPKIG00000018122	-	100	88.034	ENSMOCG00000008715	Rbm38	89	68.182	Microtus_ochrogaster
ENSPKIG00000018122	-	95	90.991	ENSMMOG00000020051	-	100	73.279	Mola_mola
ENSPKIG00000018122	-	95	87.387	ENSMODG00000016458	RBM38	93	67.265	Monodelphis_domestica
ENSPKIG00000018122	-	97	89.474	ENSMALG00000004680	RBM38	80	74.299	Monopterus_albus
ENSPKIG00000018122	-	95	81.081	ENSMALG00000022327	rbm38	98	57.806	Monopterus_albus
ENSPKIG00000018122	-	100	88.034	MGP_CAROLIEiJ_G0024745	Rbm38	89	67.273	Mus_caroli
ENSPKIG00000018122	-	100	88.034	ENSMUSG00000027510	Rbm38	89	67.273	Mus_musculus
ENSPKIG00000018122	-	100	88.034	MGP_PahariEiJ_G0026186	Rbm38	89	67.273	Mus_pahari
ENSPKIG00000018122	-	100	88.034	MGP_SPRETEiJ_G0025665	Rbm38	89	67.273	Mus_spretus
ENSPKIG00000018122	-	100	87.179	ENSMPUG00000006518	RBM38	89	74.176	Mustela_putorius_furo
ENSPKIG00000018122	-	100	85.470	ENSMLUG00000011140	RBM38	98	66.977	Myotis_lucifugus
ENSPKIG00000018122	-	95	91.892	ENSNBRG00000022545	-	100	73.279	Neolamprologus_brichardi
ENSPKIG00000018122	-	100	81.197	ENSNBRG00000022685	rbm38	98	59.200	Neolamprologus_brichardi
ENSPKIG00000018122	-	94	80.000	ENSMEUG00000005475	-	100	72.180	Notamacropus_eugenii
ENSPKIG00000018122	-	100	88.889	ENSODEG00000007980	RBM38	91	67.699	Octodon_degus
ENSPKIG00000018122	-	100	80.342	ENSONIG00000017073	rbm38	100	59.036	Oreochromis_niloticus
ENSPKIG00000018122	-	95	91.892	ENSONIG00000020324	-	100	73.171	Oreochromis_niloticus
ENSPKIG00000018122	-	95	87.387	ENSOANG00000009259	RBM38	84	65.471	Ornithorhynchus_anatinus
ENSPKIG00000018122	-	97	88.596	ENSORLG00000027180	-	100	70.281	Oryzias_latipes
ENSPKIG00000018122	-	100	76.923	ENSORLG00000012154	rbm38	93	57.203	Oryzias_latipes
ENSPKIG00000018122	-	100	77.778	ENSORLG00020017871	rbm38	93	58.051	Oryzias_latipes_hni
ENSPKIG00000018122	-	97	88.596	ENSORLG00020020751	-	100	70.281	Oryzias_latipes_hni
ENSPKIG00000018122	-	100	77.778	ENSORLG00015012606	rbm38	93	57.627	Oryzias_latipes_hsok
ENSPKIG00000018122	-	97	88.596	ENSORLG00015017040	-	100	70.565	Oryzias_latipes_hsok
ENSPKIG00000018122	-	100	78.632	ENSOMEG00000006805	rbm38	93	57.806	Oryzias_melastigma
ENSPKIG00000018122	-	97	88.596	ENSOMEG00000023912	-	100	70.850	Oryzias_melastigma
ENSPKIG00000018122	-	100	88.034	ENSOGAG00000029136	RBM38	91	67.841	Otolemur_garnettii
ENSPKIG00000018122	-	100	87.179	ENSPPRG00000009507	RBM38	83	91.089	Panthera_pardus
ENSPKIG00000018122	-	100	88.034	ENSPTRG00000045845	-	66	88.333	Pan_troglodytes
ENSPKIG00000018122	-	100	88.034	ENSPTRG00000013661	RBM38	83	92.079	Pan_troglodytes
ENSPKIG00000018122	-	91	72.897	ENSPANG00000033127	-	92	55.204	Papio_anubis
ENSPKIG00000018122	-	100	88.034	ENSPANG00000020919	-	83	92.079	Papio_anubis
ENSPKIG00000018122	-	95	87.387	ENSPSIG00000011649	RBM38	91	68.807	Pelodiscus_sinensis
ENSPKIG00000018122	-	95	84.071	ENSPMGG00000017094	-	100	66.534	Periophthalmus_magnuspinnatus
ENSPKIG00000018122	-	100	81.197	ENSPMGG00000011343	rbm38	98	56.855	Periophthalmus_magnuspinnatus
ENSPKIG00000018122	-	95	87.387	ENSPCIG00000013648	RBM38	100	64.583	Phascolarctos_cinereus
ENSPKIG00000018122	-	95	81.982	ENSPFOG00000011658	rbm38	98	57.937	Poecilia_formosa
ENSPKIG00000018122	-	95	90.991	ENSPLAG00000002500	-	100	70.445	Poecilia_latipinna
ENSPKIG00000018122	-	95	81.982	ENSPLAG00000005218	rbm38	98	57.540	Poecilia_latipinna
ENSPKIG00000018122	-	95	81.982	ENSPMEG00000015770	rbm38	98	57.937	Poecilia_mexicana
ENSPKIG00000018122	-	95	82.883	ENSPREG00000007398	rbm38	98	58.333	Poecilia_reticulata
ENSPKIG00000018122	-	100	88.034	ENSPCOG00000026201	RBM38	82	92.079	Propithecus_coquereli
ENSPKIG00000018122	-	96	45.575	ENSPVAG00000006457	RBM38	92	44.737	Pteropus_vampyrus
ENSPKIG00000018122	-	100	89.744	ENSPNYG00000019727	-	100	89.744	Pundamilia_nyererei
ENSPKIG00000018122	-	100	79.487	ENSPNYG00000021373	rbm38	98	58.400	Pundamilia_nyererei
ENSPKIG00000018122	-	99	86.207	ENSPNAG00000010596	rbm38	100	65.966	Pygocentrus_nattereri
ENSPKIG00000018122	-	100	85.470	ENSPNAG00000015123	-	91	85.470	Pygocentrus_nattereri
ENSPKIG00000018122	-	100	88.034	ENSRNOG00000006420	Rbm38	89	67.130	Rattus_norvegicus
ENSPKIG00000018122	-	97	75.221	ENSRROG00000036388	-	90	55.804	Rhinopithecus_roxellana
ENSPKIG00000018122	-	100	88.889	ENSSBOG00000031053	RBM38	93	92.079	Saimiri_boliviensis_boliviensis
ENSPKIG00000018122	-	95	96.396	ENSSFOG00015004453	rbm38	100	82.553	Scleropages_formosus
ENSPKIG00000018122	-	100	81.197	ENSSDUG00000022611	rbm38	98	61.508	Seriola_dumerili
ENSPKIG00000018122	-	95	90.991	ENSSDUG00000021082	RBM38	100	72.470	Seriola_dumerili
ENSPKIG00000018122	-	95	90.991	ENSSLDG00000011778	RBM38	100	72.874	Seriola_lalandi_dorsalis
ENSPKIG00000018122	-	100	81.197	ENSSLDG00000010845	rbm38	92	68.037	Seriola_lalandi_dorsalis
ENSPKIG00000018122	-	100	81.197	ENSSPAG00000011113	rbm38	98	60.000	Stegastes_partitus
ENSPKIG00000018122	-	95	90.090	ENSSPAG00000020989	RBM38	100	74.459	Stegastes_partitus
ENSPKIG00000018122	-	100	87.179	ENSSSCG00000007504	RBM38	91	66.520	Sus_scrofa
ENSPKIG00000018122	-	100	87.288	ENSTRUG00000019869	-	100	71.371	Takifugu_rubripes
ENSPKIG00000018122	-	100	81.197	ENSTRUG00000024954	rbm38	97	61.983	Takifugu_rubripes
ENSPKIG00000018122	-	97	90.351	ENSTNIG00000007093	-	99	74.888	Tetraodon_nigroviridis
ENSPKIG00000018122	-	100	87.179	ENSUAMG00000019780	RBM38	91	67.401	Ursus_americanus
ENSPKIG00000018122	-	100	87.179	ENSVVUG00000017246	RBM38	91	68.282	Vulpes_vulpes
ENSPKIG00000018122	-	95	84.685	ENSXETG00000011268	rbm38	99	65.022	Xenopus_tropicalis
ENSPKIG00000018122	-	95	87.069	ENSXCOG00000017324	-	70	73.457	Xiphophorus_couchianus
ENSPKIG00000018122	-	95	81.982	ENSXMAG00000023662	rbm38	98	56.400	Xiphophorus_maculatus